Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d050320_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:81159444:81162911:-1 gene:Zm00001d050320 gene_biotype:protein_coding transcript_biotype:protein_coding description:HXXXD-type acyl-transferase family protein
Sequence

ATGGAGCCCACGCCAGCGGCGCCGCGCATCCACCTCCAGTCCCCGCAGACTGCCGTGCCG
ACGCGGGCGGTCGAGCCTGGGCGGACGCGCCGCATCACCGTGGCCGCGCCCCCGCTCCCA
CCGGCCGCGCTGCAGCGGCGCACTCGCGTGGTGCTCTACTACCGCGCGGACGCCGCTGGC
GCGGACGGCCGGGCCTCGGTGCGGCTGTGGGAGGAGGCGATGTGGGCGAAGGAGTCGCTG
AGCGAGGCCGTGGCCGACCACCCGGAGATGGGCGGCCGGCTCCGGCGCCACGCCGACGGG
TCGTGGGAGGTAAAGCTGAACGACGCCGGCGTGAGATTCACAGAGGCCACGGCAGAGGCG
ACCCTCGACGAGTTCCTGGCGACCGCCCAGGACAAGGACCGGGCGCCTAGCTGGGAGGCC
GCCCTGGCGCCGTGGGCCGACGTGAACGCGGAGGACCCCGACGTGAGCGCGCTCGTCTAC
GTGCAGCTGACACGGTTCCAGGGAGACGGAGGCTTCGCCGTGGGCGTAAGCTGCAGCCTG
ATGCTGTCCGACCCGCTGTCACTGGCGAGGTTCCTGGCGTCGTGGGCGCGCACGCACGCC
AGGATGAAGGCTCAGAACGACGCCGCCGCCCACCCGCTGATGCAGTACGCGAGCTACTTC
CGGCGCCCGGACGCCAGGGCCGCGCGCGCGCTCGTCAAGTCCGTCCCCCTCGACGCCTTC
GCCTCCGCCGACGCCGCCGAGACCGTCCTCTTCAGAGCCAGACCTACCATGCTGCCCGCC
GGCGCGGGCGCACCACCGGCGCCCGACCACCGCGCGCTCGCCGTCGCCTGTGTCGCCCAG
GCGCGGGAACGGCTCGGCGATGGCAAGGTGGTGCCGCCGCAGTTCCCGCTCGTCGTCTTC
GACTGCGAAGGCGGTGTGAGCGTCGAGACGTGCGCGGCGGCGGCTTACGGGCAGCCGCCG
TCGCCGAGCGGCGGCGGGCGGTACAAGATTGACGTTGCCCTGTGGGAGGAGCTCGGGCTG
GAGGAGCTGGTGCTCAGGGACAGCAAGCCACTGCACGTGTCGTACAGCATCCTCGGCGCT
GGCTGCGATGGGCTCGCCGTCGCGATGCCTGCCGGCGCTGCCGGTGAGCTCCTTGTCGCG
GCGACGGTCCCCAAACCCAAGTGA

Peptide Sequence

PEP ID

Zm00001d050320_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:81159444:81162911:-1 gene:Zm00001d050320 transcript:Zm00001d050320_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:HXXXD-type acyl-transferase family protein
Sequence

MEPTPAAPRIHLQSPQTAVPTRAVEPGRTRRITVAAPPLPPAALQRRTRVVLYYRADAAG
ADGRASVRLWEEAMWAKESLSEAVADHPEMGGRLRRHADGSWEVKLNDAGVRFTEATAEA
TLDEFLATAQDKDRAPSWEAALAPWADVNAEDPDVSALVYVQLTRFQGDGGFAVGVSCSL
MLSDPLSLARFLASWARTHARMKAQNDAAAHPLMQYASYFRRPDARAARALVKSVPLDAF
ASADAAETVLFRARPTMLPAGAGAPPAPDHRALAVACVAQARERLGDGKVVPPQFPLVVF
DCEGGVSVETCAAAAYGQPPSPSGGGRYKIDVALWEELGLEELVLRDSKPLHVSYSILGA
GCDGLAVAMPAGAAGELLVAATVPKPK

