Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d050319_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:81114782:81118190:-1 gene:Zm00001d050319 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein CHAPERONE-LIKE PROTEIN OF POR1 chloroplastic
Sequence

ATGCAAGCCGCCGCCGCCTTCAACCAGGCAGCCTTCACCGTCCGCTCGCTGCATCGCCCC
CCGAGGCCCCTCCATCTAGCTGTTGCGGAGGATGCTTTTGCGGGGATAAGAGGCGCGCCC
CTTACACGGCCCCGGTGCTGCGGGAGCCTCTCTGTCGGCGTCGGCAGCTACGACAGCGAG
CACACTCCAGTATTTCCAAGACAACAATCATGGGATCCCTACAAGCTTCTTGGTGTTGAT
CAAGATGCATCTGAAGAAGAGGTCCGGAGTGCACGGAATTTTCTTCTAAAACAATACGCC
GGATATGAAGAAAGTGAAGAGGCCATTGAAGGTGCTTATGACAAGATAATAATGAATAGC
TACACAGACCGTAAGAAATCCAAATTCAATCTGAAAAGCAAGCTAAAAGAGCAAGTTGAA
GGATCCCCATCATGGCTTAAGGCACTGTTTGGATATTTTGAGGTGCCATCACTAGAGATC
ATTTCAAGGAGATTTGCCTTTTTTGCGTTCTTTGCCGGGTGGAGCATTGCAACTTCTGCT
GAGACTGGGCCTGCCTTTCAGCTTGCGATGTCACTCGCCTCATGCATATACTTCCTCAAT
GAGAAGATGAAGAATCTTGTCAGGGCGTCCACCACAGGGTTCGGAATCTTTGTGGGTGGC
TGGATCTTGGGTTCTCTTCTTGTTCCAGTGATCCCAGCTTTCGTCATCCCGCCTACATGG
TCCCTTGAGCTCCTTACTTCGCTGACAGCTTATGCTTTCATGTTCGTGGGTTGCACTTTC
CTCAAGTGA

Peptide Sequence

PEP ID

Zm00001d050319_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:81114782:81118190:-1 gene:Zm00001d050319 transcript:Zm00001d050319_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein CHAPERONE-LIKE PROTEIN OF POR1 chloroplastic
Sequence

MQAAAAFNQAAFTVRSLHRPPRPLHLAVAEDAFAGIRGAPLTRPRCCGSLSVGVGSYDSE
HTPVFPRQQSWDPYKLLGVDQDASEEEVRSARNFLLKQYAGYEESEEAIEGAYDKIIMNS
YTDRKKSKFNLKSKLKEQVEGSPSWLKALFGYFEVPSLEIISRRFAFFAFFAGWSIATSA
ETGPAFQLAMSLASCIYFLNEKMKNLVRASTTGFGIFVGGWILGSLLVPVIPAFVIPPTW
SLELLTSLTAYAFMFVGCTFLK

Transcript Sequence

Transcript ID

Zm00001d050319_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:81114782:81118190:-1 gene:Zm00001d050319 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein CHAPERONE-LIKE PROTEIN OF POR1 chloroplastic
Sequence

ATAGATCCAATTGTTCCTTAAAATTACGACTCGCACCCACGGACCCACCAACCACGCCGC
CGCCGGCCGGCCACCTTTCTCCATTCTCCGTCAATCGTCATCCTATCCGATCCCCAACTA
GGCAACTACTCCGTCTCACGCCTCTCCTGTCCCCTCTCGCCGCTCTCGCCCCGCCTCTGC
CTCCGCCTCCGCCTCCTCCATCGCACCCAGCTTTCCTCCCCACCCCACCGCCACTCCTAC
CCCGCCACGTCGTGTAGTCGCGGCGGCGGATATGCAAGCCGCCGCCGCCTTCAACCAGGC
AGCCTTCACCGTCCGCTCGCTGCATCGCCCCCCGAGGCCCCTCCATCTAGCTGTTGCGGA
GGATGCTTTTGCGGGGATAAGAGGCGCGCCCCTTACACGGCCCCGGTGCTGCGGGAGCCT
CTCTGTCGGCGTCGGCAGCTACGACAGCGAGCACACTCCAGTATTTCCAAGACAACAATC
ATGGGATCCCTACAAGCTTCTTGGTGTTGATCAAGATGCATCTGAAGAAGAGGTCCGGAG
TGCACGGAATTTTCTTCTAAAACAATACGCCGGATATGAAGAAAGTGAAGAGGCCATTGA
AGGTGCTTATGACAAGATAATAATGAATAGCTACACAGACCGTAAGAAATCCAAATTCAA
TCTGAAAAGCAAGCTAAAAGAGCAAGTTGAAGGATCCCCATCATGGCTTAAGGCACTGTT
TGGATATTTTGAGGTGCCATCACTAGAGATCATTTCAAGGAGATTTGCCTTTTTTGCGTT
CTTTGCCGGGTGGAGCATTGCAACTTCTGCTGAGACTGGGCCTGCCTTTCAGCTTGCGAT
GTCACTCGCCTCATGCATATACTTCCTCAATGAGAAGATGAAGAATCTTGTCAGGGCGTC
CACCACAGGGTTCGGAATCTTTGTGGGTGGCTGGATCTTGGGTTCTCTTCTTGTTCCAGT
GATCCCAGCTTTCGTCATCCCGCCTACATGGTCCCTTGAGCTCCTTACTTCGCTGACAGC
TTATGCTTTCATGTTCGTGGGTTGCACTTTCCTCAAGTGAAACTTAGCAGCAGTTCACCA
AGTGGAAATTCCTGCGGTCATCACGAAGGAAATTGCTCTTGCTAACATCTCCACAGCAGA
TCCCAACTTACTGATAAGCGGCCTGCTTCACAATTTTTTTTTGTCCGAGAGAGTATGATG
ATCTTTACGTTATTGTTGTTGTTGTTACATGTATAATATAACATTTTAGCAACCAGACAA
TTTCGATGGATATTGAAAAGGGATACACGTTGGATTCTTCC