Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d050241_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:75536877:75538808:1 gene:Zm00001d050241 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BURP domain-containing protein-RD22-like8 description:Polygalacturonase 1 beta-like protein 3
Sequence	ATGGCTTCTTCCCCTCCCCAGCCACTCACCCGCACCGTCCTCGCCGCTACCCTGCTCCTC CTCTTGCACAATGCCGCCGCCAGAGCCGACGGCGCGTCGCCGGCGGTGAACCCATTCACG GCGAAGGCGGCATTCATCCGATACTGGAACCGCAAGGTGCCCAACAACCGCCCGCACCCG GCCTTCTTCGTCGCCAAACTCTCCCCGCTCCCGGCCGCTGACTCCGCCTCCTTCCCATCC GCGCTGCCCGACATCCGCGCCAGCCTACCCGCGCTCTGCACCAAAGCCGCGCTCCTCTGC CCCGGGCCGGCTACTACTGATGCGGCGTCGCTGACATCGGGCCGCAGGGGCGGGGGACCT TTCAAGGGCTACAACAACGCCAACTTCTCCAACTACGGCACCGGCGGCGTAGCGGGGACC GACTCGTTCCAGAAGTACTCCCCGGACCTCAACATCGCCGCCGACAGCTTCCGCCGCTAC GGCCGGGACTCGTCGGGACGCGCCGACAGCTTCACCTCTTACGAGGCCGACGGCAACGTC GTGACCGCCAACTTCACCTCCTACGCCGGCGGCGCCACGGGTGGTTCGGGCTCCTTCGCC GCCTACGCCGCCGAGACCAACGTCCCGGACTCCACCTTCACCAACTACGACGCCGCCGCC AACGGCCGCGGCCGGAGCTTCGCGTCCTACTCCCAGGAGGCGAACCATGGGGAGAACGGC TTCTCCGGCTACGGCAAGAACGGCAACGGCGTGCGCGAGACGTTCAAGTCCTACGGCAAT GAGTCCAACGTGCTGGCCTCCGGCTTCGCCAACTACGGGCAGTCCGCCAACGGCGCCACG GACACCTTCACGGGCTACGGCGTGGAGGGGAACGTCCCTGAGAACAGGTTCCGGAGCTAC GGCGCCGGCGGCAACGCTGGCGTCGACACCTTCAAGAATTACCGCGACGACGGCAACGTC GGCGACGACAGGTTCACCTCCTACGCCAAGGGCGCAAACGGCGGCGCGGCGGAGTTCCAG AGCTACGGCAACTCGGCCAACCCGGGCAGCACCATCTTCAAGGGCTACGGCGAGGGCACC AACCCCAACCACCACATTGGGTTCAAGGAGTACGCCGGCGAGAACAACACCTTCAAGGGC TATGCCAAGAGCGGTGTGGACTTCAAGGGGTACCACAACACCACCGTCTCCAGCTCCACC GCCGCGGTGCTGACGGTGTCGGCGGAGGCAGCGGCATCGATGCATCACGAGCACCTGAAG TGGTCGCCGGAGCCCGGGAAGTTCTTCAGGGAGCGGGAGCTCGTGGCCGGGAACCGAATG CCGATGCCGGACATCAGGGACAAGATGCCGCCCAGGGCGTTCCTGCCCAGGGCCATCGCC GCGAGGATACCGTTCGAGCCCAACGCCGTGTCGGAGGCCTTCGGGCTGCCCCTCGACACG GCGCTGGGGAAGGCCGTGGCGTCCACGGTGGCGGAGTGCGAGCGCGCGCCGAGCAAGGGC GAGACGAAGCGGTGCGCGACGTCGGCCGAGGACGTGGTGGACTTCGCGGTGGAGGTGCTG GGCGACGACATCGTGGTGCGCAGCACGGCGTCCACGGCGGGCGGCGGCGGGCGCGTCCAG CTGGGCGCCGTGGCCGGCGTGGACGGCGGCAGGGTGACGCGGTCCGTGTCGTGCCACCAG AGCCTGTTCCCGTACCTGGTGTACTACTGCCACTCCGTGCCCAAGGTGCGGGTGTACGAG GCCGACATCCTGGCCGCCGATGGCTCCGGCTCCGGCGAGAAGATCAACCGCGGGGTGGCC ATCTGCCACCTGGACACGTCCGACTGGAGCCCGGCGCACGGCGCGTTCGTGGCGCTCGGC GGCAAGCCCGGCGAGGTGGAGGTGTGCCACTGGATCTTCGAGGGCGACATGACGTGGACA GTCGCGGACTGA

Peptide Sequence

PEP ID	Zm00001d050241_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:75536877:75538808:1 gene:Zm00001d050241 transcript:Zm00001d050241_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BURP domain-containing protein-RD22-like8 description:Polygalacturonase 1 beta-like protein 3
Sequence	MASSPPQPLTRTVLAATLLLLLHNAAARADGASPAVNPFTAKAAFIRYWNRKVPNNRPHP AFFVAKLSPLPAADSASFPSALPDIRASLPALCTKAALLCPGPATTDAASLTSGRRGGGP FKGYNNANFSNYGTGGVAGTDSFQKYSPDLNIAADSFRRYGRDSSGRADSFTSYEADGNV VTANFTSYAGGATGGSGSFAAYAAETNVPDSTFTNYDAAANGRGRSFASYSQEANHGENG FSGYGKNGNGVRETFKSYGNESNVLASGFANYGQSANGATDTFTGYGVEGNVPENRFRSY GAGGNAGVDTFKNYRDDGNVGDDRFTSYAKGANGGAAEFQSYGNSANPGSTIFKGYGEGT NPNHHIGFKEYAGENNTFKGYAKSGVDFKGYHNTTVSSSTAAVLTVSAEAAASMHHEHLK WSPEPGKFFRERELVAGNRMPMPDIRDKMPPRAFLPRAIAARIPFEPNAVSEAFGLPLDT ALGKAVASTVAECERAPSKGETKRCATSAEDVVDFAVEVLGDDIVVRSTASTAGGGGRVQ LGAVAGVDGGRVTRSVSCHQSLFPYLVYYCHSVPKVRVYEADILAADGSGSGEKINRGVA ICHLDTSDWSPAHGAFVALGGKPGEVEVCHWIFEGDMTWTVAD

