Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d050917_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:4:130884425:130889467:1 gene:Zm00001d050917 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycerophosphodiester phosphodiesterase GDPDL3
Sequence	ATGCCCGCAATGGGGAGGAGCAGCCGCGCCTGCTCCCTTCTTGGTTCAACTCACCTGCTC CTCCTGCTGCTGCTCTCGGTCGGCTCCGCCGTCGCCCAGAATGGCTCTACCTGGAAGACC CTGAGCGGCAAGGCTCCAGCAGTCGTTGCTAAGGGCGGGTTCTCCGGACTATTTCCCGAT TCCAGTGACTATGCTTATCAGTTTGTTGGCATATCTAGTTCCCCTGACACCACCGTGTGG TGTGATGTTCGGCTGACGAAGGATGGTGCTGGTATCTGCCTACCGAGCATAAACATGGAT AACTGCACAATAATAGCCAGTGTTTTCCCACAAGGGAAGAAGACCTACAAGGTTAATGGT GTATCTACAGCGGGCTGGTTCTCCGTAGACTATACAAGCACTGTTCTGCTGCAAAACGTA TCTTTTCCTGCAGGTTGCTTTAGTAACCTGAACACCAGCAAGATTGATCATGCTAAACCT CTAGTTATCTCGCATAATGGTGCTAGTGGTGACTACCCAGACTGCACTGACCAAGCTTAT GAAAAGGCAGTTGCCGATGGTGCGGATGTCATTGACTGTCCTGTTCAAGTGACTAAAGAT GGCATACTGATATGCATGAGCTCTGTTGACCTAATGGATGTTACTACTGTTGCAAAATCA CAATTTGCTTCGCAAGTAACTACCATCAACAGTCTGAAGGCTGGGTCTGGAGTCTTCACC TTCAACCTTACTTGGGATGATATTTCTAAGAACCTAAAGCCCATGATATCGAACCCAATG AGCACCTATAATCTGTACAGAAATCCTAGAAACAAGAACGCAGGAAACTTCATGAGATTG TCAGACTTTTTGACCTTTGCAAACGGAAAGGATTTGTCAGGAATCATGATAACTGTTGAG CATGCTGCATTCATGGCAGAGGAGCTTGGGTTTGGTGTGGTAGATGCAGTGATCAAAGCA CTTGATGACTCTGGTTATAGCAAACAGACTGCCCAGAATGTTATGATTCAGTCAACCAAC AGCTCAGTTCTGGTGAAGTTCAAGCAGGAAACCAAGTACAACCTTGTCTACATGATCGAA GAAAGTGTCCGAGATGCCGCACCTTCCTCCCTTGCGGACATTAAGAAGTTTGCTGATGCT GTTTCTGTTGGCACCACATCTGTTTTCCCGGAAACCCATTACTATTTGACAAACCAGACC AATAAGCTTGTTCCGACCCTTAAGTCTGCCGGCCTCCAAGTTTACGTTTACGTGCTCATG AATGAGTTTGCTTCCCAGCCAAATGACTTCTTCGCAGACGCCACTTCACAGATCAATGCT TATGTGCAAAGTGCTAAGGTGGATGGTGTCATCACTGATTTCCCTGGGACTGCTCACAGA TACAAACTGAACTCCTGCACGAGCATGGGAAAGAACATGCCACTATTCATGCAGCCTCCG CAACCAGGTGGCCTCCTTTCAACCATTCTCCCAGATGCACAGCCACCAGCAGCAGCGCCA ATGCCGCTCTTGACGGACGCTGACGTCGCAGAACCAGCCCTTCCTCCGGTCAGCAACACC ACCACGGCTGCATCGCCTTCGCATGCCGCCCTCAGAATGCGAACCCATGTCTTGAGCATC GCCACATTGCTGATGCTATGTGCTTCCCTCCTCATCTGA

Peptide Sequence

PEP ID	Zm00001d050917_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:4:130884425:130889467:1 gene:Zm00001d050917 transcript:Zm00001d050917_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycerophosphodiester phosphodiesterase GDPDL3
Sequence	MPAMGRSSRACSLLGSTHLLLLLLLSVGSAVAQNGSTWKTLSGKAPAVVAKGGFSGLFPD SSDYAYQFVGISSSPDTTVWCDVRLTKDGAGICLPSINMDNCTIIASVFPQGKKTYKVNG VSTAGWFSVDYTSTVLLQNVSFPAGCFSNLNTSKIDHAKPLVISHNGASGDYPDCTDQAY EKAVADGADVIDCPVQVTKDGILICMSSVDLMDVTTVAKSQFASQVTTINSLKAGSGVFT FNLTWDDISKNLKPMISNPMSTYNLYRNPRNKNAGNFMRLSDFLTFANGKDLSGIMITVE HAAFMAEELGFGVVDAVIKALDDSGYSKQTAQNVMIQSTNSSVLVKFKQETKYNLVYMIE ESVRDAAPSSLADIKKFADAVSVGTTSVFPETHYYLTNQTNKLVPTLKSAGLQVYVYVLM NEFASQPNDFFADATSQINAYVQSAKVDGVITDFPGTAHRYKLNSCTSMGKNMPLFMQPP QPGGLLSTILPDAQPPAAAPMPLLTDADVAEPALPPVSNTTTAASPSHAALRMRTHVLSI ATLLMLCASLLI

