Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d050335_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:81955812:81958175:-1 gene:Zm00001d050335 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation efflux family protein
Sequence	ATGTCCGGCCGCCACGCGCCGCACCTCCGGCTGGCCGTGCCGCCGCGGCTCTCCGCGCAC CCCTCTTTCCGCTTCCCCTCCACGCCGCTCCCGACCCCGTCGAAAGCCCGCGGACTCCCT TCCTCCGCCGCCCCGCCGTCCTCCCGCTACGCCGACGGGCTCCTCCGCCTAATCGTGCTG CACGCGCTCTTCCTCCTCGCGCCCGCCGTGCGCGCGCTCCCCTCCCTGGCCCACGCGCTC GCGTTTTCCCCGCCCCTCGCGCTGCTCTCGGCCGCCGCCCTCCTCCTCCACCACTTCGCC GCCGCTTCCCGGAAGACCCACCAGCCTCACCGCCCGTTCCCCGGGTTCCCCGCTCTCGTC CGCCCGGCCTTCCTCCTCGCGCTTTCTATCCTCCTCCGGCTCGTGGCCCTCCGCATCCTC CCCGCCCCGGGCCTCCTCGTCCTCGCGGACTCCGCGGGCTCCCTGCTCGCCCGCGCCCTG CGCCGGCCCTCCCGCCGCCGAGTCATCTCCACCGCCGTCGCCGCCTTATCCCTTGTCTGC ATCTCCCCTTCCCCTTCCGTGATCCTCGCGATCCCCTTCGCCGCTGGCTTCCTTTCCTCG ACCGAACAATCGGCCGCGGCGCGGCATGCCACACGCACTCGGCTCGCCCGGGCGGCGGCA TTTGCTCTCGCTGCTGCCTTTCTCTCTGTGCCAGCGCTTGTGGGTCTCTCCTTTTTCGGT GCCAGCGATGCGGGCGATGGTCCTCCTGATGGAGCAGTGCCGATCGGCCCGGTCTGGTGG CTGCTGCTTAACTCTGCCTTCTTTGGCATGGCTTTGGAGCGACGGCAGGAGCATGGCAGC GGCGGCGGTAGGCCGAGTGTGGATTTTGCACTGACGTTCTTATGCACTCTTGTTCTGGAG CTGCTGTACTACCCAAAGCTGTCTTTACCAGGATTCTTGATTTGTGGGTTCCTCTTGTGG ATCGCCAGCAGGGAGCTGATCCCTGCAGGATATGTGGAGCATGGAACTGAAGATATCTCA GAGTCAGTTTTTGAAGCAATCATGGGTCCAGTTAGGCATATCTTGAGTGAGCGGAAGTCG AGAAAGATTGCTGTGTTTCTATTGATCAATACAGCCTACATGTTTGTGGAATTTGGCTGT GGGTTTGTGAGTGATAGTCTTGGGCTGATCTCTGATGCTTGCCATATGTTGTTTGATTGT GCTGCACTGGCAATTGGTCTCTATGCGTCCTACATTGCGAGATTGCCTGCAAATGGGATG TACAACTTTGGAAGGGGCAGGTTTGAGGTTCTGTCAGGGTATGTCAATGCAGTGTTCTTG GTTCTTGTTGGTGTGCTGATTGTGTTGGAGTCGTTTGAGAGGATTCTTGAGCCTAGGGAA ATATCAACTAGTAGTCTTTTGTCAGTTTCGATAGGTGGACTTGTTGTAAACATAATCGGA TTGGTGTTCTTTCATGAGGAGCACCACCATGCTCATGGTGGTACCTGTTCTCACTCACAT TCTCATTCACATCATGGTCATGAACATCATCAACACCATGGCCATGAAGAGCACAAACAT CATAATCATGATCATCACGGTGCGAATAATGTGAAGGCATGTTGTGATCATCATGGAGAT GACAACCATCGCCATGATCACCATGGGAATAGTAAAAGTGAGGGCATTCATAACAATATC ATGGATAACACCTGCAAGGAGAAGCATGGCCATGAGCATCATCACCATGAACATTCGGAA CATTGCCATCAGAGCAGAGATCATTCTCATCAAAATTGCAACAATATTACTGTTGAGCAA CAGCTTCTTGACATTCCTCTTAGCAATATATCTTCTCATGACACAGAAAGTCACTCTTCA