Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d050382_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:4:84994564:84998406:1 gene:Zm00001d050382 gene_biotype:protein_coding transcript_biotype:protein_coding description:agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein
Sequence

ATGTTCAATGCAACTTCCTCTCTGAAGGTGCGTTTCAAGGTCCCTAAATCCAGACCCAGT
TCAGATGGAGGGCTGAAGAGGAAGCGTGATGCATTCAACGATGATGCTAATCCACAGAAG
TTCATTTCTTCTGGTGCTTCTACTTCTAGGTTTTATGGTGAGAACATCCAACAATTGTGT
CCTGGTTGCCATGTGGAAGTACTCTCTCAAGATAGTGGTATAAGGGGATGTTGGTTTAGA
TGTTTGATTCTGAAGAGGCATAAAGATAAAATCAAGGTGCGCTACCTAGAACTTCAGGAT
GCTGATGAGACTGGAAACTTGGAGGAGTGGGTTATGCTAACACGAGTTGCCAAACCTGAT
CAACTGGGTGTACGTTTCCTTGGAAGGCCAATGGTTCGTCCACAGCGCGTGGAACAAAGC
AAGGCCTCATGCTTTGATGTTGGAGCCATTGTTGATGCGTGGTGGCATGGTGGCTGGTGG
GAGGGAATCGTGCTGTACCAGGTGGGCAGTGGGCGTCTACAAGTTTATTTTCCAGGAGAA
AAGCGAACAGCTGAATTTGGTGAAGATGAGCTGAGGTGTTCCCTTGAGTGGGTTGGTAAC
AAATGGAATCCTTTGAAGGGAAGAAAAGATGTCACAAGCAAGCTGACCTCCACTGCAGAT
TGTGGAAGTGAATATTTGATTGCGAAACAAGATCCACTGAATTTTCATGTGCCTAAAAAT
TCAGAACCTCAACTAGAGGGACATCAATATGACAAGAGGGGTATTGAGAAATCTTCAGTC
AGCACAATTTCACGAGATCAGAAACGTGTCCTTGCCGACCTGACTAATGATTTGAAGTTA
GATAACTTGAGGTGGAGGCCAAGAAAGAGGAGCAGAAGATCTGGCTCAAGAAAGCAGTCG
GACACAAGCAGTGGAAGCAGCAGCGGGGACATGGACCTGTTCAGCCCCAGCCCCAGTGGA
AGCTTTGGTCAACATAATTTAGTGCCTGACGAGGAGACATGCAAGAGCAGTGGAGAGCAG
ACTTTTATGGGTGTGCCTGTGCAGGTTCCCAATCTTGTGATGTCCAGGTGA

Peptide Sequence

PEP ID

Zm00001d050382_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:4:84994564:84998406:1 gene:Zm00001d050382 transcript:Zm00001d050382_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein
Sequence

MFNATSSLKVRFKVPKSRPSSDGGLKRKRDAFNDDANPQKFISSGASTSRFYGENIQQLC
PGCHVEVLSQDSGIRGCWFRCLILKRHKDKIKVRYLELQDADETGNLEEWVMLTRVAKPD
QLGVRFLGRPMVRPQRVEQSKASCFDVGAIVDAWWHGGWWEGIVLYQVGSGRLQVYFPGE
KRTAEFGEDELRCSLEWVGNKWNPLKGRKDVTSKLTSTADCGSEYLIAKQDPLNFHVPKN
SEPQLEGHQYDKRGIEKSSVSTISRDQKRVLADLTNDLKLDNLRWRPRKRSRRSGSRKQS
DTSSGSSSGDMDLFSPSPSGSFGQHNLVPDEETCKSSGEQTFMGVPVQVPNLVMSR

Transcript Sequence

Transcript ID

Zm00001d050382_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:84994564:84998406:1 gene:Zm00001d050382 gene_biotype:protein_coding transcript_biotype:protein_coding description:agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein
Sequence

