Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d050606_T035
CDS Infomation

cds chromosome:B73_RefGen_v4:4:103707578:103714536:-1 gene:Zm00001d050606 gene_biotype:protein_coding transcript_biotype:protein_coding description:TUDOR-SN protein 1
Sequence

ATGGCATCCAACACAGGAGCATCAGGATGGCTCAGGGGTAAGGTGAAGGCTGTGACATCT
GGAGATTGTCTACTAATCATGGGGAGCTCAAAAGCTGAGATCCCACCTGAGAAGTCCATC
ACCCTGTCCTACCTTATGGCCCCAAGGCTGGCTCGCCGTGGTGGAGTTGACGAGCCCTTT
GCATGGGAAAGCAGAGAGTTTCTAAGGAAGCTTTGTATAGGGAAGGAGGTCACATTCAGA
GTGGATTATACGGCTCCTAATATTGGACGAGAATTCGGAACTGTTTATCTAGGTGACAAG
AATGTTGCGTACTCAGTAATTTCTGCTGGATGGGCAAGGGTAAAGGAGCAAGGCCCAAAG
GGGGGCGAACAAAATTCGTACCTTGCCGAGCTGTTGAGGTTGGAGGAAGTTGCCAAACAA
CAGGGTGTTGGTCGTTGGAGCAAGGAACCTGGTGCTGCTGAAGAGTCAATAAGAGATCTT
CCACCATCCGCAATTGGTGAAGGAAGTGGTTTTGATGCAAAGGGTTTTGCGGTTTCCAAT
AAAGGCAAGAGTTTGGAGGCCATTGTTGAACAAGTTCGTGATGGCAGTACTGTTCGTGTG
TATTTACTCCCTAATTTCCAGTTTGTGCAGATATATGTTGCTGGAGTACAGGCTCCATCA
ATGGGAAGACGTCCATCGGTACCTACTGTAATTGCTGAAACTGATGATAATGCTAATATC
GCGAACGCTGAAGATCCTGAGGGAACACCTGCGCAACTGACTACAGCACAAAGGCTAGTT
GCATCTGCAGCTTCTGCTGAAATTCCACCAGATAGGTATGGAAGAGAAGCCAAACATTTC
ACAGAGACTAGAGTTCTCAACAGAGATGTGCGTATTGTGGTGGAAGGCACAGACAGCTTT
AGTAATATAATTGGTTCTGTGTATTACCCTGATGGAGAGACTGCAAAGGACTTGGCCCTT
GAGCTTGTCGAAAATGGGCTGGCAAAGTATGTTGAGTGGAGTGCCAATATGCTTGATGTT
GAAGTAAAAATAAAGCTGAAGAATGCAGAACTTCAGGCTAAAAAGGATCAATTGAGAATC
TGGACAGGGTTTAAGCCACCAGCGACAAACTCGAAGCCCATTCATGACCAGAAATTTAAT
GGAAAAGTGGTAGAGGTTGTAAGTGGGGATTGCATTATTGTGGCTGATGATTCTGCTCCA
TATGGAAGTCCTTCAGCTGAACGTCGGGTTAATCTGTCAAGCATTAGGGCTCCTAAGTTG
GGCAATGCTCGTACAGATGTGAAGCCTGACCATTTTGCTCGTGAAGCTAAGGAGTTCTTA
CGCACGAGGTTGATTGGCAAACAAGTGGCTGTTGAAATGGAATACTCTCGAAGGATCAGC
ACTGTAGATGGACAGAGTGCTGCTCCAACAGCAAACATGGCTGATACAAGAGTTTTAGAT
TATGGGTCAGTTTTTCTGGGTTCACCATCACAGACTGATGGAGATGACACATCTTCTGCT
CCGAGCTCTGCTAGCCAGCCTGGAGTTAATGTTGCTGAGCTTTTGCTCTCACGAGGCTTT
GCTAAAACATCTAAACACAGGGATTATGAGGAAAGGTCACACTATTATGATGCTTTATTA
GCAGCTGAATCACGCGCTGAGAAAGCAAAGAAAGGCGTGCATTCTCAGAAAGAATCTCCT
GTGATGCATATAACAGATTTAACAACTGTATCTGCAAAGAAGGCCAAAGATTTTCTTCCC
TTCTTGCAGCGGAACAGAAGGCATTCGGCCATCGTTGAATATGTTTTTAGTGGCCATCGG
TTCAAACTAACAATTCCCAAGGAGACTTGTAGTATCGCCTTCTCATTATCTGGTGTCCGT
TGTCCTGGTAAAGGCGAGCCATACTCAGACGAAGCTATTGCTTTGATGAGGAGAAGGATA
CTTCAACGAGATGTGGAGATAGAGGTTGAAGCAGTTGATAGGACAGGAACGTTCATAGGT
TCTTTGTGGGAGTCCAAGACCAACATGGGCTCTGTGCTTCTGGAAGCTGGACTTGCCAAG
CTGAGTTCATTTGGCTTGGATAGGACCTCAGATGCTTATATCCTAACAAGAGCTGAACAG
TCTGCGAAGCAACAGAAGATTAAGATATGGGAGAACTATGTCGAGGGTGAAAATGCTTCC
AATGGATCCACACCTGAATCTAAACAAAAGCAAATTCTCAAGGTTGTTGTCACGGAAGTT
CTTGGTGGTGGGAAGTTTTATGTTCAGACAATGGGTGACCAGAGGGTGGCTTCAATTCAA
CAGCAGCTTGCATCTTTGAAACTTAAAGATGCGCCGGTCATTGGTGCTTTTAATCCTGTG
AAGGGAGAGATAGTCCTCGCACAATTTAGCGTTGACAACTCCTGGAACAGAGCTATGATT
GTTAATGGACCTCGTTCTGTTGAATCTCCGGACGACAAGTTTGAAGTATTCTATATTGAC
TATGGCAACCAAGAGGTGGTTACCTACAGTCGTTTACGACCTGTAGACCCATCTGTTTCC
TCGTCTCCTGCTCTTGCTCAGCTATGCAGCCTTGCTTTCATAAAAGTGCCCAGTCTTGAG
GATGACTTTGGTCAGGAAGCAGCAGAGTATCTAAGTGAATGTTTGCTCAGTAGCTCAAAG
CAATACCGGGCAATGATCGAAGAACATGATACTTCTGGGGGGAAATCAAAAGGACAAGGA
ACCGGAAATGTTCTCATTGTTACTCTTGTTGATGCGGAGACAGAAAGTAGCATAAACGCT
ACCATGCTTGAGGAAGGGCTTGCCCGGCTCGAAAGAAGCAAGAGATGGGACACTAGGGAG
AGGAAGACGGCTCTCCAGAACCTGGAACAGTTCCAGGACAAGGCAAAGAAGGAAAGGCTG
CGGATTTGGCAGTACGGAGATGTTGAATCGGACGAGGACGAGCAGGCCCCGCCTGCAAGG
AAGCCTGGAGGTCGTCGGTAG

