Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d050412_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:4:86684719:86687129:-1 gene:Zm00001d050412 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chorismate mutase 2
Sequence	ATGGCCGTGCGCGCCATCGATACGCCGCTCCTCCTGTGCACCATGGTGGTGGTGCTGACC GGCCTCGTGTCCCCGTCCACCGCCGGGCTCAGCCTGGACACGGTGAGGGACTTCCTGACG CGGGAGGAGGACACCATTGTGTTCAGCCTCATCGAGAGGGCCAAGTACCCGCTCAACCGG CCGGCCTACGACCCCCTCCACTCCGCCGCCGGCCGCCGCCTCAACGCCTCTTTCGTCGAG CTCTTCATCCGCGAGTCCGAGGCCGTTCAGTCCAAGGCCGGAAGGTACCAAAGCCTACAG GAGATTCCATTCTTCGCTTACAGAGTTCCTTCCGCTCTGGCGCCTCCATACAACTTCACA AGCGATCTGTATCCCGCTGCCGCGTCAGTCAACGTTAACGACGCCATATGGAGCATGTAC TTCGACGAGCTGCTCCCTCGGCTGGCTAAGAATGGCGATGATGGCAACTACGCCGTAGCT GCTGATGCAGATCTTGCGTGTCTTCAGGTACGCAAACAATCTCCCGAATCCATCACAAAT GTGCTTTCAAGGAGGATCAACTACGGCAGGTACGTAGCTGAAGTGAAGTTCAGAGGAGAC CAGCAGACCTATACCAGCTTAATCCAGGCGAAGGACAGAGACGCTCTGGTGAAGCTACTG ACGTCTGAAGCCCAAGAGGACGTGGTGAAGAGAAGGGTAGAGAAGAAGGCGGCCGTGTTC GGGCAAAGCGTAACGTTGGACGGACCAGTCCAAACGGATGCCAACAGCCAGGCTAACTCT AGCTTATTCAAAGTCGACCCTTCGGTCGTTTACGAGCTGTATGGCCAGCGGGTGATTCCG TTGACGAAACAGGTGGAGGTCGAGTACCTTCTCCATCGCCTCGACTGA

Peptide Sequence

PEP ID	Zm00001d050412_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:4:86684719:86687129:-1 gene:Zm00001d050412 transcript:Zm00001d050412_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chorismate mutase 2
Sequence	MAVRAIDTPLLLCTMVVVLTGLVSPSTAGLSLDTVRDFLTREEDTIVFSLIERAKYPLNR PAYDPLHSAAGRRLNASFVELFIRESEAVQSKAGRYQSLQEIPFFAYRVPSALAPPYNFT SDLYPAAASVNVNDAIWSMYFDELLPRLAKNGDDGNYAVAADADLACLQVRKQSPESITN VLSRRINYGRYVAEVKFRGDQQTYTSLIQAKDRDALVKLLTSEAQEDVVKRRVEKKAAVF GQSVTLDGPVQTDANSQANSSLFKVDPSVVYELYGQRVIPLTKQVEVEYLLHRLD

Transcript Sequence

Transcript ID	Zm00001d050412_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:86684719:86687129:-1 gene:Zm00001d050412 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chorismate mutase 2
Sequence	GCGCTGACTCGGCAAATCATCGCCTCATCTTCCTCTTCTCGCACCTGCGAAGTCCCCCCG CTTTCTATCCCCCCGCCTGGCCGCCTCTAAGACAACAGAGACAGCAATGGCCGTGCGCGC CATCGATACGCCGCTCCTCCTGTGCACCATGGTGGTGGTGCTGACCGGCCTCGTGTCCCC GTCCACCGCCGGGCTCAGCCTGGACACGGTGAGGGACTTCCTGACGCGGGAGGAGGACAC CATTGTGTTCAGCCTCATCGAGAGGGCCAAGTACCCGCTCAACCGGCCGGCCTACGACCC CCTCCACTCCGCCGCCGGCCGCCGCCTCAACGCCTCTTTCGTCGAGCTCTTCATCCGCGA GTCCGAGGCCGTTCAGTCCAAGGCCGGAAGGTACCAAAGCCTACAGGAGATTCCATTCTT CGCTTACAGAGTTCCTTCCGCTCTGGCGCCTCCATACAACTTCACAAGCGATCTGTATCC CGCTGCCGCGTCAGTCAACGTTAACGACGCCATATGGAGCATGTACTTCGACGAGCTGCT CCCTCGGCTGGCTAAGAATGGCGATGATGGCAACTACGCCGTAGCTGCTGATGCAGATCT TGCGTGTCTTCAGGTACGCAAACAATCTCCCGAATCCATCACAAATGTGCTTTCAAGGAG GATCAACTACGGCAGGTACGTAGCTGAAGTGAAGTTCAGAGGAGACCAGCAGACCTATAC CAGCTTAATCCAGGCGAAGGACAGAGACGCTCTGGTGAAGCTACTGACGTCTGAAGCCCA AGAGGACGTGGTGAAGAGAAGGGTAGAGAAGAAGGCGGCCGTGTTCGGGCAAAGCGTAAC GTTGGACGGACCAGTCCAAACGGATGCCAACAGCCAGGCTAACTCTAGCTTATTCAAAGT CGACCCTTCGGTCGTTTACGAGCTGTATGGCCAGCGGGTGATTCCGTTGACGAAACAGGT GGAGGTCGAGTACCTTCTCCATCGCCTCGACTGAGACTGATCACTGATCGATCGCGTCAA ATGTGTATATATCCGGCTGACGGATTTGTATACCCGTAACGTATTTACATACATACATAC GCAATAAGAAATATACAGGACTGTTGTCCTCAGTTTTAT