Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d050914_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:130551672:130554134:-1 gene:Zm00001d050914 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCATCCCCTCCGCCCTCTCCATCTCCCGCCGCGCTCATCGCGCATCTCGCCGCTGTG CTCTCCTCCCCGGACTGGCGCTTCCACCCCTCGCTCCCGCAACTCCCTGCCCTCCTCGCG CCGTCCCTACCCCGCACACTCCTCGTCCCGTTGCCGCTCCGCCTCGCGGCCGCAGTCGCC CGCGCCGCCGCGCCGTCCCGCCACCTCCTCGACATCTCACTCCCGGTCGTGCTCCGCCTC CACGCCCTCTCCCCGCCGCCGCTCCGTCCATTCTTCGACCGTCCCTTCCGCTCCCTCCTC ACCCACTTCTCCCGCTACGCGCTGACGCCGCTCATGCTCCGGCTGTTCGCCCACATGTAC CGCCACGCCCCGCCTGCACCCACGGGTGCTACCTACAATGCACTCATCCGTGCCCTCTGC CGCCGCGCCGATCTCCGCCACGCCCAACGGTACCTCAGCCTCATGGTCCGCTCCGGTTGG CGCCCCGACGCTTTCACGTTCAACTCTTTGATATTGGGTTACTGTCGCACGCAGCAGCTG GAAGTGGCCCATGACTTGTTCTGCAAAATGCCGTTCAGAGGATTCTCACAAGATGCGGTT TCTTACGCTGCTCTGATCGAAGGATTTTGTGAGGCAGGCAGGATCGATGAGGCACTGGAG TTGTTCAGGGAAATGACGCAACCAGACATGTACACACACGCGGCCTTGGTAAAGGGGCTG TGTGATGCCGGAAGAGGAGAGGAGGGTCTATGTATGCTGCAGAAGATGAAGGAGCTGGGA TGGAGGCCAACCACTCGTGCATATGCAGCACTGGTCGATTTATGGTGTAGGGAGCAGAAG GCTGAAGAGGCTGAGAAAATACTGAATGAGATGTTTGACAGTGGGTTGATGCCTTGTGTT GTAACATGCACAATTGTCGTGAATGCCTACTGCAGGGAGGGGAGGATGAGTGGTGCAGTG AGGGTGTTTGAATCCATGAGGTTTAAAGGGTGTGAACCAAATGTCTGGACATACAATGCA ATTGTGCAAGGTTTCTGTAATGCTGGGAAAGTGTACAAAGCAATGGCTTTGTTGGACCAG ATGAGAGAATGTGGAGTAGAGCCAGATGTTGTGACATACAATTTGTTGATTCGAGGCCAG TGCATTGATGGTCATATAGGAAGCGCTTTCAGATTACTCCGTTTGATGGAAGGAAATGGT TTAGCTGCTGATCAGTACACTTACAATGTGTTGATTGATGCTCTGTGTAAGACTGGGAAA GTTGATGAAGCTTGCTCTCTTTTTGATGGCCTAGAATATAGAGGCATAAGACCTAATTCT GTGACATTCAATACGGTGATAAATGGGTTATGCAAGGCTGGTAAATTCGATGTTGCGTGC ACATTTTTGGAAAATATGATTTCAGCTGGTTATGCACCAGATACCTATACATATAGCCCA TTCATTGAAAATCTATGCAAGACGAAGGGATCACAAGAAGGATTATTCTTTATAGATGAG ATGCTACAAAAAGATGTCAAGCCTTCAACGGTGAATTATACAATTGTAATCAACAGACTT TTCAACGAGAGGAACTATGGGTTAGCCACAAGGATTTGGGGGCAAATGGTGTCACAGGGG TGTAGTCCTGATGTTGTCACTTATACTACTTCTGTGCGGGCATACTGCAATGAAGGCAGG CTTGATGAAGCAGAAAATGTTGTGACGGAGATGAAAAAATGTAGGACCATTGTAGATGCA ATGGCATATAACACTTTGATTGATGGCCATACAAGTATTGGACAGACAGATCGTGCAGTT ACAATCTTGAAGCACATGACGGGTGTTGCTTCTATGCCAAATCATTTTACCTTTTTTATC TTGCTTAGACATCTTTTACAGAGGAGGCTAGCAGAACATGTACCTTTGAAAGCAACTTCT