GCGAAACATTACTTCCATTTCCTGCCGTGTCTAGCCTGTTTGGCAAGAAAAACCGTCTTA
ATCGTATCGTTTTTTTTTCCATTTTGCGGTTAGACCATTAGAGGATTCCTGCACTATGTC
CTTTTGTTTAACTAAATTTGTTCGGCAATTGAGTTAGTGCATTTCGCCTCTCTTTCTAAT
GTTCAGGAAGACTGCTTCTTGATAGACCAAGATCTATGCCTCTTAGCTGTTGGGATTTCC
ATGTGTTCCGTTAGCTGTTCATTGGCTGAGTTTCTGTTTAGTAAAATTGGTTTTGGGTTG
CTTTATTGTTCTTCTAGGAATGACTATGATCTCGCCCGGCTTGTTCAGTAATAATTTGGT
TGCCAGCAAAACTCACGCCTTCTCCTTTTCCATAGGAATATGGAGAATACAGGTGTGCCC
CAGTGGAAGCAGCTGCTGGCTTCCTTTGGGCCAATTGCATAACCTTGGCATTTGGGAATA
GAGATAAGCGAAGCAGCAGCATGAATGTATGCTCCATCAGGTCATAATTATGGTTCCTCC
TCAATGGCAACTAGGTGCAGTAGGGATTCATATGATGACAGTGTTAACAACTGCACACAA
GTTACTGCTTCGAAGGATGTTTCTTCTAGGGAACCTTCAAATGTCTTCACATGGTTAGGA
GCTCCATGTTATTGCCCACAACGTTTGAAGCACTACAAATCTTTCTGCCGTAGAGGAATT
ACTATCTCGGTGCATAGTTTTGTATTCATCATGAGTGAAGAGATGAAGAGACTTATTGCT
TATGTGGAAGATCTCTACGAGGATACAAACTCATGCAACATGGTCAAGGTACAATGGTTC
GACAAAGTTGATGAGTCCTGAGTGTCCAGCACTACGAGAAGTTCAAGGGTGATACCAGAT
ACAACTTGTGGCAACCTTATTTTTGCTGTCGGCAGATTGATAATGGTGACATCAAACCTT
TTGATGTCACACAGCTGCAAGGCTACTGGAGCCAGGAAGTACTTAGGACCATGTTCAATG
CAACTTCCTCTCTGAAGGTGCGTTTCAAGGTCCCTAAATCCAGACCCAGTTCAGATGGAG
GGCTGAAGAGGAAGCGTGATGCATTCAACGATGATGCTAATCCACAGAAGTTCATTTCTT
CTGGTGCTTCTACTTCTAGGTTTTATGGTGAGAACATCCAACAATTGTGTCCTGGTTGCC
ATGTGGAAGTACTCTCTCAAGATAGTGGTATAAGGGGATGTTGGTTTAGATGTTTGATTC
TGAAGAGGCATAAAGATAAAATCAAGGTGCGCTACCTAGAACTTCAGGATGCTGATGAGA
CTGGAAACTTGGAGGAGTGGGTTATGCTAACACGAGTTGCCAAACCTGATCAACTGGGTG
TACGTTTCCTTGGAAGGCCAATGGTTCGTCCACAGCGCGTGGAACAAAGCAAGGCCTCAT
GCTTTGATGTTGGAGCCATTGTTGATGCGTGGTGGCATGGTGGCTGGTGGGAGGGAATCG
TGCTGTACCAGGTGGGCAGTGGGCGTCTACAAGTTTATTTTCCAGGAGAAAAGCGAACAG
CTGAATTTGGTGAAGATGAGCTGAGGTGTTCCCTTGAGTGGGTTGGTAACAAATGGAATC
CTTTGAAGGGAAGAAAAGATGTCACAAGCAAGCTGACCTCCACTGCAGATTGTGGAAGTG
AATATTTGATTGCGAAACAAGATCCACTGAATTTTCATGTGCCTAAAAATTCAGAACCTC
AACTAGAGGGACATCAATATGACAAGAGGGGTATTGAGAAATCTTCAGTCAGCACAATTT
CACGAGATCAGAAACGTGTCCTTGCCGACCTGACTAATGATTTGAAGTTAGATAACTTGA
GGTGGAGGCCAAGAAAGAGGAGCAGAAGATCTGGCTCAAGAAAGCAGTCGGACACAAGCA
GTGGAAGCAGCAGCGGGGACATGGACCTGTTCAGCCCCAGCCCCAGTGGAAGCTTTGGTC
AACATAATTTAGTGCCTGACGAGGAGACATGCAAGAGCAGTGGAGAGCAGACTTTTATGG
GTGTGCCTGTGCAGGTTCCCAATCTTGTGATGTCCAGGTGAAAGCCATCTTAGCACCGGT
TGAAGATTAACATGTTAGCTTCTGGAGTTACACCGACCTTGGCGAGATGTGGTTTTGTGC
ATCCCCAGGTTATTTTTGCCAGCACAACCCAGATCCAGTTTTCTGCAGTTTTTTTGGAGG
CTCATCAGCTGTGATCAGTTAGATGTGAAAATGTCTCACCAAGAACCAGTATACAGTTTG
TATGTAGGGAGAGAAGAAAATGCTCGGTTTGGTTTTGGTTTTAGAGCTTTCAGTTTTTTT
TCTTTTCTTTTCAATCCTAGTCTTTGTTGTTTGAAGGACAGGTCCTAGATTTGACATAGC
CTCTTTACATCGGTTATTCTTTCCCATAGTTGTCAGTACTTGGTAGTCCTTGTTTTTTAT
TTGTCCATGCAGTCTTGTAGCAGTCGCGCGCCTTACGTAAAATTATCCTGAACTGAACTC
AGTGAAATGTCACAAAATAGTGCTTATTG