Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d050850_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:4:126960281:126962597:1 gene:Zm00001d050850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cryptochrome 2
Sequence	ATGTTCGCGCCATTCTGGAACAGGTGCCTGTGCATGCCGGACCCTGCCGCACCACTGCTG CCGCCCAAGAGGATCAATTCAGGTGACCTGTCGAGGTGTCCGTGGGACGAGCTCATCTTT GAAGACGAGTCCGAGAAGGGCAGCAATGCGCTGCTCGCACGAGCGTGGTCACCAGGGTGG CAGAACGCTGACAAGGCGCTAACGGCCTTCCTCGACGGTCCGCTGGTCGACTACTCCGCG AACCACAAGAAGGCCGACAGCGCCAGCACGTCCCTGCTGTCTCCGTACCTGCACTTCGGC GAGCTCAGCGTCCGCAAGGTCTTCCACCAGGTGCGGATGAAGCAGCTGATGTGGAGCAAC GACGGCGACCGCGCCGGCGAGGAGAGCTGCACGCTATTCCTCCGCGCCATCGGCCTGCGG GAGTACTCGAGGTACCTCACCTTCAACCACCCCTGCAGCCTTGAGAAGCCCCTTCTGTCG CACCTCAGGTTCTTCCCCTGGGTCGTCGATGAGGTGCACTTCAAGGTCTGGAGACAAGGG AGGACTGGCTACCCTCTTGTCGACGCTGGCATGAGGGAGCTCTGGGCCACCGGCTGGGTT CACGACCGGATACGTGTCGTTGTCTCTAGCTTCTTCGTCAAGGTGCTCCAGCTGCCATGG CGCTGGGGCATGAAGTACTTCTGGGACACCTTGCTGGATGCTGACCTTGAGAGTGACGCA CTAGGCTGGCAGTACATTTCTGGGTCTCTCCCTGATGGCCGTGAGCTTGACCGCATTGAC AACCCTCAGTTTGAAGGGTACAAGTTTGATCCGCACGGGGAGTACGTACGGCGATGGCTA CCGGAGCTGGCGAGGCTGCCGACGGAATGGATACACCACCCCTGGGATGCACCTGAGTCT GTGCTTCAGGCTGCAGGAGTCGAGCTAGGCTCCAACTACCCACGCCCCATTGTGGAGTTA GATGCAGCCAATTCCAGGTTGCAGGGTGCCCTGTCAGAGATGTGGGAGCTTGAGGCAGCC TCTTGTGCTGCCATCGAGAACGGGATGGAAGAAGGCCTCGGCGATTCCACAGATGAGCCG CCGATCGACTTCCCTCAAGAATTACGGATGGAAGTGGACCGACAACCAGCTCAACCTGCT ATCATCCACACGCCGGTAGTGGCTGGTTGGAGACGAGAAGACCAGAGGGTGCCTAGCATG ACTTCCTCGTTAATTAGAGCTGAGACCGAACTCACTGCAGACTTTGGCAACACCAGTGAG GACAGTAGGCCAGAAGTGCCGTCAAACATTCATCTGCAGGCTCGGGCGGAGAGGGAAGAA ACAGTTGACGGTGCCACTGGCAATACTGTCAGGGTGAATGGCAACCAACAGCAGCAGAAT CTTCAGAACAACATGCACCGCGTGCTAGGTATCGCTCCATCAATTTCAGAGGCATCGAGC AGCTGGACGGGTAGGGAAGGTGGATTGGTACCGGTCTGGTCACCTCCGGCAGCTTCAGTA CATTCTGATCCATATACTGCCGACGAGGCTGACATTTCGAGTAGGAGTTATTTGGACAGG CATCAGCAATCAAATACGATGATGAACTGGAGTCAACTCTCTCAGTCATTGACAACAGGA TGGGAAGTGGATAATTAG

Peptide Sequence

PEP ID	Zm00001d050850_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:4:126960281:126962597:1 gene:Zm00001d050850 transcript:Zm00001d050850_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cryptochrome 2
Sequence	MFAPFWNRCLCMPDPAAPLLPPKRINSGDLSRCPWDELIFEDESEKGSNALLARAWSPGW QNADKALTAFLDGPLVDYSANHKKADSASTSLLSPYLHFGELSVRKVFHQVRMKQLMWSN DGDRAGEESCTLFLRAIGLREYSRYLTFNHPCSLEKPLLSHLRFFPWVVDEVHFKVWRQG RTGYPLVDAGMRELWATGWVHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDA LGWQYISGSLPDGRELDRIDNPQFEGYKFDPHGEYVRRWLPELARLPTEWIHHPWDAPES VLQAAGVELGSNYPRPIVELDAANSRLQGALSEMWELEAASCAAIENGMEEGLGDSTDEP PIDFPQELRMEVDRQPAQPAIIHTPVVAGWRREDQRVPSMTSSLIRAETELTADFGNTSE DSRPEVPSNIHLQARAEREETVDGATGNTVRVNGNQQQQNLQNNMHRVLGIAPSISEASS SWTGREGGLVPVWSPPAASVHSDPYTADEADISSRSYLDRHQQSNTMMNWSQLSQSLTTG WEVDN