Transcript Sequence

Transcript ID

Zm00001d050320_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:81159444:81162911:-1 gene:Zm00001d050320 gene_biotype:protein_coding transcript_biotype:protein_coding description:HXXXD-type acyl-transferase family protein
Sequence

CCAGGCCGCAAGCTTTTAAGGGGCCAGCGAGCAGGCAGTTCTCGTGTATCAACGAGCAGG
CGTGCACATGGAGCCCACGCCAGCGGCGCCGCGCATCCACCTCCAGTCCCCGCAGACTGC
CGTGCCGACGCGGGCGGTCGAGCCTGGGCGGACGCGCCGCATCACCGTGGCCGCGCCCCC
GCTCCCACCGGCCGCGCTGCAGCGGCGCACTCGCGTGGTGCTCTACTACCGCGCGGACGC
CGCTGGCGCGGACGGCCGGGCCTCGGTGCGGCTGTGGGAGGAGGCGATGTGGGCGAAGGA
GTCGCTGAGCGAGGCCGTGGCCGACCACCCGGAGATGGGCGGCCGGCTCCGGCGCCACGC
CGACGGGTCGTGGGAGGTAAAGCTGAACGACGCCGGCGTGAGATTCACAGAGGCCACGGC
AGAGGCGACCCTCGACGAGTTCCTGGCGACCGCCCAGGACAAGGACCGGGCGCCTAGCTG
GGAGGCCGCCCTGGCGCCGTGGGCCGACGTGAACGCGGAGGACCCCGACGTGAGCGCGCT
CGTCTACGTGCAGCTGACACGGTTCCAGGGAGACGGAGGCTTCGCCGTGGGCGTAAGCTG
CAGCCTGATGCTGTCCGACCCGCTGTCACTGGCGAGGTTCCTGGCGTCGTGGGCGCGCAC
GCACGCCAGGATGAAGGCTCAGAACGACGCCGCCGCCCACCCGCTGATGCAGTACGCGAG
CTACTTCCGGCGCCCGGACGCCAGGGCCGCGCGCGCGCTCGTCAAGTCCGTCCCCCTCGA
CGCCTTCGCCTCCGCCGACGCCGCCGAGACCGTCCTCTTCAGAGCCAGACCTACCATGCT
GCCCGCCGGCGCGGGCGCACCACCGGCGCCCGACCACCGCGCGCTCGCCGTCGCCTGTGT
CGCCCAGGCGCGGGAACGGCTCGGCGATGGCAAGGTGGTGCCGCCGCAGTTCCCGCTCGT
CGTCTTCGACTGCGAAGGCGGTGTGAGCGTCGAGACGTGCGCGGCGGCGGCTTACGGGCA
GCCGCCGTCGCCGAGCGGCGGCGGGCGGTACAAGATTGACGTTGCCCTGTGGGAGGAGCT
CGGGCTGGAGGAGCTGGTGCTCAGGGACAGCAAGCCACTGCACGTGTCGTACAGCATCCT
CGGCGCTGGCTGCGATGGGCTCGCCGTCGCGATGCCTGCCGGCGCTGCCGGTGAGCTCCT
TGTCGCGGCGACGGTCCCCAAACCCAAGTGAAGATACATCGGCAGGCAGGCTCTGGCAGC
TAGCCGGGGCGCGAAAGTTCCCGTGCCGTCCGATATCTGTGGTACTGATTTCTACGGTGT
TTATAAATTAAAATTACAGCAAAACAAAAAAAAATTATAGTATTTGTGTGTGAAAATACA
GAGAATAAGACAATACTGTAAACCAATCACAGTTGTGGATTTTCAACAATATTGCCCATC
AAATAAATGCAACGTTTGTGAACC