Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d050614_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:104549299:104563850:-1 gene:Zm00001d050614 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 33
Sequence	ATGATGGCAGCGCCATCGGGTGGTGGATGCAGTGGCTGTCTTGACTGCCTGCATGATATT GTGCATGCACTATCGATGGGATCATGCCTGACAGTAGAGCAGCGGCCTGCCATGGCTACG GGAGGTGCGCACAAAGGGAGAGATGTAAAAGAGAGGAAGGAAAAGGTGGAGGGTAGGATA ATAGGAAATGGAGTGGGTAATTTGGCTTGCATGTTCACGCGACAGGGGAAGAAGGGTACC AACCAGGATGCCATGGTTGTTTGGGAGAATTTTAATGGAAGGTCAGACACGATTTTTTGT GGAGTTTTTGATGGCCACGGTCCGCATGGCCATATTGTAGCAAGGAAAGTTAGAGATACT CTCCCTTCGAAGCTGCGTGCTCTGATATATGATGACTTTGGGGAGAGCCCCATTTGCAAT TCAGATGGCTCAATTCTAGAAGAAACTTTATCTCCGTACGCTGATGAAGAAGACAAGTCT CCAGTGTCTGTAGAAAAAGGAGAACGTCAGGAATCCTTTTTGTCAATGAAAGATTCATTC CGGAAGGCTTTTAGGGTAACAGACAAAGAACTTAAATTGAACCGGAATATCGATAGCATT TGCAGCGGAAGTACAGCAGTTACTTTAATCAAGCAGGGCCAGGATCTTATTGTTGCGAAT TTAGGTGACTCTAGGGCTGTATTAGGAACCAGAGATCAAAACGGCCGTTTGGTAGCTCAT CAGTTGACAGTTGATTTGAAACCCGATCATCCAAGAGAGGCAAGGAGAATCAGGCGATGT AACGGAAGGGTTTTTGCTCATCAGGATGAACCAGACGTATCTCGCTTGTGGCTTCCAAAT TGTAACTCCCCCGGTCTAGCAATGGCACGAGCTTTTGGCGATTTCTGTCTCAAGGATTTT GGGTTAATCTGTGTGCCTGAAGTCACCTATAGACAAATCAGTAAGAAGGATGAATTCATT ATCCTTGCTACAGATGGGGTGTGGGATGTCTTGACCAATCAGGAAGTCATGGACGTAGTT GCTTCATGCTCTGAGCGTTCGTCTGCAGCTCGTTCTATCGTTGATCTAGCAAATCAGGCA TGGAGGTTTAAATACCCAACTTCCAAAACTGATGACTGTGCAACGATATGTCTTTTTCTC GACGTAGAGGACAAGGCTGCTGGCTTGTCAGTGTCGTCATCTGTTGCTAGCAAGGGAACT GGATCACAAGCTCAGCCAAGGAAGCCCAGGCTCCATACTAGTGTACCACCTGAAGATGTA GATGATGGGAGTGAATCAAATATCAGTGGAGATGAAAGGTCCTTGGACAGCTTCACTAGG TTGAACACACTACTGGCACTACCAAAGCTCGGAGACACAAGTCTGAAAATAAAATGA

Peptide Sequence

PEP ID	Zm00001d050614_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:104549299:104563850:-1 gene:Zm00001d050614 transcript:Zm00001d050614_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 33
Sequence	MMAAPSGGGCSGCLDCLHDIVHALSMGSCLTVEQRPAMATGGAHKGRDVKERKEKVEGRI IGNGVGNLACMFTRQGKKGTNQDAMVVWENFNGRSDTIFCGVFDGHGPHGHIVARKVRDT LPSKLRALIYDDFGESPICNSDGSILEETLSPYADEEDKSPVSVEKGERQESFLSMKDSF RKAFRVTDKELKLNRNIDSICSGSTAVTLIKQGQDLIVANLGDSRAVLGTRDQNGRLVAH QLTVDLKPDHPREARRIRRCNGRVFAHQDEPDVSRLWLPNCNSPGLAMARAFGDFCLKDF GLICVPEVTYRQISKKDEFIILATDGVWDVLTNQEVMDVVASCSERSSAARSIVDLANQA WRFKYPTSKTDDCATICLFLDVEDKAAGLSVSSSVASKGTGSQAQPRKPRLHTSVPPEDV DDGSESNISGDERSLDSFTRLNTLLALPKLGDTSLKIK