GTGTGGAAGACTATAGAGCTTGCTGATGTCTTTGAATTATTTGAGCTAATGAAGAAGAAC AGCGTCCCTTCTAGTGCAAGAACTTATTTGTCCATTCTGGAGGGGTTTTCTGAAGAAAGA AGATTGGATGAGGTGACTTCCTTGGTTTCTCTTATGAAAGAAGAGAATCTACCTCTGAAT GAAGATATATACAATGCTCTTGTTAATTGCTTTTGCAAATTAAGGATGTATTCTGATGCT TGGGCATTGCTTTGTTCCATGATTGGACATGGTTTTTTACCAAACTTAATATTTTACCAG TATCTGCTTTCTGGGCTTACTGCTGAGGGACAAGCAGATAGGGCTAAAGAAATTTTCAGA AGTTCGAGATGGAAAGAGTACAATACCGATGAAATTGTATGGAAAGTTATAATTGATGGC TTCATAAGGAAGGGTCATGCAGATATGTGCCATGACATGATATCCATGTTAGAACAGATG AAATGCAAACCAAGTGATGAAACATATGCAATGCTGACAGAGGAATTGCCCACCAGGGAA TAG

Peptide Sequence

PEP ID	Zm00001d050914_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:130551672:130554134:-1 gene:Zm00001d050914 transcript:Zm00001d050914_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MASPPPSPSPAALIAHLAAVLSSPDWRFHPSLPQLPALLAPSLPRTLLVPLPLRLAAAVA RAAAPSRHLLDISLPVVLRLHALSPPPLRPFFDRPFRSLLTHFSRYALTPLMLRLFAHMY RHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQL EVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGL CDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCV VTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQ MRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGK VDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSP FIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQG CSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAV TILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKN SVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDA WALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDG FIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEELPTRE

Transcript Sequence

Transcript ID	Zm00001d050914_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:130551672:130554134:-1 gene:Zm00001d050914 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCATCCCCTCCGCCCTCTCCATCTCCCGCCGCGCTCATCGCGCATCTCGCCGCTGTG CTCTCCTCCCCGGACTGGCGCTTCCACCCCTCGCTCCCGCAACTCCCTGCCCTCCTCGCG CCGTCCCTACCCCGCACACTCCTCGTCCCGTTGCCGCTCCGCCTCGCGGCCGCAGTCGCC CGCGCCGCCGCGCCGTCCCGCCACCTCCTCGACATCTCACTCCCGGTCGTGCTCCGCCTC CACGCCCTCTCCCCGCCGCCGCTCCGTCCATTCTTCGACCGTCCCTTCCGCTCCCTCCTC ACCCACTTCTCCCGCTACGCGCTGACGCCGCTCATGCTCCGGCTGTTCGCCCACATGTAC