Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d050251_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:4:76390424:76395882:1 gene:Zm00001d050251 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hydroxyproline O-galactosyltransferase HPGT1
Sequence	ATGCAGATCCGGGAGGGCCCGGCGCGGCGGCAGGCGCCGTCGGCCGCGGGGGCGCTGCGG TCGCCGTTGTCCGCCATGATGCTCGCCATGTTCGCTACCATGGCCTCCTTCTACGTCGCC GGACGATTGTGGCAGGATGCTCAGAACCGAGTCTACCTCATTAAGGAGCTAGACAGACGA ACAGGCCAGGGACAATCAGCAATATCTGTGGATGATACCTTGAAGGTTGTTGCATGCAGG CAGCAAGGGAAGCGGTTGGCATCGCTTGAGATGGAGCTGGCTGCAGCAAAGCATGAAGGT TTTGTTGGCAAATATACTCCCGAGACAAATGGAACTCATTCTGGGAAAAAGCCACTGGTT GTTATTGGAATAATGACTAGCTTTGGGAGGAAAAACTACCGTGATGCTGTCAGGAAATCA TGGCTTCCGACAGGTTCAATGTTGAAGAAACTAGAAGAAGAAAAAGGCATTGTAGTACGT TTTGTTGTTGGAAGAAGTGCAAATCGAGGAGATACTTTTGATAGGGAGATCGATGACGAA AATAGGAGCACCAAGGATTTCTTGATATTGGTAAGCCTGATTGAACAATTGATTCTGCAC TACTATGTCGATGGATTCAATGATAACATTGTTTTATGTATATTCTATGCTCTTTGCTTA ATGTTGATTGAAGATTCATTTACTTTGGTGGTTCTTGTTTATCCTTATATGTGCACTGGT ATTTTAATAGTACAGTACTTTGGATTTTTTAGCATCAAAGTTTGA

Peptide Sequence

PEP ID	Zm00001d050251_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:4:76390424:76395882:1 gene:Zm00001d050251 transcript:Zm00001d050251_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hydroxyproline O-galactosyltransferase HPGT1
Sequence	MQIREGPARRQAPSAAGALRSPLSAMMLAMFATMASFYVAGRLWQDAQNRVYLIKELDRR TGQGQSAISVDDTLKVVACRQQGKRLASLEMELAAAKHEGFVGKYTPETNGTHSGKKPLV VIGIMTSFGRKNYRDAVRKSWLPTGSMLKKLEEEKGIVVRFVVGRSANRGDTFDREIDDE NRSTKDFLILVSLIEQLILHYYVDGFNDNIVLCIFYALCLMLIEDSFTLVVLVYPYMCTG ILIVQYFGFFSIKV