Transcript Sequence

Transcript ID	Zm00001d050614_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:104549299:104563850:-1 gene:Zm00001d050614 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 33
Sequence	GCTCCCAAATATGATGTCTTCTATCGTCTATACGCTTGTTTCTCCTCCATATTGTCGTAT GAATTATGCGATCACGAAAGGGAGGGGATACTGGGTAGCAATTGGTGTGGAGAGGAAAGG TTCAAGTTGATTTTAACCAAGGCAGCACGACGGCAGCGACGACGACATACAACAACACGA CGGTAGGGGTGATGATGGCAGCGCCATCGGGTGGTGGATGCAGTGGCTGTCTTGACTGCC TGCATGATATTGTGCATGCACTATCGATGGGATCATGCCTGACAGTAGAGCAGCGGCCTG CCATGGCTACGGGAGGTGCGCACAAAGGGAGAGATGTAAAAGAGAGGAAGGAAAAGGTGG AGGGTAGGATAATAGGAAATGGAGTGGGTAATTTGGCTTGCATGTTCACGCGACAGGGGA AGAAGGGTACCAACCAGGATGCCATGGTTGTTTGGGAGAATTTTAATGGAAGGTCAGACA CGATTTTTTGTGGAGTTTTTGATGGCCACGGTCCGCATGGCCATATTGTAGCAAGGAAAG TTAGAGATACTCTCCCTTCGAAGCTGCGTGCTCTGATATATGATGACTTTGGGGAGAGCC CCATTTGCAATTCAGATGGCTCAATTCTAGAAGAAACTTTATCTCCGTACGCTGATGAAG AAGACAAGTCTCCAGTGTCTGTAGAAAAAGGAGAACGTCAGGAATCCTTTTTGTCAATGA AAGATTCATTCCGGAAGGCTTTTAGGGTAACAGACAAAGAACTTAAATTGAACCGGAATA TCGATAGCATTTGCAGCGGAAGTACAGCAGTTACTTTAATCAAGCAGGGCCAGGATCTTA TTGTTGCGAATTTAGGTGACTCTAGGGCTGTATTAGGAACCAGAGATCAAAACGGCCGTT TGGTAGCTCATCAGTTGACAGTTGATTTGAAACCCGATCATCCAAGAGAGGCAAGGAGAA TCAGGCGATGTAACGGAAGGGTTTTTGCTCATCAGGATGAACCAGACGTATCTCGCTTGT GGCTTCCAAATTGTAACTCCCCCGGTCTAGCAATGGCACGAGCTTTTGGCGATTTCTGTC TCAAGGATTTTGGGTTAATCTGTGTGCCTGAAGTCACCTATAGACAAATCAGTAAGAAGG ATGAATTCATTATCCTTGCTACAGATGGGGTGTGGGATGTCTTGACCAATCAGGAAGTCA TGGACGTAGTTGCTTCATGCTCTGAGCGTTCGTCTGCAGCTCGTTCTATCGTTGATCTAG CAAATCAGGCATGGAGGTTTAAATACCCAACTTCCAAAACTGATGACTGTGCAACGATAT GTCTTTTTCTCGACGTAGAGGACAAGGCTGCTGGCTTGTCAGTGTCGTCATCTGTTGCTA GCAAGGGAACTGGATCACAAGCTCAGCCAAGGAAGCCCAGGCTCCATACTAGTGTACCAC CTGAAGATGTAGATGATGGGAGTGAATCAAATATCAGTGGAGATGAAAGGTCCTTGGACA GCTTCACTAGGTTGAACACACTACTGGCACTACCAAAGCTCGGAGACACAAGTCTGAAAA TAAAATGAAGCTTATTGCCTTCGCATGCAGTTAGCAGCATCAGTGGACGAAAACATTGTT GGTTTTATTAGAACACTTAATTTGTGATGTCTCGACATAATTGCCGGTCACTTAAAGGAG GAGTGGGCTGCTGCATTTCTATGCAAACTCATATGTGAGCAAATGCTACTCTCCTAGTGA CATCTTTAATCATTATGGTCTCAGAAATATTGGACGTATGCTATGAAAGCATTTTTCTTT TGAAGATATACAAAATCTTCATTTGATCAGCCGTATGTAGATGTGGGTTGCCACATTTCC ACATTATGTGGTCACCTATAATCATTT