Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d050266_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:77360985:77363033:1 gene:Zm00001d050266 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cleavage and polyadenylation specificity factor 5

Sequence

ATGGGGCTCGAGATGGTGGAGGTCATGTCCGAGACTGTTCCTACGGTTGTGCCTGCGGCA
GCGAGGGAGAACGGGGTGGATATTTACCCGCTCAGCCGCTACTACTTCGGCGCCAGGGAC
GCCGCCGGCGTGCCCCGCGGCCTCGAGACCGCCGCTGACCGCGCGCTACGGCTCAAGGCA
AACTTCGCGGCGCACGGGCTCCGCACGAGCGTCCACGGCGTCCTCCTGGTGGAGCTGTTC
GATCACCCGCACGTGCTGCTGCTGCAGGTCCGGAACTCCTCCTTCCTGCTCCCGGGAGGC
CGCCTCAGGCCTGGCGAGGAAGAGGTCCGAGGGCTCAAGCGCAAGCTCTCCAGCAAGCTC
TCCGTTGTCGATGATGTGGAGGCCGTTGAAGAAGAAGACTGGCAGATTGGGCAGTGCATC
GGGATGTGGTGGAGATCTGAATTTGAGGCCATCCCGTTTCCCTACATGCCTCCACGATTC
CGTGCGGCAAAGGAATGCATGAAGCTGTTCCTGATCAGGCTGCCGATGTCCCGGCAGTTC
ATCGTGCCCAGGAACATGAAGCTCCTGGCCGTGCCTTTGTCCCAGATTCATGGCAATGCT
CAGGTTTACGGTCCAATTATAGCCGCCATTCCGAGCCTACTATCCAAGTTCTCCTTCAAC
GTCATCAGCGACTGA

Peptide Sequence

PEP ID

Zm00001d050266_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:77360985:77363033:1 gene:Zm00001d050266 transcript:Zm00001d050266_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cleavage and polyadenylation specificity factor 5

Sequence

MGLEMVEVMSETVPTVVPAAARENGVDIYPLSRYYFGARDAAGVPRGLETAADRALRLKA
NFAAHGLRTSVHGVLLVELFDHPHVLLLQVRNSSFLLPGGRLRPGEEEVRGLKRKLSSKL
SVVDDVEAVEEEDWQIGQCIGMWWRSEFEAIPFPYMPPRFRAAKECMKLFLIRLPMSRQF
IVPRNMKLLAVPLSQIHGNAQVYGPIIAAIPSLLSKFSFNVISD

Transcript Sequence

Transcript ID

Zm00001d050266_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:77360985:77363033:1 gene:Zm00001d050266 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cleavage and polyadenylation specificity factor 5

Sequence

ATCGCTCTCCCCCTGAACCCCCAACACTACTCCACAAGACCACAACCCCGAACCCGGCCG
GCGGCAGCACAACATGAGAACAGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTCTCGC
GCCTCCTACCTCTCTCCAGTCGGTTCCCACGCCTTGCCGCGCTTTACCTCTGCGGCGCAC
TCCCGTTATCATATAACCCGCGCGCCGGCTCCGGCGAGATTCGACCAAACTCCATGGGGC
TCGAGATGGTGGAGGTCATGTCCGAGACTGTTCCTACGGTTGTGCCTGCGGCAGCGAGGG
AGAACGGGGTGGATATTTACCCGCTCAGCCGCTACTACTTCGGCGCCAGGGACGCCGCCG
GCGTGCCCCGCGGCCTCGAGACCGCCGCTGACCGCGCGCTACGGCTCAAGGCAAACTTCG
CGGCGCACGGGCTCCGCACGAGCGTCCACGGCGTCCTCCTGGTGGAGCTGTTCGATCACC
CGCACGTGCTGCTGCTGCAGGTCCGGAACTCCTCCTTCCTGCTCCCGGGAGGCCGCCTCA
GGCCTGGCGAGGAAGAGGTCCGAGGGCTCAAGCGCAAGCTCTCCAGCAAGCTCTCCGTTG
TCGATGATGTGGAGGCCGTTGAAGAAGAAGACTGGCAGATTGGGCAGTGCATCGGGATGT
GGTGGAGATCTGAATTTGAGGCCATCCCGTTTCCCTACATGCCTCCACGATTCCGTGCGG
CAAAGGAATGCATGAAGCTGTTCCTGATCAGGCTGCCGATGTCCCGGCAGTTCATCGTGC
CCAGGAACATGAAGCTCCTGGCCGTGCCTTTGTCCCAGATTCATGGCAATGCTCAGGTTT
ACGGTCCAATTATAGCCGCCATTCCGAGCCTACTATCCAAGTTCTCCTTCAACGTCATCA
GCGACTGAATTGTGGAAACCAACCAGAATGTTGAGGGGTTAGTAGACGCATGCATACTTG
GCTAGTTGAAGTCATAGAACAGTGTGCGATACCGATGGGAGCTTGTATTGAGAAGTAGCT
CATCTGTTTTTGTTTTTTTTTTTTTTGTGTGTGCATATGTGTATAATGTATCCCCCTCCT
GGGCTCTTGCTGATAATGATATGTATGTACTGTATGTGTTTCTCGCGACCTGTGTATGAC
CGTGTGAGAAGGATTCAGTTCTGTACAATAACTCATTTTGATT