Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d050816_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:4:124419733:124423060:1 gene:Zm00001d050816 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Alfin-like-transcription factor 7 description:PHD finger protein

Sequence

ATGGACGGCGACAGAGAAGGCGCTGCGGCGGTGCACCACCACGCGCGCTCCCCCGAGGAC
GTCTTCCGCGATTTCCGCGCGCGCCGCGCCGGCATCGTCAAGGCACTCACCACGGGTCAG
CTTGTCTCACGCATTTCCTGCCTCCTCCTGTTTGTCCTCTTGGTTTGTGGATGCTTCTCT
GATGCTACAGCTGCTTCCGTGGTGCGCGCAGATGTGGAGAAGTTCTATCAGCAGTGCGAT
CCAGAGAAAGAGAACTTGTGCCTTTATGGTTTGCCAAATGAGACTTGGGAGGTTACTCTT
CCAGCTGAGGAAGTACCTCCTGAGCTTCCAGAACCAGCACTGGGCATAAACTTTGCCCGT
GATGGAATGGTTGAAAAAGACTGGTTGTCTCTAGTTGCAGTTCATAGTGATGCGTGGCTC
CTGTCTGTTGCATTCTACTTTGGAGCTCGCTTTGGATTTGATAAAGATGCAAGGAGAAGG
CTCTTCACCATGATTAATAACCTGCCCACTGTTTATGAAGTTGTGACCGGGGTTGCTAAG
AAGCAATCAAAAGCCCCCAACGGCAGCAGCAAAAGCAGCAAATCTAACTCTAAACCATCA
AAACAGATCAATTCTAACAGTAAGCCTGTGAAGCCAGCCCACCCAAACGAAGAGGAGGAT
AGCGGCCGTGAGGACGCAGAGGAGGACCAGGCGTACCTGTGTGGGTCCTGTGGGGAAAGC
TATGCGAATGGGGAGTTCTGGATCTGCTGCGATATCTGCGAGAAGTGGTTCCATGGCAAG
TGTGTCCGCATCACCCCTGCAAAGGCAGAGCACATCAAGCAGTACAAGTGTCCCAGCTGC
AGCACCAAGCGGAGCCGGGAATGA

Peptide Sequence

PEP ID

Zm00001d050816_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:4:124419733:124423060:1 gene:Zm00001d050816 transcript:Zm00001d050816_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Alfin-like-transcription factor 7 description:PHD finger protein

Sequence

MDGDREGAAAVHHHARSPEDVFRDFRARRAGIVKALTTGQLVSRISCLLLFVLLVCGCFS
DATAASVVRADVEKFYQQCDPEKENLCLYGLPNETWEVTLPAEEVPPELPEPALGINFAR
DGMVEKDWLSLVAVHSDAWLLSVAFYFGARFGFDKDARRRLFTMINNLPTVYEVVTGVAK
KQSKAPNGSSKSSKSNSKPSKQINSNSKPVKPAHPNEEEDSGREDAEEDQAYLCGSCGES
YANGEFWICCDICEKWFHGKCVRITPAKAEHIKQYKCPSCSTKRSRE

Transcript Sequence

Transcript ID

Zm00001d050816_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:124419733:124423060:1 gene:Zm00001d050816 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Alfin-like-transcription factor 7 description:PHD finger protein

Sequence

ATGGACGGCGACAGAGAAGGCGCTGCGGCGGTGCACCACCACGCGCGCTCCCCCGAGGAC
GTCTTCCGCGATTTCCGCGCGCGCCGCGCCGGCATCGTCAAGGCACTCACCACGGGTCAG
CTTGTCTCACGCATTTCCTGCCTCCTCCTGTTTGTCCTCTTGGTTTGTGGATGCTTCTCT
GATGCTACAGCTGCTTCCGTGGTGCGCGCAGATGTGGAGAAGTTCTATCAGCAGTGCGAT
CCAGAGAAAGAGAACTTGTGCCTTTATGGTTTGCCAAATGAGACTTGGGAGGTTACTCTT
CCAGCTGAGGAAGTACCTCCTGAGCTTCCAGAACCAGCACTGGGCATAAACTTTGCCCGT
GATGGAATGGTTGAAAAAGACTGGTTGTCTCTAGTTGCAGTTCATAGTGATGCGTGGCTC
CTGTCTGTTGCATTCTACTTTGGAGCTCGCTTTGGATTTGATAAAGATGCAAGGAGAAGG
CTCTTCACCATGATTAATAACCTGCCCACTGTTTATGAAGTTGTGACCGGGGTTGCTAAG
AAGCAATCAAAAGCCCCCAACGGCAGCAGCAAAAGCAGCAAATCTAACTCTAAACCATCA
AAACAGATCAATTCTAACAGTAAGCCTGTGAAGCCAGCCCACCCAAACGAAGAGGAGGAT
AGCGGCCGTGAGGACGCAGAGGAGGACCAGGCGTACCTGTGTGGGTCCTGTGGGGAAAGC
TATGCGAATGGGGAGTTCTGGATCTGCTGCGATATCTGCGAGAAGTGGTTCCATGGCAAG
TGTGTCCGCATCACCCCTGCAAAGGCAGAGCACATCAAGCAGTACAAGTGTCCCAGCTGC
AGCACCAAGCGGAGCCGGGAATGACAGGCGCCCTGGGGCAGGACTCGCTCCCACTTGACG
AAGCATTTAGAATCATTAGGAGCAGTGAAAGTGTGAAACTGTGTCATTAGAATCACTTCC
TCTGTTTAGTGGACCAGTGCGTGTGCTGGCTGTTGTATTTTTCTCGTCGTGTGTTGTACA
CTGGTAGTAATGGACATGGTAGCTAGTGGTGACGTGTTGTGTTAGCAAGCAGGCTGACTG
TTGTCATCGTAGAGTCGGATGAACTGCTGGAGTTTGGAAACACATGTTCAGTAATTCAGT
GATGTTTAGCGTGTATGATAATTTTCTTCGGCTT