Peptide Sequence

PEP ID

Zm00001d050606_P035
PEP Infomation

pep chromosome:B73_RefGen_v4:4:103707578:103714536:-1 gene:Zm00001d050606 transcript:Zm00001d050606_T035 gene_biotype:protein_coding transcript_biotype:protein_coding description:TUDOR-SN protein 1
Sequence

MASNTGASGWLRGKVKAVTSGDCLLIMGSSKAEIPPEKSITLSYLMAPRLARRGGVDEPF
AWESREFLRKLCIGKEVTFRVDYTAPNIGREFGTVYLGDKNVAYSVISAGWARVKEQGPK
GGEQNSYLAELLRLEEVAKQQGVGRWSKEPGAAEESIRDLPPSAIGEGSGFDAKGFAVSN
KGKSLEAIVEQVRDGSTVRVYLLPNFQFVQIYVAGVQAPSMGRRPSVPTVIAETDDNANI
ANAEDPEGTPAQLTTAQRLVASAASAEIPPDRYGREAKHFTETRVLNRDVRIVVEGTDSF
SNIIGSVYYPDGETAKDLALELVENGLAKYVEWSANMLDVEVKIKLKNAELQAKKDQLRI
WTGFKPPATNSKPIHDQKFNGKVVEVVSGDCIIVADDSAPYGSPSAERRVNLSSIRAPKL
GNARTDVKPDHFAREAKEFLRTRLIGKQVAVEMEYSRRISTVDGQSAAPTANMADTRVLD
YGSVFLGSPSQTDGDDTSSAPSSASQPGVNVAELLLSRGFAKTSKHRDYEERSHYYDALL
AAESRAEKAKKGVHSQKESPVMHITDLTTVSAKKAKDFLPFLQRNRRHSAIVEYVFSGHR
FKLTIPKETCSIAFSLSGVRCPGKGEPYSDEAIALMRRRILQRDVEIEVEAVDRTGTFIG
SLWESKTNMGSVLLEAGLAKLSSFGLDRTSDAYILTRAEQSAKQQKIKIWENYVEGENAS
NGSTPESKQKQILKVVVTEVLGGGKFYVQTMGDQRVASIQQQLASLKLKDAPVIGAFNPV
KGEIVLAQFSVDNSWNRAMIVNGPRSVESPDDKFEVFYIDYGNQEVVTYSRLRPVDPSVS
SSPALAQLCSLAFIKVPSLEDDFGQEAAEYLSECLLSSSKQYRAMIEEHDTSGGKSKGQG
TGNVLIVTLVDAETESSINATMLEEGLARLERSKRWDTRERKTALQNLEQFQDKAKKERL
RIWQYGDVESDEDEQAPPARKPGGRR

