Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d050218_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:74240150:74245597:1 gene:Zm00001d050218 gene_biotype:protein_coding transcript_biotype:protein_coding description:NADPH--cytochrome P450 reductase

Sequence

ATGGACTCGGCGACGTCGGGGGCGATGGAGCTGGTGGCCGCGCTGCTGCGCGGCCGGGTG
CCGCCCGAGCTGGGCGGGGACGGCGCCGAGGGCCGGGCGCTCGTCGCCACGCTCGCCGCC
GCGGTGCTCGGCGCCGCGCTCTTCGTGCTCTGGAGGCGCGCCGCCGCCGGGAAGAAGCGG
AAGCGGGAGGCCGCCGTCGCGGCCGCGGAGGCCACGCAGGCCAAGGCGAGAGGCGGTAAG
GCCGCCGAGGAGGAGAAGCCGGCCGACGACGGCAGGAAAAAGGTCACCGTCTTCTTCGGC
ACGCAGACCGGCACCTCCGAGGGGTTTGCCAAGGCCCTTGCTGAGGAGGCGAAGTCCAGA
TATGACAAGGCAAGCTTCAAAGTCGTGGACTTGGATGATTATGCAGCAGAGGACGAGGAA
TATGAGAAGTTGAAGAAGGAGAAGCTAGCGTTGTTCTTCGTGGCAACGTATGGAGATGGT
GAGCCGACTGACAATGCTGCTAGGTTCTACAAATGGTTCACTGAGGGAAATGAGAGGGGT
GTCTGGCTAAATGACTTTGAGTATGCTGTGTTTGGTCTGGGCAACCGACAGTATGAGCAT
TTCAACAAGGTTGCCAAGGTAGTCGATGAGATCCTGACAGAACAAGGTGGAAAGCGCCTT
GTTCCAGTTGGTCTTGGGGACGATGACCAATGCATTGAGGATGACTTCAATGCATGGAAA
GAAGCTCTCTGGCCAGAGTTGGATAGATTACTTCGGGATGAAAATGATGCCTCTCCAGGC
CCTACATACACAGCTGCAATTCCTGAATACCGGGTTGAATTCATCAAACCTGAGGAGGCA
GCTCATTTGGAGAGAAACTTCAGCCTTGCAAATGGCCATGCAGTCCATGATGCCCAGCAT
CCTTGCCAGGCTAATGTGGTCGTGCGGCAGGAACTCCACACCCCTGCTTCTGATCGTTCA
TGCACTCATTTGGAGTTCGACATTGCTGCAACTGGTCTCACGTATGAAACTGGCGACCAT
GTTGGTGTATACACCGAGAACTGCCCTGAGGTTGTAGAGGAGGCAGAGAGGTTGTTGGGC
TACTCGCCAGACACATTTTTCACCATCCATGCAGACAAAGAGGATGACACTTCACTAAGT
GGCAGTTCTCTTGCTCCTCCGTTCCCCTCCCCAATCACAGTGAGGAATGCACTTGCTAGA
TATGCCGACCTTCTAAATTCACCGAAGAAGGCTTCTCTGGTTGCATTAGCTTCTTATGCT
TCAGATCCTGCTGAGGCTGATCGTCTGAGGTTCTTGGCCTCTGCTGCTGGCAAGGATGAG
TATGCCCAATGGGTTGTGGCAAGTCAGAGAAGCCTGTTGGAAGTCATGGCAGAGTTCCCT
TCGGCAAAGCCTCCACTAGGAGTCTTCTTTGCAGCTGTTGCCCCTCGACTTCAACCAAGA
TATTATTCTATTTCATCTTCACCTAGTATGGCACCAACCAGGATTCATGTCACATGTGCG
CTCGTGCGCGAAACAACACCCGCTGGAAGGGTACATAAGGGAGTTTGCTCAACTTGGATT
AAGAATGCTGTTCCTTCGGAGGAGAGCAAGGAATGCAGCTGGGCTCCGATATTTGTGAGG
CAATCAAACTTCAAACTACCCGCTGATCCTTCAGTACCGATTATCATGATTGGCCCTGGG
ACCGGTCTTGCACCCTTCCGTGGCTTCTTGCAGGAAAGACTTGCTCAAAAAGAATCTGGA
GCTGAGCTTGGTCGATCTGTGTTCTTCTTTGGATGCAGAAACAGCAAGATGGACTTCATC
TATGAGGGCGAGCTGAACAATTTCGTTGAGCAAGGAGCACTGTCTGAGCTGGTTCTTGCC
TTCTCGCGCCAGGGCCTTGCTAAGGAATATGTGCAGCACAAAATGGCACAGAAAGCATCT
GAAATCTGGGACATGATCTCCCAAGGTGCTTACATCTATGTCTGTGGTGACGCCAAAGGC
ATGGCCAGAGACGTACATAGAGTTCTCCATACCATTGTTCAGGAGCAGGGCTCCCTCGAC
AGTTCTAAGGCCGAGAGCTTCGTGAAGAATCTCCAAATGGAGGGCAGATATCTGAGGGAT
GTGTGGTAA

