Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d050406_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:4:86375052:86394527:-1 gene:Zm00001d050406 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable mannan synthase 7
Sequence	ATGGGCGTCTCCGAGGAGGCGGCGCGGGTGTGGGCGGAGCTGCCCGTGCGGGTGGACTGG GCGGCCGCGGCGGCGCAATGCGCGTCCCTGTGGGCGCACGCGCGCGCGCTGCTGGTCGCG CCAGCGGTGCGGGTCCTGGTGCTCCTGTCGCTGGCGATGACCGTGATGATACTGGCGGAG AAGCTGTTCGTCTGCGCCGTGTGCCTCGCCGTGCGGGCGCTCCGGCTCGGCCCGGACCGG CGCTACCGCTGGGAGCCCATCGGCGGCGGAGTCGGAGACGAGGAGGAGGAGTCCGGGTCC GGCCACGGCGCCAAGTACCCCATGGTGCTCGTGCAGATCCCTATGTACAACGAGCGGGAG GTGTACAAGCTGTCGATCGGGGCGGCATGCGAGCTGGAGTGGCCGTCGGAGCGCTTCATG ATCCAGGTGCTGGACGACTCCACGGACCCCGTTGTAAAGGATTTGGTGGAGACGGAATGC CAAAGATGGAAGAGCAAAGGCGTGAATATAAAGTACGAGGTGAGGGGGAACCGGAAGGGG TACAAGGCCGGCGCGCTCAAGGAAGGACTGAAGCATGACTACGTCGAAGACTGCGAGTAC ATCGCCATGTTCGATGCTGACTTCCAGCCCGAGCCTGATTTCCTCCTAAGGGCTGTCCCA TTCCTTGTGCATAACCCGGAGATCGCCCTCGTCCAAGCTCGCTGGAAATTCGTTAATTCT GGTGAGTGTCTGCTGACGAGATTCCAAGAAATGTCCTTGGACTACCATTTCAAGTATGAG CAAGAGGCAGGCTCCTCACTGCATTCATTCTTTGGCTTCAATGGGACAGCCGGTGTCTGG AGGATTGCAGCTATCGATGACGCCGGGGGCTGGAAGGACCGGACGACGGTGGAGGATATG GACCTGGCTGTCCGTGCGATGCTGCAGGGCTGGAAGTTTGTTTACGTCGGCGACATAAAA GTCAAGAGTGAATTGCCTAGCACGTTCAAGGCATACCGGTTTCAGCAGCACAGGTGGTCT TGTGGACCGGCAAACCTGTTCAAGAAAATGATGGTAGAGATTTTAGAAAACAAGAAAGTG TCATTGTGGAGCAAAATCTACTTATGGTACAATTTCTTCTTCGTTGGGAAGGTCGCTGCC CACACGGTGACATTCATCTACTACTGCTGTGCGATCCCCGTGTCTGTTTTGCTTCCTGAG ATTCAGATACCTCTCTGGGGAGTTGTCTATATCCCGACGCTCATAACCCTCTTGAAGGCT CTTGGCACACCAAGTTCGTTTCACCTGGTGATCCTCTGGGTTCTGTTTGAGAATGTCATG TCACTGCACCGGATTAAAGCTGCAGCAAGTGGTCTTCTGGATGCTGGTGGACGAGTCAAT GAGTGGGTTGTCACCGAGAAGTTGGGCGACACCAGCAAGGCAAAGCCTGGCGCCAATGGA TCAGATGATGTAAAGGTGATAGATGTAAAGCTAACAGAACCCCTCGTTCCCAAGCTAGTG AAGAGGCGAGCAAGATTTTGGGAGAGGTACAACTGCTCAGAACTTTTCGTTGGAACCTGC ATACTTCTGTGTGGTTTCTATGACTTGCTTTTTGCAAAGAAGGGATACTACATTTTTCTC TTCCTTCAAGGCACGGCTTTCCTTGTTGTTGGCTTTGGGTATGTCGGCACACTACCTCAT TGCAATGCATAA

Peptide Sequence

PEP ID	Zm00001d050406_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:4:86375052:86394527:-1 gene:Zm00001d050406 transcript:Zm00001d050406_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable mannan synthase 7
Sequence	MGVSEEAARVWAELPVRVDWAAAAAQCASLWAHARALLVAPAVRVLVLLSLAMTVMILAE KLFVCAVCLAVRALRLGPDRRYRWEPIGGGVGDEEEESGSGHGAKYPMVLVQIPMYNERE VYKLSIGAACELEWPSERFMIQVLDDSTDPVVKDLVETECQRWKSKGVNIKYEVRGNRKG YKAGALKEGLKHDYVEDCEYIAMFDADFQPEPDFLLRAVPFLVHNPEIALVQARWKFVNS GECLLTRFQEMSLDYHFKYEQEAGSSLHSFFGFNGTAGVWRIAAIDDAGGWKDRTTVEDM DLAVRAMLQGWKFVYVGDIKVKSELPSTFKAYRFQQHRWSCGPANLFKKMMVEILENKKV SLWSKIYLWYNFFFVGKVAAHTVTFIYYCCAIPVSVLLPEIQIPLWGVVYIPTLITLLKA LGTPSSFHLVILWVLFENVMSLHRIKAAASGLLDAGGRVNEWVVTEKLGDTSKAKPGANG SDDVKVIDVKLTEPLVPKLVKRRARFWERYNCSELFVGTCILLCGFYDLLFAKKGYYIFL FLQGTAFLVVGFGYVGTLPHCNA