Transcript Sequence

Transcript ID

Zm00001d050606_T035
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:103707578:103714536:-1 gene:Zm00001d050606 gene_biotype:protein_coding transcript_biotype:protein_coding description:TUDOR-SN protein 1
Sequence

GCATCCCCTCGCCCGTCGTCTCGCCAGTCGCTACACCCCAAAAACCTCACGCGCGCGCTC
GCGACCCCTCGCGCTCGCCTCGTCGGCACGCCGGCGAGAGGGGCGCCCATCCCCGTGCCT
ATATAAGGACGCCGGATTGGAGGTGCCCGTCCCTTATCCGCGCGGCCAGATCTACCTCTG
TTCCACGCCTCCGTCACCGCCGCGTCGGGGCGATCCCACCGAGGCCACAGGTATAAGCTG
GTACCATGGCATCCAACACAGGAGCATCAGGATGGCTCAGGGGTAAGGTGAAGGCTGTGA
CATCTGGAGATTGTCTACTAATCATGGGGAGCTCAAAAGCTGAGATCCCACCTGAGAAGT
CCATCACCCTGTCCTACCTTATGGCCCCAAGGCTGGCTCGCCGTGGTGGAGTTGACGAGC
CCTTTGCATGGGAAAGCAGAGAGTTTCTAAGGAAGCTTTGTATAGGGAAGGAGGTCACAT
TCAGAGTGGATTATACGGCTCCTAATATTGGACGAGAATTCGGAACTGTTTATCTAGGTG
ACAAGAATGTTGCGTACTCAGTAATTTCTGCTGGATGGGCAAGGGTAAAGGAGCAAGGCC
CAAAGGGGGGCGAACAAAATTCGTACCTTGCCGAGCTGTTGAGGTTGGAGGAAGTTGCCA
AACAACAGGGTGTTGGTCGTTGGAGCAAGGAACCTGGTGCTGCTGAAGAGTCAATAAGAG
ATCTTCCACCATCCGCAATTGGTGAAGGAAGTGGTTTTGATGCAAAGGGTTTTGCGGTTT
CCAATAAAGGCAAGAGTTTGGAGGCCATTGTTGAACAAGTTCGTGATGGCAGTACTGTTC
GTGTGTATTTACTCCCTAATTTCCAGTTTGTGCAGATATATGTTGCTGGAGTACAGGCTC
CATCAATGGGAAGACGTCCATCGGTACCTACTGTAATTGCTGAAACTGATGATAATGCTA
ATATCGCGAACGCTGAAGATCCTGAGGGAACACCTGCGCAACTGACTACAGCACAAAGGC
TAGTTGCATCTGCAGCTTCTGCTGAAATTCCACCAGATAGGTATGGAAGAGAAGCCAAAC
ATTTCACAGAGACTAGAGTTCTCAACAGAGATGTGCGTATTGTGGTGGAAGGCACAGACA
GCTTTAGTAATATAATTGGTTCTGTGTATTACCCTGATGGAGAGACTGCAAAGGACTTGG
CCCTTGAGCTTGTCGAAAATGGGCTGGCAAAGTATGTTGAGTGGAGTGCCAATATGCTTG
ATGTTGAAGTAAAAATAAAGCTGAAGAATGCAGAACTTCAGGCTAAAAAGGATCAATTGA
GAATCTGGACAGGGTTTAAGCCACCAGCGACAAACTCGAAGCCCATTCATGACCAGAAAT
TTAATGGAAAAGTGGTAGAGGTTGTAAGTGGGGATTGCATTATTGTGGCTGATGATTCTG
CTCCATATGGAAGTCCTTCAGCTGAACGTCGGGTTAATCTGTCAAGCATTAGGGCTCCTA
