Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d050959_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:133502424:133505103:1 gene:Zm00001d050959 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phototropic-resoponsive NPH3 family protein
Sequence	ATGAAGTTTATGAAACTCGGCACCCGCCCGGACACCTTCTTCACCGCCGGCTCCGTGAGG TCTGTCTGCACAGAGGTGGCCACAGACCTGCAGATCCTTGTGGATAACTGCCTCTACCAT CTCCACAAGTTCCCTCTGCTCTCGAAATGCATGCTCCTGCAAGCGCTCTGCGCCGACGCC GTCGCCGGCGACGTCGTCGAGCTCCGGGGATTCCCGGGCGGCGGTGAGGCGTTCGAGGCC TGCGCCAGGTTCTGCTACGGCATCACCGTCACAGTGAGCGCGCGCAACCTCGTGCCGCTC CGGTGCGCGGCCGCGCACCTCGGGATGTCCGAGGCCACCGACAGGGGCAACCTGGCCGCC AAGCTCGACGCGTTCCTCGCCTCCTGCCTCCTCCGGCGCTGGAAGGACGCGCTGGGCGTG CTGCACTCCACGCGCCACTACGCCCCGCTCTGCGAGGACCTCGGCCTCACGTCCCGCTGC GTCGACGCCGTGGCCGCCCTCATCGCCAGCCCGGATACCGCCCTGCCGTCTAGGTCGACG TCGGCGTCGCCGTGGTGGGCGCACGACATCGCCGAGCTCGGGGTCGACCTCTTCTGGCGG ATCATAGTCGCTGTCAAGGCGACCGGTGCCATCCACGACAGGACCGTCGGCGACGCGCTC AAGGCGTACGCGCGGCGTTGGCTGCCCAACGTCGCCAAGGATGGGCACGGGCTCTCGGCG GGCCAGCCGTTCGACCACGACGCCGGCAGTGCGGTCGTGAAGCAGGTCACCACGAGGCAC CGCCTCCTGCTCGAGACGATCGTGAGCCTGCTCCCAGCGGAGAGGGACGCCGTCTCCTGC AGCTTCCTGCTCAGGCTCCTCGAGGCTGCCAACATCCTGAGCGCGTCCAAGGCGGAGCTG GTCAAGAGGGTGGCGTGGCAGCTGGAGGAGGCCAGCGTCGCCGACCTGCTGATCCCGTCG CTGTCCTGCGTCAGCGAGACGCTGTACGACGTGGACGCCGTGTCGGCCATCATCGACGAG TTCGCACTGCGGTGCGCGGCGGTCCCGCCGGCGCTGGCTCTGTCCGGGAGCCCCGACGAC AGCCCGGCGCACTCGGCCGGGCACCGGCGGTCACGTTCGGCGGAGAGCGTGAGCTTCGAC GGCACGCGACGCTCCCTGTCAGCCGCACCCGTGTCGCAGGGCGCTCTGGTGCAGGTGGGC AGGTTGGTGGACGGGTTCTTGATTGAGGCGGCAAAGGATCCCAACATGCCGCTGGACAAG CTGCTCGCCATTGCCGAGGCCGTGCCAGACAGCGCCCGGCCGGAGCACGATGGCATGTAC AAAGTCGTCGACACATACCTCAAGGCGCATCCGGAGATGAGCAAAAGCGCGAGGAAGCGG CTGTGCCGGGTGCTCAACTGCCGGAAGCTGTCGGAGAAAGCGTGCACACACGCGGCGCAG AACGAGCTCCTCCCGCTGCGCGTGGTCGTGCAGGTGCTCTTCTTCGAGCACGCGCGCGCC GCGGCGCTGGCGCCGGGCGCGCACGCCCTGGCCGCGGCTGACCTGCCGAGCAACATCCGG