Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d050304_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:4:80218294:80223395:1 gene:Zm00001d050304 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein
Sequence

ATGGAGGACAGAGTTTTCCAAGAGTTACCTGATGATTTCTGGGACACTCCTCGAGCTAGA
GCCAGCTATAAAGTTAAGCTTGATGATTCTGATTCTGATTTTGAGTCTGCCCTGCTAGAA
CAAGCAAGACAGTGCCTTCATATCTCAAGTCATAGAACGTCCCAGAGCACATCAAAGCAT
AAGGGAAACTTGTCACACTTGCTTCACAATGAAGTTCCTATCCGGATGGGAGAAAGGAAC
AATCTTACTGAAAACTCTGAAAATGATAGTTTGTCTGACAGCTTCAGTGAACCTCAGACT
TCAGATACTCTGTGTATAGAAGCTCAAAGAAAATCAAGTGCACCATCATCATCACTTAGA
CAAAGTACCCTAGATTCTCTATATGAATTTGGTGAAACTAGTAGGCATGAACCAGCAGGA
AGAAAAAAACTAGACAACGTTGAATTAAGGGAGACTTCAAGAAGCTTACTTCCATTTGAT
TTGTCAGGACAGGAACCAGCTTTCTGTACTCAGGAGCAAGTAGATAAATGTAGCCTTGGC
ACTCTAGCTGATAAAAAACCCATGGAAAAATCATCTAATATGGAAAGGCAACCAGAATTA
TCATGGATTAGCAATAGCCTCACTTTGCTCTAG

Peptide Sequence

PEP ID

Zm00001d050304_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:4:80218294:80223395:1 gene:Zm00001d050304 transcript:Zm00001d050304_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein
Sequence

MEDRVFQELPDDFWDTPRARASYKVKLDDSDSDFESALLEQARQCLHISSHRTSQSTSKH
KGNLSHLLHNEVPIRMGERNNLTENSENDSLSDSFSEPQTSDTLCIEAQRKSSAPSSSLR
QSTLDSLYEFGETSRHEPAGRKKLDNVELRETSRSLLPFDLSGQEPAFCTQEQVDKCSLG
TLADKKPMEKSSNMERQPELSWISNSLTLL

Transcript Sequence

Transcript ID

Zm00001d050304_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:80218294:80223395:1 gene:Zm00001d050304 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein
Sequence

TTTCCCCACTCCTGTAGTGCCGCCGCCGTGTTCCGGTGATCCGCCATCCGCCTCCGTTCG
CCGTCCCCCGCTTGTCCCGTTAGTGGTTTTCGTCCTTCTGGTTCACTCGCCGGCGGACTA
CATGCTGATCGACGGGATGAGGTCCGTGGTCGCCACGGTGAGCGGTTACCACGGCGACGA
GCGGCATAGGCTTGTAAACCTCATTGCGGAGACCGGTGCTAGCTACGTAGGATCAATGAG
CAGATCCATCACCCACCTGGTGTGCTGGAGGCTCGAGGGGAAGAAGTACGACATCGCGAG
GAGGCTGGGGACACGCGTTGTGAGCCACTGGTGGTTCACGGAGTGTCTCAGGGAGGGGAG
GCGCCTCCCAGAGGACCCGTACTTTATGTGGTGAAGAAGCAGGGCCAGTCCCAGAGCTGC
CTTCTCGTTCCCGTAAACAAGTCAAGAAAAATGCCATCATGGAGGACAGAGTTTTCCAAG
AGTTACCTGATGATTTCTGGGACACTCCTCGAGCTAGAGCCAGCTATAAAGTTAAGCTTG
ATGATTCTGATTCTGATTTTGAGTCTGCCCTGCTAGAACAAGCAAGACAGTGCCTTCATA
TCTCAAGTCATAGAACGTCCCAGAGCACATCAAAGCATAAGGGAAACTTGTCACACTTGC
TTCACAATGAAGTTCCTATCCGGATGGGAGAAAGGAACAATCTTACTGAAAACTCTGAAA
ATGATAGTTTGTCTGACAGCTTCAGTGAACCTCAGACTTCAGATACTCTGTGTATAGAAG
CTCAAAGAAAATCAAGTGCACCATCATCATCACTTAGACAAAGTACCCTAGATTCTCTAT
ATGAATTTGGTGAAACTAGTAGGCATGAACCAGCAGGAAGAAAAAAACTAGACAACGTTG
AATTAAGGGAGACTTCAAGAAGCTTACTTCCATTTGATTTGTCAGGACAGGAACCAGCTT
TCTGTACTCAGGAGCAAGTAGATAAATGTAGCCTTGGCACTCTAGCTGATAAAAAACCCA
TGGAAAAATCATCTAATATGGAAAGGCAACCAGAATTATCATGGATTAGCAATAGCCTCA
CTTTGCTCTAGTATATTTAGTTTCTTTTTCCATCACCATTAATGTTCAACAAGCAATGGC
TATTCTTAGAGTTGCATCCTGCGTTTCAGGCTTCTAGGGGTAAAGTCTCAACATGTCCCC
TTTGCAAAGCCAGTTTCACATGTATCAGTAAGGTGGACGAGGCAGGCACCTCAGATCAGA
AGATATACTCGCAGACCATTCCCTGTGAAGCTTCTACTGATGTTTTTGTGTCGGGCAATG
TAGGCTACGATTTCTCTCGACCAACGTCTGGGCAAGGAGCATGCTACCAGTGTCACTTCC
GTGAGCCCGAGGAGCTTCTTCTAAGCTGCCACGTCTGCAGATCACAGTGGGTACACTCGT
ACTGCCTTGATCCTCCGCTGACTCCTTGGACATGCATGCACTGCAGAGACCTGCGTATGC
TGTTTCACCGGTATCGTTAGCCCCAGTTATGGTACTCATGTCAAACCTTAATTGTTGGAG
GAAATTGTATCAGAAGGCATGAAC