Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d050316_T035
CDS Infomation	cds chromosome:B73_RefGen_v4:4:80724450:80730255:-1 gene:Zm00001d050316 gene_biotype:protein_coding transcript_biotype:protein_coding description:splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein
Sequence	ATGGCTGCCGTCGCGCCTCCGCCCGACAACATGGACCCGCCGCCGGCCACTCCCCCAGCC GCCACTCCTGCCGCGACGCTAACCCCGCCTCCCGCCGCCACCTCCACCCCGCCAAACCCC GCGACGCCCGGCCCCGCGGCGCCTAGTCCAAACCCTAACCTGCCCCCCGCCCCCGCTTCC GCGCCTCCGGCGGCATTTGCGCCACCGATGCCCCCAGCTCCGGTCTCTTTCGCCGCTACC TTCCGCCCGCTCGGTGCTCCTGCGCCACCGCCGCCGCACCAGGTCCCGCAGTACGGCGCG TTGCCGCCGAACCCGGGCTACCCGATGCCGCCGCCGATGCAGCCGCCGGGCGTCCCCGTC GTCATGCCTCCGGGCTCCGTTCGGCCGCCGGTCATGTACGGACCGCCCCAGCCGGGAGCA TACATGCCGCAGCAGGGCGCTGCGGTCCCCCATCCTGGAATGCCTCGTTATCCTGCACCG TATCCTATGGTTCGTCCAGGTTTTGTTCCACGTCCAATGCCGCCACCTGGTGTTGTGACA ATTCAACGACCACCAATAATTTCTGGGATCCGGGCTATTCCTCCTTTGGTAGCCCTGACT GCCCGTCCACCTCCTCCAGCTGTTATGCTGGCTGATAAACCGCCAACCGCAGTTTATGTT GGCAAGATTGCCCCAACAGTAGACAATGGTTTCCTTCTTTCACTTCTCCAGCTTTGTGGA CCTGTCAAGAGTTGGAAGCGTGCCGAAGATCCAAGTAATGGAAAACCTAAAGGTTTTGGG TTTTGTGAGTTTGAATCTGCTGAAGGCATCCTTCGTGCGACACGGCTTCTCAACAAATTG AGCCTTGATGGTCAGGAACTGGTGATTAATATAAATGATGCCACCAAGGAGTACCTGAAG AAACATGTTGAGGAAAAGAAGAGAGCACAAGTGAAGTCAAAAGATGCAAGTGGGGATGGA ACTACAGCTGTTGCTGAAAATGAATCATCAAAATCTGTTCCTGATGAATCAGATAAGGAG ACAGGAGATGCTGGAGACAAGGACAGTGACGAGAGCACTAAGAAATTTGGGATTGTTACT GATGAAGACTCTCAAGCTGATAAAGACGTCGCAGAAAAAATAAGCAGTATGATTGAGCAG TGGTTAAAGACTAGACCGCCACCTCCACCTCCACCAGTTCAACCATCGGCGGATAGCTCT GGTGTAGATAAGGCAAAAAATGATTCTGCTGATAAGACTGATGCTGACACTGTTAAAAGA GCAGTCAATGAAACTGAAAGATCTGAAACTGCCTCTCCTGATAGGAGGAAGGATAGAGAG CATGATAAGGATAAACGGGACAAAGATATTGAAAGGCATGACCGTGAACGCGAACGTGAA AGGATACGGAGGGATAGGGAGAAGGATCATAAGCATAGAGAAGTTGATAGACTATACAGG GATCGCCTTAAGGAGTGGGAATCTAGGGAGAGAGAGAAAGAATATCAGAGATATAGTGAA AAGGAGAAAGAAAAAGATAGAGAACATAACCGCAGAAGGGAGATCCTGAAGCAGGAAGAT GAGAGCGACGAAGAGGATAATAGGAAAAGGAAGCGAAGGAGTAGTAGTTCACTTGAAGAT AGGAAAAGAAGGCGGCAACGTGAAAAGGAGGAAGATTTGGCAGATAAAATAAGGGAGGAA GAGGAAATTGCAGAAGCAAGGCGGCGGGCTGTAGAGTTGCAACAGCAAGCAGATGAAGCA GCTGCAGCAGCGGCTGCAGCTGCTGAAGAGTCTGCTACACTTATGGAGGTTGATGCTGAC GACGAAAAAGAAACAGATGCACAAAACGAGCCGTCTGTTGTGGAAGCTGATAACATCCCG AGCTTTGCTAATAGTGTTGGTGCTGTTTCATTCTTTTCTTTTTCTCATTGGCCAGGTGGA CTTGGTAAGGAAAATAACAGTGAGGAAATAAGCATGGTACCTAGTCATACCAAGCAAAAC AACAATGTCCCAGTAAAGAAACTGGGTTTTGGTTTGATTGGCTTGGGCAAAAGGACATCT GTTCCATCAGTTTTTGCTGAAGAGGATGATGAAAATAATGTTGATAAAAGCATAAGACCT CTAGTACCTATCGACTACAATGAAGAATTACAAGCCGTACAGGCTAATTCTTCGACTGGG