Transcript Sequence

Transcript ID	Zm00001d050850_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:126960281:126962597:1 gene:Zm00001d050850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cryptochrome 2
Sequence	GGCCCGGTTGACACGAACGGTCCTCGATTCCTCACCGATCGCTGTCTCGTGCCCGCCGTG CAGACCCGCTATCGCTGGTCCGGGACCACCGCGTGAAGGAGCAGCTGTCGGCGGAGGGCA TCACTGTGCAGTCCTTCAACGCCGATCTGCTGTACGAGCCGTGGGAGGTCCTCGACGACG ACGGCTTCCCCTTCACCATGTTCGCGCCATTCTGGAACAGGTGCCTGTGCATGCCGGACC CTGCCGCACCACTGCTGCCGCCCAAGAGGATCAATTCAGGTGACCTGTCGAGGTGTCCGT GGGACGAGCTCATCTTTGAAGACGAGTCCGAGAAGGGCAGCAATGCGCTGCTCGCACGAG CGTGGTCACCAGGGTGGCAGAACGCTGACAAGGCGCTAACGGCCTTCCTCGACGGTCCGC TGGTCGACTACTCCGCGAACCACAAGAAGGCCGACAGCGCCAGCACGTCCCTGCTGTCTC CGTACCTGCACTTCGGCGAGCTCAGCGTCCGCAAGGTCTTCCACCAGGTGCGGATGAAGC AGCTGATGTGGAGCAACGACGGCGACCGCGCCGGCGAGGAGAGCTGCACGCTATTCCTCC GCGCCATCGGCCTGCGGGAGTACTCGAGGTACCTCACCTTCAACCACCCCTGCAGCCTTG AGAAGCCCCTTCTGTCGCACCTCAGGTTCTTCCCCTGGGTCGTCGATGAGGTGCACTTCA AGGTCTGGAGACAAGGGAGGACTGGCTACCCTCTTGTCGACGCTGGCATGAGGGAGCTCT GGGCCACCGGCTGGGTTCACGACCGGATACGTGTCGTTGTCTCTAGCTTCTTCGTCAAGG TGCTCCAGCTGCCATGGCGCTGGGGCATGAAGTACTTCTGGGACACCTTGCTGGATGCTG ACCTTGAGAGTGACGCACTAGGCTGGCAGTACATTTCTGGGTCTCTCCCTGATGGCCGTG AGCTTGACCGCATTGACAACCCTCAGTTTGAAGGGTACAAGTTTGATCCGCACGGGGAGT ACGTACGGCGATGGCTACCGGAGCTGGCGAGGCTGCCGACGGAATGGATACACCACCCCT GGGATGCACCTGAGTCTGTGCTTCAGGCTGCAGGAGTCGAGCTAGGCTCCAACTACCCAC GCCCCATTGTGGAGTTAGATGCAGCCAATTCCAGGTTGCAGGGTGCCCTGTCAGAGATGT GGGAGCTTGAGGCAGCCTCTTGTGCTGCCATCGAGAACGGGATGGAAGAAGGCCTCGGCG ATTCCACAGATGAGCCGCCGATCGACTTCCCTCAAGAATTACGGATGGAAGTGGACCGAC AACCAGCTCAACCTGCTATCATCCACACGCCGGTAGTGGCTGGTTGGAGACGAGAAGACC AGAGGGTGCCTAGCATGACTTCCTCGTTAATTAGAGCTGAGACCGAACTCACTGCAGACT TTGGCAACACCAGTGAGGACAGTAGGCCAGAAGTGCCGTCAAACATTCATCTGCAGGCTC GGGCGGAGAGGGAAGAAACAGTTGACGGTGCCACTGGCAATACTGTCAGGGTGAATGGCA ACCAACAGCAGCAGAATCTTCAGAACAACATGCACCGCGTGCTAGGTATCGCTCCATCAA TTTCAGAGGCATCGAGCAGCTGGACGGGTAGGGAAGGTGGATTGGTACCGGTCTGGTCAC CTCCGGCAGCTTCAGTACATTCTGATCCATATACTGCCGACGAGGCTGACATTTCGAGTA GGAGTTATTTGGACAGGCATCAGCAATCAAATACGATGATGAACTGGAGTCAACTCTCTC AGTCATTGACAACAGGATGGGAAGTGGATAATTAGTGCTGTGTGACCGGATTTAATTGAT TAGGAGTTCGGCAGAGAGAATTATATTATACATATGTAAATTATCACATTTTGTTCGTCT ATATAGCCTTGGTGTGCATGC