AAAGAAGGATTGAGACCATCAGATTCTGGAAACAGTAATAAGCCAGGACACCGGCACCAC ATTGATCACAACATGGAAGGAATCTTCTTGCATGTCCTAGCTGACACAATGGGAAGCGTT GGTGTTGTAATATCGACCTTACTGATCAAGTACAAGGGATGGCTTATAGCTGATCCGATA TGCTCAGTATTCATTTCTGTAATGATCGTATCTTCTGTTATTCCATTGTTAAGGAATTCT GCGGAAATTCTGTTGCAGAGAGTCCCAAGAAATCATGAAAAGGATTTGGCTGTAGCATTG GATGATGTTATGAAGATCGAGGACGTCCTTGGAGTCAACAATGTTCATGTATGGAACTTA ACTAACACTGACACTGTAGGTACTTTTCAGTTACATGTATCAGCAGAAGCTGACAAGTCT TCCATAAGAAATAAAGCTTCACGGATATTTCAAGAAGCTGGGGTTCAAGATCTGATTATC GAGATTGAGTGTGTTAAAAGGTAG

Peptide Sequence

PEP ID	Zm00001d050335_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:81955812:81958175:-1 gene:Zm00001d050335 transcript:Zm00001d050335_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation efflux family protein
Sequence	MSGRHAPHLRLAVPPRLSAHPSFRFPSTPLPTPSKARGLPSSAAPPSSRYADGLLRLIVL HALFLLAPAVRALPSLAHALAFSPPLALLSAAALLLHHFAAASRKTHQPHRPFPGFPALV RPAFLLALSILLRLVALRILPAPGLLVLADSAGSLLARALRRPSRRRVISTAVAALSLVC ISPSPSVILAIPFAAGFLSSTEQSAAARHATRTRLARAAAFALAAAFLSVPALVGLSFFG ASDAGDGPPDGAVPIGPVWWLLLNSAFFGMALERRQEHGSGGGRPSVDFALTFLCTLVLE LLYYPKLSLPGFLICGFLLWIASRELIPAGYVEHGTEDISESVFEAIMGPVRHILSERKS RKIAVFLLINTAYMFVEFGCGFVSDSLGLISDACHMLFDCAALAIGLYASYIARLPANGM YNFGRGRFEVLSGYVNAVFLVLVGVLIVLESFERILEPREISTSSLLSVSIGGLVVNIIG LVFFHEEHHHAHGGTCSHSHSHSHHGHEHHQHHGHEEHKHHNHDHHGANNVKACCDHHGD DNHRHDHHGNSKSEGIHNNIMDNTCKEKHGHEHHHHEHSEHCHQSRDHSHQNCNNITVEQ QLLDIPLSNISSHDTESHSSKEGLRPSDSGNSNKPGHRHHIDHNMEGIFLHVLADTMGSV GVVISTLLIKYKGWLIADPICSVFISVMIVSSVIPLLRNSAEILLQRVPRNHEKDLAVAL DDVMKIEDVLGVNNVHVWNLTNTDTVGTFQLHVSAEADKSSIRNKASRIFQEAGVQDLII EIECVKR

Transcript Sequence

Transcript ID	Zm00001d050335_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:81955812:81958175:-1 gene:Zm00001d050335 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation efflux family protein
