Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d050616_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:4:104893737:104901453:-1 gene:Zm00001d050616 gene_biotype:protein_coding transcript_biotype:protein_coding description:26S protease regulatory subunit 6B%3B 26S proteasome regulatory complex ATPase RPT3 isoform 1%3B 26S proteasome regulatory complex ATPase RPT3 isoform 2
Sequence	ATGTCGGCCGCCACCACCGGCCCAGCCCCTTCAGTAGCCACTCCGATGGCGCCCCCTCCG TCCTACCCGGCCTCCTCCACGGCCTCTTCCTCCATCTCCGCGTCCGCCGAGGAGGAGGAG GACCTCTATGGCCGCCTCAAATCGCTCCAACGCCACATGGAGTTCGTCGAAATCCAGGAG GAGTACGTTAAAGACGAGCAGAAGAACCTGAAGCGCGAACTCCTTCGTGCGCAGGAGGAG GTTAAGCGGATCCAGTCTGTACCGCTCGTCATTGGCCAGTTTATGGAGATGGTCGACGGC AACAACGGCATCGTGGGCTCTACCACTGGCAGCAACTACTACGTGCGGATCCTCAGCACC ATCAACCGCGAGTTGCTCAAGCCGTCAGCGTCCGTCGCGTTGCATCGTCACTCCAACGCT CTAGTCGACGTGCTGCCGCCGGAGGCCGACTCCAGCATCTCCTTGTTGGGATCGTCGGAG AAGCCCAACGTCACTTACAACGATATTGGAGGATGTGACATCCAAAAGCAAGAAATACGG GAGGCGGTTGAATTACCCTTGACTCATCATGAGTTGTACAAGCAGATTGGTATTGATCCT CCAAGAGGGGTGCTTCTGTATGGTCCTCCGGGTACTGGCAAGACCATGCTTGCCAAAGCA GTTGCACATCATACCACTGCTGCTTTTATCAGGGTCGTCGGTTCAGAGTTTGTTCAAAAG TACTTGGGTGAGGGCCCTAGAATGGTGCGTGACGTGTTCCGTTTGGCCAAGGAGAATGCC CCAGCAATCATTTTCATTGATGAGGTTGATGCTATAGCCACTGCTCGTTTTGATGCTCAG ACTGGTGCTGACCGAGAAGTTCAGCGTATTCTTATGGAGCTACTCAATCAGATGGATGGG TTTGATCAAACAGTCAATGTGAAGGTTATAATGGCAACTAATCGGGCAGACACTCTAGAT CCTGCTTTGTTGCGTCCTGGTAGACTTGACAGGAAAATTGAGTTCCCTCTGCCAGACCGG CGTCAGAAGAGGCTTGTTTTTCAAGTTTGCACTGCCAAAATGAACCTGAGCGATGAGGTT GATTTGGAAGATTATGTTTCCAGACCGGATAAGATCAGTGCTGCTGATATTGCTGCTATC TGCCAAGAGGCTGGCATGCATGCTGTCCGCAAAAACCGATATGTCATCCTCCCCAAGGAC TTTGAAAAGGGCTACCGAACCAACGTGAAGAAGCCCGAGACAGACTTTGATTTCTACAAA TGA

Peptide Sequence

PEP ID	Zm00001d050616_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:4:104893737:104901453:-1 gene:Zm00001d050616 transcript:Zm00001d050616_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:26S protease regulatory subunit 6B%3B 26S proteasome regulatory complex ATPase RPT3 isoform 1%3B 26S proteasome regulatory complex ATPase RPT3 isoform 2
Sequence	MSAATTGPAPSVATPMAPPPSYPASSTASSSISASAEEEEDLYGRLKSLQRHMEFVEIQE EYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDGNNGIVGSTTGSNYYVRILST INRELLKPSASVALHRHSNALVDVLPPEADSSISLLGSSEKPNVTYNDIGGCDIQKQEIR EAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQK YLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDG FDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEV DLEDYVSRPDKISAADIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPETDFDFYK

Transcript Sequence

Transcript ID	Zm00001d050616_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:104893737:104901453:-1 gene:Zm00001d050616 gene_biotype:protein_coding transcript_biotype:protein_coding description:26S protease regulatory subunit 6B%3B 26S proteasome regulatory complex ATPase RPT3 isoform 1%3B 26S proteasome regulatory complex ATPase RPT3 isoform 2
Sequence	AAGCAAAGCTAAACAATACCCGTCTTGCCTTCAAATCGAACTCCTCCCCCGATCGATCCC AATCGAACCCACCAAGCCGATACCCTAACCCTCGCCCTTCTCGATGTCGGCCGCCACCAC CGGCCCAGCCCCTTCAGTAGCCACTCCGATGGCGCCCCCTCCGTCCTACCCGGCCTCCTC CACGGCCTCTTCCTCCATCTCCGCGTCCGCCGAGGAGGAGGAGGACCTCTATGGCCGCCT CAAATCGCTCCAACGCCACATGGAGTTCGTCGAAATCCAGGAGGAGTACGTTAAAGACGA GCAGAAGAACCTGAAGCGCGAACTCCTTCGTGCGCAGGAGGAGGTTAAGCGGATCCAGTC TGTACCGCTCGTCATTGGCCAGTTTATGGAGATGGTCGACGGCAACAACGGCATCGTGGG CTCTACCACTGGCAGCAACTACTACGTGCGGATCCTCAGCACCATCAACCGCGAGTTGCT CAAGCCGTCAGCGTCCGTCGCGTTGCATCGTCACTCCAACGCTCTAGTCGACGTGCTGCC GCCGGAGGCCGACTCCAGCATCTCCTTGTTGGGATCGTCGGAGAAGCCCAACGTCACTTA CAACGATATTGGAGGATGTGACATCCAAAAGCAAGAAATACGGGAGGCGGTTGAATTACC CTTGACTCATCATGAGTTGTACAAGCAGATTGGTATTGATCCTCCAAGAGGGGTGCTTCT GTATGGTCCTCCGGGTACTGGCAAGACCATGCTTGCCAAAGCAGTTGCACATCATACCAC TGCTGCTTTTATCAGGGTCGTCGGTTCAGAGTTTGTTCAAAAGTACTTGGGTGAGGGCCC TAGAATGGTGCGTGACGTGTTCCGTTTGGCCAAGGAGAATGCCCCAGCAATCATTTTCAT TGATGAGGTTGATGCTATAGCCACTGCTCGTTTTGATGCTCAGACTGGTGCTGACCGAGA AGTTCAGCGTATTCTTATGGAGCTACTCAATCAGATGGATGGGTTTGATCAAACAGTCAA TGTGAAGGTTATAATGGCAACTAATCGGGCAGACACTCTAGATCCTGCTTTGTTGCGTCC TGGTAGACTTGACAGGAAAATTGAGTTCCCTCTGCCAGACCGGCGTCAGAAGAGGCTTGT TTTTCAAGTTTGCACTGCCAAAATGAACCTGAGCGATGAGGTTGATTTGGAAGATTATGT TTCCAGACCGGATAAGATCAGTGCTGCTGATATTGCTGCTATCTGCCAAGAGGCTGGCAT GCATGCTGTCCGCAAAAACCGATATGTCATCCTCCCCAAGGACTTTGAAAAGGGCTACCG AACCAACGTGAAGAAGCCCGAGACAGACTTTGATTTCTACAAATGAGTCAACCCAGAGTG TTGAACTCGTTTCTTGTTTATCAATTGATTATCTTTTACCATCAGCTGAGTTTATGGATA GTTGCCATTACAAATATTCAAGTTCCTCAATGATGATGTGTGTTCTGTAATGATTTTTTG GATTGTTTGCCTGTCGTTCATGGTGATCTGCTT