Transcript Sequence

Transcript ID	Zm00001d050917_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:130884425:130889467:1 gene:Zm00001d050917 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycerophosphodiester phosphodiesterase GDPDL3
Sequence	GCGCATTGCCCCCCTCCTCCCTGTCTCGTCTCCTCGTCGTGGCCACCTCTTCCTCTGCTC CCCCTTCCAGGGGTCGTTCTTGGAGCCCCAGTTCCTCGAGCTGCGTCCGCCGGTGGTCGC GTAGGTGGCGGATGCCCGCAATGGGGAGGAGCAGCCGCGCCTGCTCCCTTCTTGGTTCAA CTCACCTGCTCCTCCTGCTGCTGCTCTCGGTCGGCTCCGCCGTCGCCCAGAATGGCTCTA CCTGGAAGACCCTGAGCGGCAAGGCTCCAGCAGTCGTTGCTAAGGGCGGGTTCTCCGGAC TATTTCCCGATTCCAGTGACTATGCTTATCAGTTTGTTGGCATATCTAGTTCCCCTGACA CCACCGTGTGGTGTGATGTTCGGCTGACGAAGGATGGTGCTGGTATCTGCCTACCGAGCA TAAACATGGATAACTGCACAATAATAGCCAGTGTTTTCCCACAAGGGAAGAAGACCTACA AGGTTAATGGTGTATCTACAGCGGGCTGGTTCTCCGTAGACTATACAAGCACTGTTCTGC TGCAAAACGTATCTTTTCCTGCAGGTTGCTTTAGTAACCTGAACACCAGCAAGATTGATC ATGCTAAACCTCTAGTTATCTCGCATAATGGTGCTAGTGGTGACTACCCAGACTGCACTG ACCAAGCTTATGAAAAGGCAGTTGCCGATGGTGCGGATGTCATTGACTGTCCTGTTCAAG TGACTAAAGATGGCATACTGATATGCATGAGCTCTGTTGACCTAATGGATGTTACTACTG TTGCAAAATCACAATTTGCTTCGCAAGTAACTACCATCAACAGTCTGAAGGCTGGGTCTG GAGTCTTCACCTTCAACCTTACTTGGGATGATATTTCTAAGAACCTAAAGCCCATGATAT CGAACCCAATGAGCACCTATAATCTGTACAGAAATCCTAGAAACAAGAACGCAGGAAACT TCATGAGATTGTCAGACTTTTTGACCTTTGCAAACGGAAAGGATTTGTCAGGAATCATGA TAACTGTTGAGCATGCTGCATTCATGGCAGAGGAGCTTGGGTTTGGTGTGGTAGATGCAG TGATCAAAGCACTTGATGACTCTGGTTATAGCAAACAGACTGCCCAGAATGTTATGATTC AGTCAACCAACAGCTCAGTTCTGGTGAAGTTCAAGCAGGAAACCAAGTACAACCTTGTCT ACATGATCGAAGAAAGTGTCCGAGATGCCGCACCTTCCTCCCTTGCGGACATTAAGAAGT TTGCTGATGCTGTTTCTGTTGGCACCACATCTGTTTTCCCGGAAACCCATTACTATTTGA CAAACCAGACCAATAAGCTTGTTCCGACCCTTAAGTCTGCCGGCCTCCAAGTTTACGTTT ACGTGCTCATGAATGAGTTTGCTTCCCAGCCAAATGACTTCTTCGCAGACGCCACTTCAC AGATCAATGCTTATGTGCAAAGTGCTAAGGTGGATGGTGTCATCACTGATTTCCCTGGGA CTGCTCACAGATACAAACTGAACTCCTGCACGAGCATGGGAAAGAACATGCCACTATTCA TGCAGCCTCCGCAACCAGGTGGCCTCCTTTCAACCATTCTCCCAGATGCACAGCCACCAG CAGCAGCGCCAATGCCGCTCTTGACGGACGCTGACGTCGCAGAACCAGCCCTTCCTCCGG TCAGCAACACCACCACGGCTGCATCGCCTTCGCATGCCGCCCTCAGAATGCGAACCCATG TCTTGAGCATCGCCACATTGCTGATGCTATGTGCTTCCCTCCTCATCTGAAGATAGTCCT GCTCAACATCATACGCGGCGTGGCGCATTAGAGCTGAGGATTTTCACATTGAGCTGCTAA TAGCAATTCTTTCCACCACCTTTATGTAGCTATTTTTTTCTTGTTCTGTCCGGTGTTTTG GAGGATGGATGGATGTTCAGCTTGATACCTCAAAGGTGGCACTTGAGCGTGCTGCCAGCT GTCTCTAGGTACATTTTGGT