GCGCTGCTGTCCAAGTCCGGGTCGTCCGAGGACGAGGAGGCGGAGCGCGCCGACGAGCAG CGGCTCCGGGCGCTGGCCGCCGGCGCGTCTCCCGGCGGCGACTGGAGCGTGGAGGGCCTC CGTCGCGCCGCGTCCAAGATCGCCACGCTGCGGATGAAGCTGGCGGAGGACGAAGACCGT GACGCCGACGAGTTCGCGCGCAAGGCCGGCGTGGCGCGCAGCGCGTCGCTGCGGTTCAGG GCGTTCTGCGCCTTTCCCGCCGGGAAGCCGAAGCGGATGCTCAGCAGGCTGTGGCCGCTG GGCAGAAACGGCGTTAGCCACTAG

Peptide Sequence

PEP ID	Zm00001d050959_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:133502424:133505103:1 gene:Zm00001d050959 transcript:Zm00001d050959_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phototropic-resoponsive NPH3 family protein
Sequence	MKFMKLGTRPDTFFTAGSVRSVCTEVATDLQILVDNCLYHLHKFPLLSKCMLLQALCADA VAGDVVELRGFPGGGEAFEACARFCYGITVTVSARNLVPLRCAAAHLGMSEATDRGNLAA KLDAFLASCLLRRWKDALGVLHSTRHYAPLCEDLGLTSRCVDAVAALIASPDTALPSRST SASPWWAHDIAELGVDLFWRIIVAVKATGAIHDRTVGDALKAYARRWLPNVAKDGHGLSA GQPFDHDAGSAVVKQVTTRHRLLLETIVSLLPAERDAVSCSFLLRLLEAANILSASKAEL VKRVAWQLEEASVADLLIPSLSCVSETLYDVDAVSAIIDEFALRCAAVPPALALSGSPDD SPAHSAGHRRSRSAESVSFDGTRRSLSAAPVSQGALVQVGRLVDGFLIEAAKDPNMPLDK LLAIAEAVPDSARPEHDGMYKVVDTYLKAHPEMSKSARKRLCRVLNCRKLSEKACTHAAQ NELLPLRVVVQVLFFEHARAAALAPGAHALAAADLPSNIRALLSKSGSSEDEEAERADEQ RLRALAAGASPGGDWSVEGLRRAASKIATLRMKLAEDEDRDADEFARKAGVARSASLRFR AFCAFPAGKPKRMLSRLWPLGRNGVSH

Transcript Sequence

Transcript ID	Zm00001d050959_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:133502424:133505103:1 gene:Zm00001d050959 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phototropic-resoponsive NPH3 family protein
Sequence	GCCATTTCCAAGGGCTCTACACGAAGTTAGGCGGCCAAAGCGTTTGTAACCAACTCCTCT CCTTCTTGTCCACTGGAAAGGTTCAGACTCCCGTTTTGGCATCGCTAGCCACCGAGACAG AGAGGAGAGCTCGGCCTGGCCTGGCCTTGTCTGGCCAGGATGAAGTTTATGAAACTCGGC ACCCGCCCGGACACCTTCTTCACCGCCGGCTCCGTGAGGTCTGTCTGCACAGAGGTGGCC ACAGACCTGCAGATCCTTGTGGATAACTGCCTCTACCATCTCCACAAGTTCCCTCTGCTC TCGAAATGCATGCTCCTGCAAGCGCTCTGCGCCGACGCCGTCGCCGGCGACGTCGTCGAG CTCCGGGGATTCCCGGGCGGCGGTGAGGCGTTCGAGGCCTGCGCCAGGTTCTGCTACGGC