CGCCACGCCCCGCCTGCACCCACGGGTGCTACCTACAATGCACTCATCCGTGCCCTCTGC CGCCGCGCCGATCTCCGCCACGCCCAACGGTACCTCAGCCTCATGGTCCGCTCCGGTTGG CGCCCCGACGCTTTCACGTTCAACTCTTTGATATTGGGTTACTGTCGCACGCAGCAGCTG GAAGTGGCCCATGACTTGTTCTGCAAAATGCCGTTCAGAGGATTCTCACAAGATGCGGTT TCTTACGCTGCTCTGATCGAAGGATTTTGTGAGGCAGGCAGGATCGATGAGGCACTGGAG TTGTTCAGGGAAATGACGCAACCAGACATGTACACACACGCGGCCTTGGTAAAGGGGCTG TGTGATGCCGGAAGAGGAGAGGAGGGTCTATGTATGCTGCAGAAGATGAAGGAGCTGGGA TGGAGGCCAACCACTCGTGCATATGCAGCACTGGTCGATTTATGGTGTAGGGAGCAGAAG GCTGAAGAGGCTGAGAAAATACTGAATGAGATGTTTGACAGTGGGTTGATGCCTTGTGTT GTAACATGCACAATTGTCGTGAATGCCTACTGCAGGGAGGGGAGGATGAGTGGTGCAGTG AGGGTGTTTGAATCCATGAGGTTTAAAGGGTGTGAACCAAATGTCTGGACATACAATGCA ATTGTGCAAGGTTTCTGTAATGCTGGGAAAGTGTACAAAGCAATGGCTTTGTTGGACCAG ATGAGAGAATGTGGAGTAGAGCCAGATGTTGTGACATACAATTTGTTGATTCGAGGCCAG TGCATTGATGGTCATATAGGAAGCGCTTTCAGATTACTCCGTTTGATGGAAGGAAATGGT TTAGCTGCTGATCAGTACACTTACAATGTGTTGATTGATGCTCTGTGTAAGACTGGGAAA GTTGATGAAGCTTGCTCTCTTTTTGATGGCCTAGAATATAGAGGCATAAGACCTAATTCT GTGACATTCAATACGGTGATAAATGGGTTATGCAAGGCTGGTAAATTCGATGTTGCGTGC ACATTTTTGGAAAATATGATTTCAGCTGGTTATGCACCAGATACCTATACATATAGCCCA TTCATTGAAAATCTATGCAAGACGAAGGGATCACAAGAAGGATTATTCTTTATAGATGAG ATGCTACAAAAAGATGTCAAGCCTTCAACGGTGAATTATACAATTGTAATCAACAGACTT TTCAACGAGAGGAACTATGGGTTAGCCACAAGGATTTGGGGGCAAATGGTGTCACAGGGG TGTAGTCCTGATGTTGTCACTTATACTACTTCTGTGCGGGCATACTGCAATGAAGGCAGG CTTGATGAAGCAGAAAATGTTGTGACGGAGATGAAAAAATGTAGGACCATTGTAGATGCA ATGGCATATAACACTTTGATTGATGGCCATACAAGTATTGGACAGACAGATCGTGCAGTT ACAATCTTGAAGCACATGACGGGTGTTGCTTCTATGCCAAATCATTTTACCTTTTTTATC TTGCTTAGACATCTTTTACAGAGGAGGCTAGCAGAACATGTACCTTTGAAAGCAACTTCT GTGTGGAAGACTATAGAGCTTGCTGATGTCTTTGAATTATTTGAGCTAATGAAGAAGAAC AGCGTCCCTTCTAGTGCAAGAACTTATTTGTCCATTCTGGAGGGGTTTTCTGAAGAAAGA AGATTGGATGAGGTGACTTCCTTGGTTTCTCTTATGAAAGAAGAGAATCTACCTCTGAAT GAAGATATATACAATGCTCTTGTTAATTGCTTTTGCAAATTAAGGATGTATTCTGATGCT TGGGCATTGCTTTGTTCCATGATTGGACATGGTTTTTTACCAAACTTAATATTTTACCAG TATCTGCTTTCTGGGCTTACTGCTGAGGGACAAGCAGATAGGGCTAAAGAAATTTTCAGA AGTTCGAGATGGAAAGAGTACAATACCGATGAAATTGTATGGAAAGTTATAATTGATGGC TTCATAAGGAAGGGTCATGCAGATATGTGCCATGACATGATATCCATGTTAGAACAGATG AAATGCAAACCAAGTGATGAAACATATGCAATGCTGACAGAGGAATTGCCCACCAGGGAA TAG