Transcript Sequence

Transcript ID	Zm00001d050241_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:75536877:75538808:1 gene:Zm00001d050241 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BURP domain-containing protein-RD22-like8 description:Polygalacturonase 1 beta-like protein 3
Sequence	ATGGCTTCTTCCCCTCCCCAGCCACTCACCCGCACCGTCCTCGCCGCTACCCTGCTCCTC CTCTTGCACAATGCCGCCGCCAGAGCCGACGGCGCGTCGCCGGCGGTGAACCCATTCACG GCGAAGGCGGCATTCATCCGATACTGGAACCGCAAGGTGCCCAACAACCGCCCGCACCCG GCCTTCTTCGTCGCCAAACTCTCCCCGCTCCCGGCCGCTGACTCCGCCTCCTTCCCATCC GCGCTGCCCGACATCCGCGCCAGCCTACCCGCGCTCTGCACCAAAGCCGCGCTCCTCTGC CCCGGGCCGGCTACTACTGATGCGGCGTCGCTGACATCGGGCCGCAGGGGCGGGGGACCT TTCAAGGGCTACAACAACGCCAACTTCTCCAACTACGGCACCGGCGGCGTAGCGGGGACC GACTCGTTCCAGAAGTACTCCCCGGACCTCAACATCGCCGCCGACAGCTTCCGCCGCTAC GGCCGGGACTCGTCGGGACGCGCCGACAGCTTCACCTCTTACGAGGCCGACGGCAACGTC GTGACCGCCAACTTCACCTCCTACGCCGGCGGCGCCACGGGTGGTTCGGGCTCCTTCGCC GCCTACGCCGCCGAGACCAACGTCCCGGACTCCACCTTCACCAACTACGACGCCGCCGCC AACGGCCGCGGCCGGAGCTTCGCGTCCTACTCCCAGGAGGCGAACCATGGGGAGAACGGC TTCTCCGGCTACGGCAAGAACGGCAACGGCGTGCGCGAGACGTTCAAGTCCTACGGCAAT GAGTCCAACGTGCTGGCCTCCGGCTTCGCCAACTACGGGCAGTCCGCCAACGGCGCCACG GACACCTTCACGGGCTACGGCGTGGAGGGGAACGTCCCTGAGAACAGGTTCCGGAGCTAC GGCGCCGGCGGCAACGCTGGCGTCGACACCTTCAAGAATTACCGCGACGACGGCAACGTC GGCGACGACAGGTTCACCTCCTACGCCAAGGGCGCAAACGGCGGCGCGGCGGAGTTCCAG AGCTACGGCAACTCGGCCAACCCGGGCAGCACCATCTTCAAGGGCTACGGCGAGGGCACC AACCCCAACCACCACATTGGGTTCAAGGAGTACGCCGGCGAGAACAACACCTTCAAGGGC TATGCCAAGAGCGGTGTGGACTTCAAGGGGTACCACAACACCACCGTCTCCAGCTCCACC GCCGCGGTGCTGACGGTGTCGGCGGAGGCAGCGGCATCGATGCATCACGAGCACCTGAAG TGGTCGCCGGAGCCCGGGAAGTTCTTCAGGGAGCGGGAGCTCGTGGCCGGGAACCGAATG CCGATGCCGGACATCAGGGACAAGATGCCGCCCAGGGCGTTCCTGCCCAGGGCCATCGCC GCGAGGATACCGTTCGAGCCCAACGCCGTGTCGGAGGCCTTCGGGCTGCCCCTCGACACG GCGCTGGGGAAGGCCGTGGCGTCCACGGTGGCGGAGTGCGAGCGCGCGCCGAGCAAGGGC GAGACGAAGCGGTGCGCGACGTCGGCCGAGGACGTGGTGGACTTCGCGGTGGAGGTGCTG GGCGACGACATCGTGGTGCGCAGCACGGCGTCCACGGCGGGCGGCGGCGGGCGCGTCCAG CTGGGCGCCGTGGCCGGCGTGGACGGCGGCAGGGTGACGCGGTCCGTGTCGTGCCACCAG AGCCTGTTCCCGTACCTGGTGTACTACTGCCACTCCGTGCCCAAGGTGCGGGTGTACGAG GCCGACATCCTGGCCGCCGATGGCTCCGGCTCCGGCGAGAAGATCAACCGCGGGGTGGCC ATCTGCCACCTGGACACGTCCGACTGGAGCCCGGCGCACGGCGCGTTCGTGGCGCTCGGC GGCAAGCCCGGCGAGGTGGAGGTGTGCCACTGGATCTTCGAGGGCGACATGACGTGGACA GTCGCGGACTGA