Transcript Sequence

Transcript ID	Zm00001d050251_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:76390424:76395882:1 gene:Zm00001d050251 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hydroxyproline O-galactosyltransferase HPGT1
Sequence	CTCGCCTTCATAGGCTTCTCCAAATTCCAAATCGTTGCTAGAGAAACCACCAAACCGGCC GGCAGCCCGGCACCTCTCACTCAGTCTCTCACCCCTTGCCACCACTCTCCCGTGGCGCCT TCTAGAAGCTTCCGGAACCAGACAACCACTGTGCGCCGAGTTTTCTGAAGGCGGCTTTGG TCTTTCGAGATCTCGTTGTCGGTGCCATGGCGGGTCAGTACTGAGTGCGCGGGCGGGAGC AGGTGAAGGTCTGCCAGCTCGAGATCCCGATGCAGATCCGGGAGGGCCCGGCGCGGCGGC AGGCGCCGTCGGCCGCGGGGGCGCTGCGGTCGCCGTTGTCCGCCATGATGCTCGCCATGT TCGCTACCATGGCCTCCTTCTACGTCGCCGGACGATTGTGGCAGGATGCTCAGAACCGAG TCTACCTCATTAAGGAGCTAGACAGACGAACAGGCCAGGGACAATCAGCAATATCTGTGG ATGATACCTTGAAGGTTGTTGCATGCAGGCAGCAAGGGAAGCGGTTGGCATCGCTTGAGA TGGAGCTGGCTGCAGCAAAGCATGAAGGTTTTGTTGGCAAATATACTCCCGAGACAAATG GAACTCATTCTGGGAAAAAGCCACTGGTTGTTATTGGAATAATGACTAGCTTTGGGAGGA AAAACTACCGTGATGCTGTCAGGAAATCATGGCTTCCGACAGGTTCAATGTTGAAGAAAC TAGAAGAAGAAAAAGGCATTGTAGTACGTTTTGTTGTTGGAAGAAGTGCAAATCGAGGAG ATACTTTTGATAGGGAGATCGATGACGAAAATAGGAGCACCAAGGATTTCTTGATATTGG TAAGCCTGATTGAACAATTGATTCTGCACTACTATGTCGATGGATTCAATGATAACATTG TTTTATGTATATTCTATGCTCTTTGCTTAATGTTGATTGAAGATTCATTTACTTTGGTGG TTCTTGTTTATCCTTATATGTGCACTGGTATTTTAATAGTACAGTACTTTGGATTTTTTA GCATCAAAGTTTGATATAACTAACGAAGATGCGCAGCTCTCCTGCATATTCCAGAAAAAA GTTTGATATAACTAACAAAAAGGTGTTACGATGGACATTGCCATTAATATAAACTCTTAC TCGTATTTTAGCTCATGCTGTTGATTTAGTTTCGGAACTTGACTATTAAGTGGCATTGCA GGATGATCATATAGAGTCAGATGAAGAGCTTCCTAAGAAGACAAAAAGTTTCTTTGCTAA TGCAGCAAATACATTCGATGCTGCATTTTATGCTAAGGTCAATGATGATATATACATAAA CGTTGGTATGTGCCATCTGTTAAATTTGATGGGTTTTATGAGTGGTTTGAGTTGTATTAA AATTTAGGATCTTTGCTACTAATGTTCCAGGTACTTTTTGTATCTGGGTATGATTCCTAA ATTTTGACTTTGGCTGTTAATGTTTACCAGATATGCCAGTGAAATCATTTAAACTAATTT TCAGCAGTAGGTGCCACAGTTTGAAAAACATCCAATAATTTAGATTGTTTTTTAAAACAT CATGAAAACTGAACAAGATTAATTCTGGACAATCATTTGTCAATTTTGGAAATATAAGTT CCTACCTTTTTCAAGTCAGGAGGCTTTGAAATTCTGCTTGTGCACTGAAATGAGATTTAC AAAAGGTTATTGCCATTTTCTGTCTCTGCTGCAACAACTTTAATTACCTATGATACCTCT ACATGAAAAAGTAATGATCATTAACCTTTTGAACGCCTCTGACTTGTTAAAATGCTCATT CTGCATGTTCTGGAATGCTGGATTGCCTCTGGCAACAATTGCTTGTAGTCTTGTGTTTGT GTAGATGTGGTTTCGAAATGTTAACAGGAACTGTACTTAACATCAAACAACATATTGTGT TTCTGCAGACACTTTAAGTGCAATGCTCGAAACTCACTGGGACAAGCCCCGTGTATATAT AGGTTGCATGAAATCGGGCGAGGTTTTCTCTGACTCGTGAGTGTTTAGAACAATTCATTT TAGGAACTTGATAGTTTTCTTTTCCCGTTTGAATGCTTCTTCGTTTGACAAACTAAACTA GAGATCCATTGGAAACAGAACCCACAAGTGGTATGAACCAGACTGGTGGAAATTTGGTGA TGGGAAATCGTACTTCCGGCACGCTTCTAGTGAAATGTTTGTCATATCAAGGGCCATTGC TCAGTTCATTTCTATAAACAAGTCTGTTCTCCGGACATATGCCCATGATGATGTTAGTGT AGGATCGTGGATGATTGGCCTTGCTGTGAAGCATGTAAATGAAGCAAAGCTGTGCTGTTC ATCGTGGCCCTCAGGTGCAATGTGTTCAGCGCTATAACGAGCAACAATGCATGCTGAGGA GTTTTGCAAACATCGTGCCTGGTGGATAATACATGCAATATGAGGTCGAATACCTGAGGA AATTTTGTTTTCTTCTGCCATTTTCTGTAACGTCTTTTGGAGGAAGCTTTTGCGAGCCAG TTCATACCGAATCAGATATCTTGTTTTTTTTCTTTGCAAGGCCACTACACTAGAATCGTG GCTTCTAACAAAAAGCCTTCTGCAGATTTTATCCTGTTCCGTGTGCCATTTGTAGATGCC CCACCCTTACCATTCTTTTTCTGACAGACACTACCATTGTTGGAGTGACAGAAATCAATA GCAATT