Transcript Sequence

Transcript ID	Zm00001d050406_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:86375052:86394527:-1 gene:Zm00001d050406 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable mannan synthase 7
Sequence	ATCCACTAGCTGCCCGGCCGGCCGGCTAGCGGAGAAACAGCCCGCCCGCTCGCCTCTGCC TCTGCCCCTGCACGCCCAAGATCCTCAGGCCGGGCCGGCCGCGTGGCAGTGCCGCGCGCG CGCGAGAGCGAGAGGGATCCATGGGCGTCTCCGAGGAGGCGGCGCGGGTGTGGGCGGAGC TGCCCGTGCGGGTGGACTGGGCGGCCGCGGCGGCGCAATGCGCGTCCCTGTGGGCGCACG CGCGCGCGCTGCTGGTCGCGCCAGCGGTGCGGGTCCTGGTGCTCCTGTCGCTGGCGATGA CCGTGATGATACTGGCGGAGAAGCTGTTCGTCTGCGCCGTGTGCCTCGCCGTGCGGGCGC TCCGGCTCGGCCCGGACCGGCGCTACCGCTGGGAGCCCATCGGCGGCGGAGTCGGAGACG AGGAGGAGGAGTCCGGGTCCGGCCACGGCGCCAAGTACCCCATGGTGCTCGTGCAGATCC CTATGTACAACGAGCGGGAGGTGTACAAGCTGTCGATCGGGGCGGCATGCGAGCTGGAGT GGCCGTCGGAGCGCTTCATGATCCAGGTGCTGGACGACTCCACGGACCCCGTTGTAAAGG ATTTGGTGGAGACGGAATGCCAAAGATGGAAGAGCAAAGGCGTGAATATAAAGTACGAGG TGAGGGGGAACCGGAAGGGGTACAAGGCCGGCGCGCTCAAGGAAGGACTGAAGCATGACT ACGTCGAAGACTGCGAGTACATCGCCATGTTCGATGCTGACTTCCAGCCCGAGCCTGATT TCCTCCTAAGGGCTGTCCCATTCCTTGTGCATAACCCGGAGATCGCCCTCGTCCAAGCTC GCTGGAAATTCGTTAATTCTGGTGAGTGTCTGCTGACGAGATTCCAAGAAATGTCCTTGG ACTACCATTTCAAGTATGAGCAAGAGGCAGGCTCCTCACTGCATTCATTCTTTGGCTTCA ATGGGACAGCCGGTGTCTGGAGGATTGCAGCTATCGATGACGCCGGGGGCTGGAAGGACC GGACGACGGTGGAGGATATGGACCTGGCTGTCCGTGCGATGCTGCAGGGCTGGAAGTTTG TTTACGTCGGCGACATAAAAGTCAAGAGTGAATTGCCTAGCACGTTCAAGGCATACCGGT TTCAGCAGCACAGGTGGTCTTGTGGACCGGCAAACCTGTTCAAGAAAATGATGGTAGAGA TTTTAGAAAACAAGAAAGTGTCATTGTGGAGCAAAATCTACTTATGGTACAATTTCTTCT TCGTTGGGAAGGTCGCTGCCCACACGGTGACATTCATCTACTACTGCTGTGCGATCCCCG TGTCTGTTTTGCTTCCTGAGATTCAGATACCTCTCTGGGGAGTTGTCTATATCCCGACGC TCATAACCCTCTTGAAGGCTCTTGGCACACCAAGTTCGTTTCACCTGGTGATCCTCTGGG TTCTGTTTGAGAATGTCATGTCACTGCACCGGATTAAAGCTGCAGCAAGTGGTCTTCTGG ATGCTGGTGGACGAGTCAATGAGTGGGTTGTCACCGAGAAGTTGGGCGACACCAGCAAGG CAAAGCCTGGCGCCAATGGATCAGATGATGTAAAGGTGATAGATGTAAAGCTAACAGAAC CCCTCGTTCCCAAGCTAGTGAAGAGGCGAGCAAGATTTTGGGAGAGGTACAACTGCTCAG AACTTTTCGTTGGAACCTGCATACTTCTGTGTGGTTTCTATGACTTGCTTTTTGCAAAGA AGGGATACTACATTTTTCTCTTCCTTCAAGGCACGGCTTTCCTTGTTGTTGGCTTTGGGT ATGTCGGCACACTACCTCATTGCAATGCATAAGCTGGCATGGACAATTCATATACCTTCT TACTAGAAACAGATCAAGCAAAGTTCCTCTCTCCTGCCCATATGGAACTTCAATGATAGT TGAGCAATATTCCCATGATCAGTCTTGGCCAGACATGATTCACTGCCAAGAAGGTTGTTC AGATGTCGTCGTCACTCTTCTGTCAGTCTTTATTGTCAAGAAGGCCATTCAAATAGTGTC ACCGTTCCAAATTTATAATAACAGTGTTTACTGAAGCATCATGACATACAAGAATGATTG GTGCAGCAGCATTTAGTAAACATCCCGTAGAGATGCAGTTCACAGTCGTGAAAGAACTGC AGCTGCTGTAAATGGAATAGCACCAGTTGCCAATTTCTGTAGATCTCCGAACTTTTTTTT GGAAATTTTGTGATATTACTCAGAGTTCAGATCAATAATGGAAGATTGTTGGCTTCCTCA GTTCATAACCTGTGTATGCTTAAAACTTGTAAATGTAAATTGTTATTGACACTAATAATT TTGTCGAACCCAGGCAGTTCTT