GCAAATGTCGCAGCAGCTGCTGAGTTTGCCAAGCGCATCTCAGTTTCTAACTCAAAGGAA GAGAAGGCTGACACAGAGAAGGATAGGAATAGGAGATCCAGTGAAGGTCGTCCTAGCGAT GAGCGAAGAGAGAAGCTACATGATCGTGAGAAGGATAAGTCCAAGTCGGAGAACAAGAAG ATTCTGGATGCAAAGCAATTAATTGATATGATCCCAAGGACAAAGGAAGAACTTTTTGCC TATGATATAAACTGGGTGATATATGACAAGAATGAGTTGCACGAGAGAATGAGGCCTTGG ATTTCAAAAAAGATTATTGAATTTCTTGGCGAGGAGGAATCAACTTTGGTGGACTATATT GTTTCCTGCACCAAAGACCACGTTCAGGCAGAAAAGATGCTAGAGCTCCTACAGTCGATT TTGGATGTTGAGGCTGAGATGTTTGTTCTCAAGATGTGGCGGATGCTGATATTTGAGATT AAGAAAGTCGAATCTGGACTATCAGGAAGAGCAAAGTAA

Peptide Sequence

PEP ID	Zm00001d050316_P035
PEP Infomation	pep chromosome:B73_RefGen_v4:4:80724450:80730255:-1 gene:Zm00001d050316 transcript:Zm00001d050316_T035 gene_biotype:protein_coding transcript_biotype:protein_coding description:splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein
Sequence	MAAVAPPPDNMDPPPATPPAATPAATLTPPPAATSTPPNPATPGPAAPSPNPNLPPAPAS APPAAFAPPMPPAPVSFAATFRPLGAPAPPPPHQVPQYGALPPNPGYPMPPPMQPPGVPV VMPPGSVRPPVMYGPPQPGAYMPQQGAAVPHPGMPRYPAPYPMVRPGFVPRPMPPPGVVT IQRPPIISGIRAIPPLVALTARPPPPAVMLADKPPTAVYVGKIAPTVDNGFLLSLLQLCG PVKSWKRAEDPSNGKPKGFGFCEFESAEGILRATRLLNKLSLDGQELVININDATKEYLK KHVEEKKRAQVKSKDASGDGTTAVAENESSKSVPDESDKETGDAGDKDSDESTKKFGIVT DEDSQADKDVAEKISSMIEQWLKTRPPPPPPPVQPSADSSGVDKAKNDSADKTDADTVKR AVNETERSETASPDRRKDREHDKDKRDKDIERHDRERERERIRRDREKDHKHREVDRLYR DRLKEWESREREKEYQRYSEKEKEKDREHNRRREILKQEDESDEEDNRKRKRRSSSSLED RKRRRQREKEEDLADKIREEEEIAEARRRAVELQQQADEAAAAAAAAAEESATLMEVDAD DEKETDAQNEPSVVEADNIPSFANSVGAVSFFSFSHWPGGLGKENNSEEISMVPSHTKQN NNVPVKKLGFGLIGLGKRTSVPSVFAEEDDENNVDKSIRPLVPIDYNEELQAVQANSSTG ANVAAAAEFAKRISVSNSKEEKADTEKDRNRRSSEGRPSDERREKLHDREKDKSKSENKK ILDAKQLIDMIPRTKEELFAYDINWVIYDKNELHERMRPWISKKIIEFLGEEESTLVDYI VSCTKDHVQAEKMLELLQSILDVEAEMFVLKMWRMLIFEIKKVESGLSGRAK

Transcript Sequence

Transcript ID	Zm00001d050316_T035
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:80724450:80730255:-1 gene:Zm00001d050316 gene_biotype:protein_coding transcript_biotype:protein_coding description:splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein
Sequence	GAACCCAAACCAAACCACCGTCTCCTTGGCGGCTCCGCCCTACCACCATGGCTGCCGTCG CGCCTCCGCCCGACAACATGGACCCGCCGCCGGCCACTCCCCCAGCCGCCACTCCTGCCG CGACGCTAACCCCGCCTCCCGCCGCCACCTCCACCCCGCCAAACCCCGCGACGCCCGGCC CCGCGGCGCCTAGTCCAAACCCTAACCTGCCCCCCGCCCCCGCTTCCGCGCCTCCGGCGG CATTTGCGCCACCGATGCCCCCAGCTCCGGTCTCTTTCGCCGCTACCTTCCGCCCGCTCG GTGCTCCTGCGCCACCGCCGCCGCACCAGGTCCCGCAGTACGGCGCGTTGCCGCCGAACC CGGGCTACCCGATGCCGCCGCCGATGCAGCCGCCGGGCGTCCCCGTCGTCATGCCTCCGG GCTCCGTTCGGCCGCCGGTCATGTACGGACCGCCCCAGCCGGGAGCATACATGCCGCAGC