Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d050938_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:132686030:132688678:1 gene:Zm00001d050938 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat family protein
Sequence	ATGCGGACTCCGGAAACCATCGGTTCGGCCCTGGCCCGCTTCGGCACGTCGCGGTCGCTG TTCGCCGGAGCGCACCTCCACTCCCACCTCCTCAAGTCCGGCCTTCTCGCCGGCTTCAGC AACCACCTCCTCACACTCTACTCCAGGTGCCGTCTACCGAGCGCAGCACGCGCGGTGTTC GACGAAATCCCCGACCCGTGCCACGTCTCCTGGTCCTCGCTCGTCACCGCCTACTCGAAC AACGGCATGCCCCGGGACGCACTCTTGGCGTTTCGGGCCATGCGCGGGCGCGGCGTCCCG TGCAACGAGTTCGCGCTCCCCGTCGTGCTCAAGTGCGCGCCGGACGTCCGGTTCGGCGCG CAGGTGCACGCGCTGGCCGTGGCCACGAGGCTCGTCCACGATGTCTTCGTCGCCAACGCG CTTGTGGCCGTGTACGGCGGGTTCGGCATGGTGGACGAGGCCAGGAGGATGTTCGACGAG TATGTAGGCGTTGGAGGGGAGAGGAATGCCGTTTCGTGGAACACCATGATATCGGCGTAC GTCAAGAACGACCAGAGCGGGGATGCCATCGGGGTGTTCCGCGAAATGGTGTGGAGCGGG GAGCGGCCGAATGAGTTCGGGTTCTCGTGCGTGGTGAACGCGTGCACGGGATCGAGGGAT TTGGAGGCTGGGAGGCAGGTGCACGGTGCAGTGGTGAGGACGGGATATGAAAAGGATGTG TTCACAGCAAATGCGCTGGTCGACATGTACTCAAAGCTGGGAGACATTGAAATGGCAGCA ACGGTTTTCGAGAAGATGCCTGCGGCGGACGTCGTCTCATGGAATGCTTTCATTTCTGGC TGTGTAACCCATGGGCATGATCACCGTGCACTGGAGCTGCTACTACAGATGAAGTCTTCA GGATTGGTGCCCAATGTGTTCACCTTATCTAGTGTTCTGAAGGCTTGTGCTGGTGCTGGT GCATTCAATTTGGGCCGGCAAATCCATGGGTTTATGGTCAAGGCCGTTGCAGATTTTGAT GAGTTTGTCGCTGTTGGCCTTGTCGACATGTACGCAAAGCATGGGTTCTTGGATGACGCA AGGAAGGTGTTTGATTTCATGCCCCGAAGGGATCTGATTTTGTGGAATGCACTGATCTCA GGCTGCTCTCATGACGGACGGCATGGTGAGGTGCTGTCACTCTTTCACAGGATGAGGAAG GAGGGGCTTGACCTTGATGTCAATAGGACGACACTAGCTTCTGTTCTCAAGTCAACGGCG AGCTCGGAAGCAATCTGTCACACAAGACAGGTTCATGCTCTTGCAGAGAAGATAGGGCTC CTATCTGACTCTCATGTCATCAATGGGCTTATTGATTCATACTGGAAGTGTGGTCAGCTA GATTATGCGATTAAGGTTTTCAAAGAAAGCCGTTCTGATGACATTATATCTTCTACAACC ATGATGACAGCTCTCTCACAGTGCGACCATGGTGAGGATGCAATAAAACTGTTTGTGCAG ATGTTAAGAAAAGGCCTTGAACCTGATTCTTTTGTACTAAGTAGCCTCCTAAATGCTTGC ACTAGTCTGTCAGCCTATGAACAAGGGAAGCAAGTGCATGCTCATCTGATTAAGAGGCAG TTCACATCAGATGTATTTGCAGGAAATGCACTTGTGTACGCTTATGCAAAGTGCGGGAGC ATAGAGGATGCAGACATGGCATTCTCTGGCCTGCCGGAGAGGGGAATTGTCTCATGGTCT GCAATGATTGGGGGGCTTGCACAGCATGGACATGGGAAGAGAGCATTGGATTTGTTCCAT AGAATGCTTGATGAGGGTGTTGCCCCAAATCACATCACGTTGACCAGTGTTCTCTCTGCT TGTAACCATGCCGGGCTTGTTGATGACGCAAAGAAATACTTTGAATCTATGAAGGAGACG TTTGGAATTGACAGGACTGAGGAACATTACGCATGCATGATTGATATTCTTGGTCGTGCA GGGAAACTAGAGGATGCTATGGAGCTTGTCAACAACATGCCATTCCAAGCAAATGCTGCA