Peptide Sequence

PEP ID

Zm00001d050218_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:74240150:74245597:1 gene:Zm00001d050218 transcript:Zm00001d050218_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:NADPH--cytochrome P450 reductase

Sequence

MDSATSGAMELVAALLRGRVPPELGGDGAEGRALVATLAAAVLGAALFVLWRRAAAGKKR
KREAAVAAAEATQAKARGGKAAEEEKPADDGRKKVTVFFGTQTGTSEGFAKALAEEAKSR
YDKASFKVVDLDDYAAEDEEYEKLKKEKLALFFVATYGDGEPTDNAARFYKWFTEGNERG
VWLNDFEYAVFGLGNRQYEHFNKVAKVVDEILTEQGGKRLVPVGLGDDDQCIEDDFNAWK
EALWPELDRLLRDENDASPGPTYTAAIPEYRVEFIKPEEAAHLERNFSLANGHAVHDAQH
PCQANVVVRQELHTPASDRSCTHLEFDIAATGLTYETGDHVGVYTENCPEVVEEAERLLG
YSPDTFFTIHADKEDDTSLSGSSLAPPFPSPITVRNALARYADLLNSPKKASLVALASYA
SDPAEADRLRFLASAAGKDEYAQWVVASQRSLLEVMAEFPSAKPPLGVFFAAVAPRLQPR
YYSISSSPSMAPTRIHVTCALVRETTPAGRVHKGVCSTWIKNAVPSEESKECSWAPIFVR
QSNFKLPADPSVPIIMIGPGTGLAPFRGFLQERLAQKESGAELGRSVFFFGCRNSKMDFI
YEGELNNFVEQGALSELVLAFSRQGLAKEYVQHKMAQKASEIWDMISQGAYIYVCGDAKG
MARDVHRVLHTIVQEQGSLDSSKAESFVKNLQMEGRYLRDVW

Transcript Sequence

Transcript ID

Zm00001d050218_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:74240150:74245597:1 gene:Zm00001d050218 gene_biotype:protein_coding transcript_biotype:protein_coding description:NADPH--cytochrome P450 reductase