Sequence	ATGTCCGGCCGCCACGCGCCGCACCTCCGGCTGGCCGTGCCGCCGCGGCTCTCCGCGCAC CCCTCTTTCCGCTTCCCCTCCACGCCGCTCCCGACCCCGTCGAAAGCCCGCGGACTCCCT TCCTCCGCCGCCCCGCCGTCCTCCCGCTACGCCGACGGGCTCCTCCGCCTAATCGTGCTG CACGCGCTCTTCCTCCTCGCGCCCGCCGTGCGCGCGCTCCCCTCCCTGGCCCACGCGCTC GCGTTTTCCCCGCCCCTCGCGCTGCTCTCGGCCGCCGCCCTCCTCCTCCACCACTTCGCC GCCGCTTCCCGGAAGACCCACCAGCCTCACCGCCCGTTCCCCGGGTTCCCCGCTCTCGTC CGCCCGGCCTTCCTCCTCGCGCTTTCTATCCTCCTCCGGCTCGTGGCCCTCCGCATCCTC CCCGCCCCGGGCCTCCTCGTCCTCGCGGACTCCGCGGGCTCCCTGCTCGCCCGCGCCCTG CGCCGGCCCTCCCGCCGCCGAGTCATCTCCACCGCCGTCGCCGCCTTATCCCTTGTCTGC ATCTCCCCTTCCCCTTCCGTGATCCTCGCGATCCCCTTCGCCGCTGGCTTCCTTTCCTCG ACCGAACAATCGGCCGCGGCGCGGCATGCCACACGCACTCGGCTCGCCCGGGCGGCGGCA TTTGCTCTCGCTGCTGCCTTTCTCTCTGTGCCAGCGCTTGTGGGTCTCTCCTTTTTCGGT GCCAGCGATGCGGGCGATGGTCCTCCTGATGGAGCAGTGCCGATCGGCCCGGTCTGGTGG CTGCTGCTTAACTCTGCCTTCTTTGGCATGGCTTTGGAGCGACGGCAGGAGCATGGCAGC GGCGGCGGTAGGCCGAGTGTGGATTTTGCACTGACGTTCTTATGCACTCTTGTTCTGGAG CTGCTGTACTACCCAAAGCTGTCTTTACCAGGATTCTTGATTTGTGGGTTCCTCTTGTGG ATCGCCAGCAGGGAGCTGATCCCTGCAGGATATGTGGAGCATGGAACTGAAGATATCTCA GAGTCAGTTTTTGAAGCAATCATGGGTCCAGTTAGGCATATCTTGAGTGAGCGGAAGTCG AGAAAGATTGCTGTGTTTCTATTGATCAATACAGCCTACATGTTTGTGGAATTTGGCTGT GGGTTTGTGAGTGATAGTCTTGGGCTGATCTCTGATGCTTGCCATATGTTGTTTGATTGT GCTGCACTGGCAATTGGTCTCTATGCGTCCTACATTGCGAGATTGCCTGCAAATGGGATG TACAACTTTGGAAGGGGCAGGTTTGAGGTTCTGTCAGGGTATGTCAATGCAGTGTTCTTG GTTCTTGTTGGTGTGCTGATTGTGTTGGAGTCGTTTGAGAGGATTCTTGAGCCTAGGGAA ATATCAACTAGTAGTCTTTTGTCAGTTTCGATAGGTGGACTTGTTGTAAACATAATCGGA TTGGTGTTCTTTCATGAGGAGCACCACCATGCTCATGGTGGTACCTGTTCTCACTCACAT TCTCATTCACATCATGGTCATGAACATCATCAACACCATGGCCATGAAGAGCACAAACAT CATAATCATGATCATCACGGTGCGAATAATGTGAAGGCATGTTGTGATCATCATGGAGAT GACAACCATCGCCATGATCACCATGGGAATAGTAAAAGTGAGGGCATTCATAACAATATC ATGGATAACACCTGCAAGGAGAAGCATGGCCATGAGCATCATCACCATGAACATTCGGAA CATTGCCATCAGAGCAGAGATCATTCTCATCAAAATTGCAACAATATTACTGTTGAGCAA CAGCTTCTTGACATTCCTCTTAGCAATATATCTTCTCATGACACAGAAAGTCACTCTTCA AAAGAAGGATTGAGACCATCAGATTCTGGAAACAGTAATAAGCCAGGACACCGGCACCAC ATTGATCACAACATGGAAGGAATCTTCTTGCATGTCCTAGCTGACACAATGGGAAGCGTT GGTGTTGTAATATCGACCTTACTGATCAAGTACAAGGGATGGCTTATAGCTGATCCGATA TGCTCAGTATTCATTTCTGTAATGATCGTATCTTCTGTTATTCCATTGTTAAGGAATTCT GCGGAAATTCTGTTGCAGAGAGTCCCAAGAAATCATGAAAAGGATTTGGCTGTAGCATTG GATGATGTTATGAAGATCGAGGACGTCCTTGGAGTCAACAATGTTCATGTATGGAACTTA ACTAACACTGACACTGTAGGTACTTTTCAGTTACATGTATCAGCAGAAGCTGACAAGTCT TCCATAAGAAATAAAGCTTCACGGATATTTCAAGAAGCTGGGGTTCAAGATCTGATTATC GAGATTGAGTGTGTTAAAAGGTAG