AGTTGGGCAATGCTCGTACAGATGTGAAGCCTGACCATTTTGCTCGTGAAGCTAAGGAGT
TCTTACGCACGAGGTTGATTGGCAAACAAGTGGCTGTTGAAATGGAATACTCTCGAAGGA
TCAGCACTGTAGATGGACAGAGTGCTGCTCCAACAGCAAACATGGCTGATACAAGAGTTT
TAGATTATGGGTCAGTTTTTCTGGGTTCACCATCACAGACTGATGGAGATGACACATCTT
CTGCTCCGAGCTCTGCTAGCCAGCCTGGAGTTAATGTTGCTGAGCTTTTGCTCTCACGAG
GCTTTGCTAAAACATCTAAACACAGGGATTATGAGGAAAGGTCACACTATTATGATGCTT
TATTAGCAGCTGAATCACGCGCTGAGAAAGCAAAGAAAGGCGTGCATTCTCAGAAAGAAT
CTCCTGTGATGCATATAACAGATTTAACAACTGTATCTGCAAAGAAGGCCAAAGATTTTC
TTCCCTTCTTGCAGCGGAACAGAAGGCATTCGGCCATCGTTGAATATGTTTTTAGTGGCC
ATCGGTTCAAACTAACAATTCCCAAGGAGACTTGTAGTATCGCCTTCTCATTATCTGGTG
TCCGTTGTCCTGGTAAAGGCGAGCCATACTCAGACGAAGCTATTGCTTTGATGAGGAGAA
GGATACTTCAACGAGATGTGGAGATAGAGGTTGAAGCAGTTGATAGGACAGGAACGTTCA
TAGGTTCTTTGTGGGAGTCCAAGACCAACATGGGCTCTGTGCTTCTGGAAGCTGGACTTG
CCAAGCTGAGTTCATTTGGCTTGGATAGGACCTCAGATGCTTATATCCTAACAAGAGCTG
AACAGTCTGCGAAGCAACAGAAGATTAAGATATGGGAGAACTATGTCGAGGGTGAAAATG
CTTCCAATGGATCCACACCTGAATCTAAACAAAAGCAAATTCTCAAGGTTGTTGTCACGG
AAGTTCTTGGTGGTGGGAAGTTTTATGTTCAGACAATGGGTGACCAGAGGGTGGCTTCAA
TTCAACAGCAGCTTGCATCTTTGAAACTTAAAGATGCGCCGGTCATTGGTGCTTTTAATC
CTGTGAAGGGAGAGATAGTCCTCGCACAATTTAGCGTTGACAACTCCTGGAACAGAGCTA
TGATTGTTAATGGACCTCGTTCTGTTGAATCTCCGGACGACAAGTTTGAAGTATTCTATA
TTGACTATGGCAACCAAGAGGTGGTTACCTACAGTCGTTTACGACCTGTAGACCCATCTG
TTTCCTCGTCTCCTGCTCTTGCTCAGCTATGCAGCCTTGCTTTCATAAAAGTGCCCAGTC
TTGAGGATGACTTTGGTCAGGAAGCAGCAGAGTATCTAAGTGAATGTTTGCTCAGTAGCT
CAAAGCAATACCGGGCAATGATCGAAGAACATGATACTTCTGGGGGGAAATCAAAAGGAC
AAGGAACCGGAAATGTTCTCATTGTTACTCTTGTTGATGCGGAGACAGAAAGTAGCATAA
ACGCTACCATGCTTGAGGAAGGGCTTGCCCGGCTCGAAAGAAGCAAGAGATGGGACACTA
GGGAGAGGAAGACGGCTCTCCAGAACCTGGAACAGTTCCAGGACAAGGCAAAGAAGGAAA
GGCTGCGGATTTGGCAGTACGGAGATGTTGAATCGGACGAGGACGAGCAGGCCCCGCCTG
CAAGGAAGCCTGGAGGTCGTCGGTAGAG