Sequence

AGCAGCGTTGCATCAGCTGTTGTAATTACGTGGTACAGGACAGTGCCCATTTGCCGTTGC
CGCGTCCAGCATTCATTCATTCATTGCCCTGGCCTTCTTCCTTCGGGCCTTCCCGTGCCG
TCGCCCAACGCCTCACCTACCACCACCGCCCGCCACCAAACCAAACCAACCCCTCGGTCG
CCGACGCCGAGTGACGTAAACGATGGACTCGGCGACGTCGGGGGCGATGGAGCTGGTGGC
CGCGCTGCTGCGCGGCCGGGTGCCGCCCGAGCTGGGCGGGGACGGCGCCGAGGGCCGGGC
GCTCGTCGCCACGCTCGCCGCCGCGGTGCTCGGCGCCGCGCTCTTCGTGCTCTGGAGGCG
CGCCGCCGCCGGGAAGAAGCGGAAGCGGGAGGCCGCCGTCGCGGCCGCGGAGGCCACGCA
GGCCAAGGCGAGAGGCGGTAAGGCCGCCGAGGAGGAGAAGCCGGCCGACGACGGCAGGAA
AAAGGTCACCGTCTTCTTCGGCACGCAGACCGGCACCTCCGAGGGGTTTGCCAAGGCCCT
TGCTGAGGAGGCGAAGTCCAGATATGACAAGGCAAGCTTCAAAGTCGTGGACTTGGATGA
TTATGCAGCAGAGGACGAGGAATATGAGAAGTTGAAGAAGGAGAAGCTAGCGTTGTTCTT
CGTGGCAACGTATGGAGATGGTGAGCCGACTGACAATGCTGCTAGGTTCTACAAATGGTT
CACTGAGGGAAATGAGAGGGGTGTCTGGCTAAATGACTTTGAGTATGCTGTGTTTGGTCT
GGGCAACCGACAGTATGAGCATTTCAACAAGGTTGCCAAGGTAGTCGATGAGATCCTGAC
AGAACAAGGTGGAAAGCGCCTTGTTCCAGTTGGTCTTGGGGACGATGACCAATGCATTGA
GGATGACTTCAATGCATGGAAAGAAGCTCTCTGGCCAGAGTTGGATAGATTACTTCGGGA
TGAAAATGATGCCTCTCCAGGCCCTACATACACAGCTGCAATTCCTGAATACCGGGTTGA
ATTCATCAAACCTGAGGAGGCAGCTCATTTGGAGAGAAACTTCAGCCTTGCAAATGGCCA
TGCAGTCCATGATGCCCAGCATCCTTGCCAGGCTAATGTGGTCGTGCGGCAGGAACTCCA
CACCCCTGCTTCTGATCGTTCATGCACTCATTTGGAGTTCGACATTGCTGCAACTGGTCT
CACGTATGAAACTGGCGACCATGTTGGTGTATACACCGAGAACTGCCCTGAGGTTGTAGA
GGAGGCAGAGAGGTTGTTGGGCTACTCGCCAGACACATTTTTCACCATCCATGCAGACAA
AGAGGATGACACTTCACTAAGTGGCAGTTCTCTTGCTCCTCCGTTCCCCTCCCCAATCAC
AGTGAGGAATGCACTTGCTAGATATGCCGACCTTCTAAATTCACCGAAGAAGGCTTCTCT
GGTTGCATTAGCTTCTTATGCTTCAGATCCTGCTGAGGCTGATCGTCTGAGGTTCTTGGC
CTCTGCTGCTGGCAAGGATGAGTATGCCCAATGGGTTGTGGCAAGTCAGAGAAGCCTGTT
GGAAGTCATGGCAGAGTTCCCTTCGGCAAAGCCTCCACTAGGAGTCTTCTTTGCAGCTGT
TGCCCCTCGACTTCAACCAAGATATTATTCTATTTCATCTTCACCTAGTATGGCACCAAC
CAGGATTCATGTCACATGTGCGCTCGTGCGCGAAACAACACCCGCTGGAAGGGTACATAA
GGGAGTTTGCTCAACTTGGATTAAGAATGCTGTTCCTTCGGAGGAGAGCAAGGAATGCAG
CTGGGCTCCGATATTTGTGAGGCAATCAAACTTCAAACTACCCGCTGATCCTTCAGTACC
GATTATCATGATTGGCCCTGGGACCGGTCTTGCACCCTTCCGTGGCTTCTTGCAGGAAAG
ACTTGCTCAAAAAGAATCTGGAGCTGAGCTTGGTCGATCTGTGTTCTTCTTTGGATGCAG
AAACAGCAAGATGGACTTCATCTATGAGGGCGAGCTGAACAATTTCGTTGAGCAAGGAGC
ACTGTCTGAGCTGGTTCTTGCCTTCTCGCGCCAGGGCCTTGCTAAGGAATATGTGCAGCA
CAAAATGGCACAGAAAGCATCTGAAATCTGGGACATGATCTCCCAAGGTGCTTACATCTA
TGTCTGTGGTGACGCCAAAGGCATGGCCAGAGACGTACATAGAGTTCTCCATACCATTGT
TCAGGAGCAGGGCTCCCTCGACAGTTCTAAGGCCGAGAGCTTCGTGAAGAATCTCCAAAT
GGAGGGCAGATATCTGAGGGATGTGTGGTAAAGAGCGATTGGATGAACATTCGTTCGTAT
TACACACGTGTACAACTACTACCGGAAGAGCACTGACAATGGACTAGATCTGATATTTTT
ATTGCTTCTATATTTATTTTTATTTTCTTTTGCTTCGTTCTCTTCAAGAGCTCTTTGCTT
TCTTTGCGGTTCTCCCAAGAGTTCTTTGTACCTATGTATTACAAATTCTTTATATGTATA
AGATGAGGACAATTTTGGCAATAAGCCTGTCACGATGTTATTAGTATTGCCAAATAGGCT
TTCGTGTGATTATGCATAATGTATAAATGAATCCACAAAGAGTTTAGGA