GTTTGGGGCGCACTTCTAGGAGCCTCAAGAGTACACCGAGATCCAGAACTCGGAAGGATG GCAGCTGAGAAGCTCTTCACCCTGGAGCCTGAGAAGTCTGGTACACATGTCCTGCTTGCA AACACTTATGCTTCAGCAGGCATGTGGGATGAAATGGCTAAGGTGCGAAAGCTAATGAAA GACAGCAACGTCAAGAAGGAGCCTGCCATGAGCTGGGTTGAGATAAAGGACAAGGTGCAT ACTTTCATTGTTGGCGACAAGAGCCATCCAATGACAAGAGACATATATGGAAAGCTAGCC GAATTGGGAGATTTGATGAACAAAGCTGGTTACGTTCCAAATGTGGAGGTCGATCTGCAT GATGTAGACAGAAGTGAAAAGGAGCTGCTTCTTTCTCACCACAGTGAGAGGCTGGCCGTT GCGTTTGCATTGATCAGCACCCCATCTGGGGCCCCAATCAGAGTCAAGAAGAATCTGCGC ATATGCAGAGACTGCCATGTCGCATTCAAGTACATTTCAAAGATCGTTTCAAGGGAGATT ATCATCAGAGATATCAACCGGTTCCATCATTTCACAAATGGGACATGTTCTTGCGGTGAT TATTGGTGA

Peptide Sequence

PEP ID	Zm00001d050938_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:132686030:132688678:1 gene:Zm00001d050938 transcript:Zm00001d050938_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat family protein
Sequence	MRTPETIGSALARFGTSRSLFAGAHLHSHLLKSGLLAGFSNHLLTLYSRCRLPSAARAVF DEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRFGA QVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAY VKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDV FTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSS GLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDA RKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTA SSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTT MMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQ FTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFH RMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRA GKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLA NTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLA ELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVKKNLR ICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW

Transcript Sequence

Transcript ID	Zm00001d050938_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:132686030:132688678:1 gene:Zm00001d050938 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat family protein
Sequence	ATGCGGACTCCGGAAACCATCGGTTCGGCCCTGGCCCGCTTCGGCACGTCGCGGTCGCTG TTCGCCGGAGCGCACCTCCACTCCCACCTCCTCAAGTCCGGCCTTCTCGCCGGCTTCAGC AACCACCTCCTCACACTCTACTCCAGGTGCCGTCTACCGAGCGCAGCACGCGCGGTGTTC GACGAAATCCCCGACCCGTGCCACGTCTCCTGGTCCTCGCTCGTCACCGCCTACTCGAAC AACGGCATGCCCCGGGACGCACTCTTGGCGTTTCGGGCCATGCGCGGGCGCGGCGTCCCG TGCAACGAGTTCGCGCTCCCCGTCGTGCTCAAGTGCGCGCCGGACGTCCGGTTCGGCGCG