AGGGCGCTGCGGTCCCCCATCCTGGAATGCCTCGTTATCCTGCACCGTATCCTATGGTTC GTCCAGGTTTTGTTCCACGTCCAATGCCGCCACCTGGTGTTGTGACAATTCAACGACCAC CAATAATTTCTGGGATCCGGGCTATTCCTCCTTTGGTAGCCCTGACTGCCCGTCCACCTC CTCCAGCTGTTATGCTGGCTGATAAACCGCCAACCGCAGTTTATGTTGGCAAGATTGCCC CAACAGTAGACAATGGTTTCCTTCTTTCACTTCTCCAGCTTTGTGGACCTGTCAAGAGTT GGAAGCGTGCCGAAGATCCAAGTAATGGAAAACCTAAAGGTTTTGGGTTTTGTGAGTTTG AATCTGCTGAAGGCATCCTTCGTGCGACACGGCTTCTCAACAAATTGAGCCTTGATGGTC AGGAACTGGTGATTAATATAAATGATGCCACCAAGGAGTACCTGAAGAAACATGTTGAGG AAAAGAAGAGAGCACAAGTGAAGTCAAAAGATGCAAGTGGGGATGGAACTACAGCTGTTG CTGAAAATGAATCATCAAAATCTGTTCCTGATGAATCAGATAAGGAGACAGGAGATGCTG GAGACAAGGACAGTGACGAGAGCACTAAGAAATTTGGGATTGTTACTGATGAAGACTCTC AAGCTGATAAAGACGTCGCAGAAAAAATAAGCAGTATGATTGAGCAGTGGTTAAAGACTA GACCGCCACCTCCACCTCCACCAGTTCAACCATCGGCGGATAGCTCTGGTGTAGATAAGG CAAAAAATGATTCTGCTGATAAGACTGATGCTGACACTGTTAAAAGAGCAGTCAATGAAA CTGAAAGATCTGAAACTGCCTCTCCTGATAGGAGGAAGGATAGAGAGCATGATAAGGATA AACGGGACAAAGATATTGAAAGGCATGACCGTGAACGCGAACGTGAAAGGATACGGAGGG ATAGGGAGAAGGATCATAAGCATAGAGAAGTTGATAGACTATACAGGGATCGCCTTAAGG AGTGGGAATCTAGGGAGAGAGAGAAAGAATATCAGAGATATAGTGAAAAGGAGAAAGAAA AAGATAGAGAACATAACCGCAGAAGGGAGATCCTGAAGCAGGAAGATGAGAGCGACGAAG AGGATAATAGGAAAAGGAAGCGAAGGAGTAGTAGTTCACTTGAAGATAGGAAAAGAAGGC GGCAACGTGAAAAGGAGGAAGATTTGGCAGATAAAATAAGGGAGGAAGAGGAAATTGCAG AAGCAAGGCGGCGGGCTGTAGAGTTGCAACAGCAAGCAGATGAAGCAGCTGCAGCAGCGG CTGCAGCTGCTGAAGAGTCTGCTACACTTATGGAGGTTGATGCTGACGACGAAAAAGAAA CAGATGCACAAAACGAGCCGTCTGTTGTGGAAGCTGATAACATCCCGAGCTTTGCTAATA GTGTTGGTGCTGTTTCATTCTTTTCTTTTTCTCATTGGCCAGGTGGACTTGGTAAGGAAA ATAACAGTGAGGAAATAAGCATGGTACCTAGTCATACCAAGCAAAACAACAATGTCCCAG TAAAGAAACTGGGTTTTGGTTTGATTGGCTTGGGCAAAAGGACATCTGTTCCATCAGTTT TTGCTGAAGAGGATGATGAAAATAATGTTGATAAAAGCATAAGACCTCTAGTACCTATCG ACTACAATGAAGAATTACAAGCCGTACAGGCTAATTCTTCGACTGGGGCAAATGTCGCAG CAGCTGCTGAGTTTGCCAAGCGCATCTCAGTTTCTAACTCAAAGGAAGAGAAGGCTGACA CAGAGAAGGATAGGAATAGGAGATCCAGTGAAGGTCGTCCTAGCGATGAGCGAAGAGAGA AGCTACATGATCGTGAGAAGGATAAGTCCAAGTCGGAGAACAAGAAGATTCTGGATGCAA AGCAATTAATTGATATGATCCCAAGGACAAAGGAAGAACTTTTTGCCTATGATATAAACT GGGTGATATATGACAAGAATGAGTTGCACGAGAGAATGAGGCCTTGGATTTCAAAAAAGA TTATTGAATTTCTTGGCGAGGAGGAATCAACTTTGGTGGACTATATTGTTTCCTGCACCA AAGACCACGTTCAGGCAGAAAAGATGCTAGAGCTCCTACAGTCGATTTTGGATGTTGAGG CTGAGATGTTTGTTCTCAAGATGTGGCGGATGCTGATATTTGAGATTAAGAAAGTCGAAT CTGGACTATCAGGAAGAGCAAAGTAATGAAGCTAAGCCTGTTACCTTGTATGACCTTTGA TTTACATCACTCAACTGTGGTCATGCTTGTAAGGTCATACTGTACTAAACAAGCATCAGA AACCATTTTTAATGATGCTGAGTGGACGGTTTTGATTCTACACTTCCCTTGTAGAAATGT ATACGAGAATTAATGAGAGACTGCGTAATT