ATCACCGTCACAGTGAGCGCGCGCAACCTCGTGCCGCTCCGGTGCGCGGCCGCGCACCTC GGGATGTCCGAGGCCACCGACAGGGGCAACCTGGCCGCCAAGCTCGACGCGTTCCTCGCC TCCTGCCTCCTCCGGCGCTGGAAGGACGCGCTGGGCGTGCTGCACTCCACGCGCCACTAC GCCCCGCTCTGCGAGGACCTCGGCCTCACGTCCCGCTGCGTCGACGCCGTGGCCGCCCTC ATCGCCAGCCCGGATACCGCCCTGCCGTCTAGGTCGACGTCGGCGTCGCCGTGGTGGGCG CACGACATCGCCGAGCTCGGGGTCGACCTCTTCTGGCGGATCATAGTCGCTGTCAAGGCG ACCGGTGCCATCCACGACAGGACCGTCGGCGACGCGCTCAAGGCGTACGCGCGGCGTTGG CTGCCCAACGTCGCCAAGGATGGGCACGGGCTCTCGGCGGGCCAGCCGTTCGACCACGAC GCCGGCAGTGCGGTCGTGAAGCAGGTCACCACGAGGCACCGCCTCCTGCTCGAGACGATC GTGAGCCTGCTCCCAGCGGAGAGGGACGCCGTCTCCTGCAGCTTCCTGCTCAGGCTCCTC GAGGCTGCCAACATCCTGAGCGCGTCCAAGGCGGAGCTGGTCAAGAGGGTGGCGTGGCAG CTGGAGGAGGCCAGCGTCGCCGACCTGCTGATCCCGTCGCTGTCCTGCGTCAGCGAGACG CTGTACGACGTGGACGCCGTGTCGGCCATCATCGACGAGTTCGCACTGCGGTGCGCGGCG GTCCCGCCGGCGCTGGCTCTGTCCGGGAGCCCCGACGACAGCCCGGCGCACTCGGCCGGG CACCGGCGGTCACGTTCGGCGGAGAGCGTGAGCTTCGACGGCACGCGACGCTCCCTGTCA GCCGCACCCGTGTCGCAGGGCGCTCTGGTGCAGGTGGGCAGGTTGGTGGACGGGTTCTTG ATTGAGGCGGCAAAGGATCCCAACATGCCGCTGGACAAGCTGCTCGCCATTGCCGAGGCC GTGCCAGACAGCGCCCGGCCGGAGCACGATGGCATGTACAAAGTCGTCGACACATACCTC AAGGCGCATCCGGAGATGAGCAAAAGCGCGAGGAAGCGGCTGTGCCGGGTGCTCAACTGC CGGAAGCTGTCGGAGAAAGCGTGCACACACGCGGCGCAGAACGAGCTCCTCCCGCTGCGC GTGGTCGTGCAGGTGCTCTTCTTCGAGCACGCGCGCGCCGCGGCGCTGGCGCCGGGCGCG CACGCCCTGGCCGCGGCTGACCTGCCGAGCAACATCCGGGCGCTGCTGTCCAAGTCCGGG TCGTCCGAGGACGAGGAGGCGGAGCGCGCCGACGAGCAGCGGCTCCGGGCGCTGGCCGCC GGCGCGTCTCCCGGCGGCGACTGGAGCGTGGAGGGCCTCCGTCGCGCCGCGTCCAAGATC GCCACGCTGCGGATGAAGCTGGCGGAGGACGAAGACCGTGACGCCGACGAGTTCGCGCGC AAGGCCGGCGTGGCGCGCAGCGCGTCGCTGCGGTTCAGGGCGTTCTGCGCCTTTCCCGCC GGGAAGCCGAAGCGGATGCTCAGCAGGCTGTGGCCGCTGGGCAGAAACGGCGTTAGCCAC TAGTAGCAGCCATGGTTAGGTACTTAGGTCCTGTGATCTCCTGCCTTTTTCTTTTCTGAG GGTGATCTGTTTGTCTCTTCTACTAGTACTTTCTCGGCTCCTCCCCTTTTGAGTTATAAT TCCAAGGCAAATTGTACCTTGCATTGCATGTAGTTGTGAATTCAATGGCAACAATAAAGA TAGAAATTGCGCTGGGAACTTACTC