CAGGTGCACGCGCTGGCCGTGGCCACGAGGCTCGTCCACGATGTCTTCGTCGCCAACGCG CTTGTGGCCGTGTACGGCGGGTTCGGCATGGTGGACGAGGCCAGGAGGATGTTCGACGAG TATGTAGGCGTTGGAGGGGAGAGGAATGCCGTTTCGTGGAACACCATGATATCGGCGTAC GTCAAGAACGACCAGAGCGGGGATGCCATCGGGGTGTTCCGCGAAATGGTGTGGAGCGGG GAGCGGCCGAATGAGTTCGGGTTCTCGTGCGTGGTGAACGCGTGCACGGGATCGAGGGAT TTGGAGGCTGGGAGGCAGGTGCACGGTGCAGTGGTGAGGACGGGATATGAAAAGGATGTG TTCACAGCAAATGCGCTGGTCGACATGTACTCAAAGCTGGGAGACATTGAAATGGCAGCA ACGGTTTTCGAGAAGATGCCTGCGGCGGACGTCGTCTCATGGAATGCTTTCATTTCTGGC TGTGTAACCCATGGGCATGATCACCGTGCACTGGAGCTGCTACTACAGATGAAGTCTTCA GGATTGGTGCCCAATGTGTTCACCTTATCTAGTGTTCTGAAGGCTTGTGCTGGTGCTGGT GCATTCAATTTGGGCCGGCAAATCCATGGGTTTATGGTCAAGGCCGTTGCAGATTTTGAT GAGTTTGTCGCTGTTGGCCTTGTCGACATGTACGCAAAGCATGGGTTCTTGGATGACGCA AGGAAGGTGTTTGATTTCATGCCCCGAAGGGATCTGATTTTGTGGAATGCACTGATCTCA GGCTGCTCTCATGACGGACGGCATGGTGAGGTGCTGTCACTCTTTCACAGGATGAGGAAG GAGGGGCTTGACCTTGATGTCAATAGGACGACACTAGCTTCTGTTCTCAAGTCAACGGCG AGCTCGGAAGCAATCTGTCACACAAGACAGGTTCATGCTCTTGCAGAGAAGATAGGGCTC CTATCTGACTCTCATGTCATCAATGGGCTTATTGATTCATACTGGAAGTGTGGTCAGCTA GATTATGCGATTAAGGTTTTCAAAGAAAGCCGTTCTGATGACATTATATCTTCTACAACC ATGATGACAGCTCTCTCACAGTGCGACCATGGTGAGGATGCAATAAAACTGTTTGTGCAG ATGTTAAGAAAAGGCCTTGAACCTGATTCTTTTGTACTAAGTAGCCTCCTAAATGCTTGC ACTAGTCTGTCAGCCTATGAACAAGGGAAGCAAGTGCATGCTCATCTGATTAAGAGGCAG TTCACATCAGATGTATTTGCAGGAAATGCACTTGTGTACGCTTATGCAAAGTGCGGGAGC ATAGAGGATGCAGACATGGCATTCTCTGGCCTGCCGGAGAGGGGAATTGTCTCATGGTCT GCAATGATTGGGGGGCTTGCACAGCATGGACATGGGAAGAGAGCATTGGATTTGTTCCAT AGAATGCTTGATGAGGGTGTTGCCCCAAATCACATCACGTTGACCAGTGTTCTCTCTGCT TGTAACCATGCCGGGCTTGTTGATGACGCAAAGAAATACTTTGAATCTATGAAGGAGACG TTTGGAATTGACAGGACTGAGGAACATTACGCATGCATGATTGATATTCTTGGTCGTGCA GGGAAACTAGAGGATGCTATGGAGCTTGTCAACAACATGCCATTCCAAGCAAATGCTGCA GTTTGGGGCGCACTTCTAGGAGCCTCAAGAGTACACCGAGATCCAGAACTCGGAAGGATG GCAGCTGAGAAGCTCTTCACCCTGGAGCCTGAGAAGTCTGGTACACATGTCCTGCTTGCA AACACTTATGCTTCAGCAGGCATGTGGGATGAAATGGCTAAGGTGCGAAAGCTAATGAAA GACAGCAACGTCAAGAAGGAGCCTGCCATGAGCTGGGTTGAGATAAAGGACAAGGTGCAT ACTTTCATTGTTGGCGACAAGAGCCATCCAATGACAAGAGACATATATGGAAAGCTAGCC GAATTGGGAGATTTGATGAACAAAGCTGGTTACGTTCCAAATGTGGAGGTCGATCTGCAT GATGTAGACAGAAGTGAAAAGGAGCTGCTTCTTTCTCACCACAGTGAGAGGCTGGCCGTT GCGTTTGCATTGATCAGCACCCCATCTGGGGCCCCAATCAGAGTCAAGAAGAATCTGCGC ATATGCAGAGACTGCCATGTCGCATTCAAGTACATTTCAAAGATCGTTTCAAGGGAGATT ATCATCAGAGATATCAACCGGTTCCATCATTTCACAAATGGGACATGTTCTTGCGGTGAT TATTGGTGA