Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d050178_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:71005585:71008083:1 gene:Zm00001d050178 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic aspartyl protease family protein
Sequence	ATGCTCGTACAGGCAGCGAGTAGCTACTGGCAGGCAGCAGCGGCTCCTCGTCCGTCTATA TATCCGTGTCTCTCTCACGCGCACCACTCACATTCTCTTGTCTCTTGCACATCCCCCGCT TCCTTCTTGGTCGTTTCTCCCCTTCTGATCCGTGCTAGCCAGCTTGCGTTGTGGCTGCTT GTCGCCAGATCTACCTATCCACCGTACCACAGTCGTCCACAGCGCGCGCTTACGATGGCG GTCGCCGCCGCTCGCCTTCTTCTTCGCGTCGTCGTCCTCGCGCTCCTCGCAGCCGCGCAG CAGGTCGTCGGGAAGAGCGCCGTGCTGTCTCTGCGGGAGTTGGATGGACGACGACGGAGT GCCGCGACGACGGATACCCGGAGCAGCCGCTACTACGTCGACGCAATGCTTGCTGAAACG CTAGGGGAGCACAAGAAAGCTGGGGCAGCAACAAGCGTGCTAGAGCTCAAGCGCCACTCC CTCACTGCCATCCCTGAAGACCCCGTCGCCCGCGACCGCTACCTCCGCCGTCTCCTCGCA GCCGACGAGTCGCGCGCCAACTCATTCCAGCCCCGCCGTAACAAGGACAGGGCATCAGCG TCCACGCAGTCCGCCTCGGCAGAGGTCCCGCTGACCTCGGGCATCCGGCTCCAGACGCTC AACTACGTCACCACCATCTCTCTCGGCGGCAGCTCCGGCTCGCCCGCCGCGAACCTCACC GTCATCGTGGACACGGGGAGCGACCTCACCTGGGTGCAGTGCAAGCCCTGCAGCGCGTGC TACGCTCAGCGCGACCCTCTCTTCGACCCCGCGGGCTCCGCCACCTACGCCGCGGTCCGG TGCAACGCCTCCGCGTGCGCGGACTCCCTCAGGGCCGCCACCGGCACGCCGGGATCCTGC GGTTCGACGGGGGCAGGCAGCGAGAAGTGCTACTACGCGTTAGCCTACGGCGACGGGTCG TTCAGCCGCGGCGTGCTGGCCACGGACACGGTCGCGCTCGGCGGCGCCAGCCTGGGCGGG TTCGTGTTCGGGTGCGGGCTCAGCAACCGCGGCCTGTTCGGCGGCACGGCGGGGCTCATG GGGCTCGGCCGCACCGAGCTCTCGCTGGTGTCCCAGACCGCGTCCCGGTACGGCGGCGTG TTCTCCTACTGCCTGCCGGCGGCCACCTCCGGCGACGCCTCAGGCTCGCTCTCCCTCGGC GGCGGGGACGACGCGGCGTCGTCCTACCGCAACACGACGCCCGTGGCGTACACCCGCATG ATCGCCGACCCGGCGCAGCCGCCCTTCTACTTCCTCAACGTCACCGGCGCGGCCGTCGGC GGCACCGCCCTCGCGGCACAGGGGCTGGGCGCCAGCAACGTGCTCATCGACTCCGGCACG GTGATCACGCGCCTGGCGCCGTCCGTGTACCGCGCCGTGCGCGCCGAGTTCATGCGCCAG TTCGGCGCCGCGGGCTACCCGGCCGCCCCGGGGTTCTCGATCCTGGACACGTGCTACGAC CTGACGGGGCACGACGAGGTGAAGGTGCCGCTGCTGACGCTGCGGCTGGAGGGCGGGGCG GACGTCACCGTGGACGCGGCTGGGATGCTGTTCGTCGTGAGGAAGGACGGCTCGCAGGTG TGCCTGGCCATGGCGAGTCTGTCGTACGAGGACGAGACGCCTATCATTGGCAACTACCAG CAGAAGAACAAGAGGGTGGTGTATGACACGCTGGGGTCCAGGCTAGGCTTCGCTGACGAG GACTGCAACTATGTATAG

Peptide Sequence

PEP ID	Zm00001d050178_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:71005585:71008083:1 gene:Zm00001d050178 transcript:Zm00001d050178_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic aspartyl protease family protein
Sequence	MLVQAASSYWQAAAAPRPSIYPCLSHAHHSHSLVSCTSPASFLVVSPLLIRASQLALWLL VARSTYPPYHSRPQRALTMAVAAARLLLRVVVLALLAAAQQVVGKSAVLSLRELDGRRRS AATTDTRSSRYYVDAMLAETLGEHKKAGAATSVLELKRHSLTAIPEDPVARDRYLRRLLA ADESRANSFQPRRNKDRASASTQSASAEVPLTSGIRLQTLNYVTTISLGGSSGSPAANLT VIVDTGSDLTWVQCKPCSACYAQRDPLFDPAGSATYAAVRCNASACADSLRAATGTPGSC GSTGAGSEKCYYALAYGDGSFSRGVLATDTVALGGASLGGFVFGCGLSNRGLFGGTAGLM GLGRTELSLVSQTASRYGGVFSYCLPAATSGDASGSLSLGGGDDAASSYRNTTPVAYTRM IADPAQPPFYFLNVTGAAVGGTALAAQGLGASNVLIDSGTVITRLAPSVYRAVRAEFMRQ FGAAGYPAAPGFSILDTCYDLTGHDEVKVPLLTLRLEGGADVTVDAAGMLFVVRKDGSQV CLAMASLSYEDETPIIGNYQQKNKRVVYDTLGSRLGFADEDCNYV

Transcript Sequence

Transcript ID	Zm00001d050178_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:71005585:71008083:1 gene:Zm00001d050178 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic aspartyl protease family protein
Sequence	ACAGCATGCCCTTTTTGACATTCACCCTGCCGCCAGCTTCCAGCAGCCGGCGTCCTCTCA AGTCTCAACTCCCAAGGCTCGGCGACGTCACTCGATCGGCGTCAACAGCAGGCACCACGG CCACGCCCACGCAGACGCAGGGCAGTAACAGAAGTACACCATAGCTATGAATGGTCCACT ACCATCCGCTGTCTTCGTCCCGGTCATGCATGCATGTTCCGCGTCACGGAGCAGGTGCGG ACGGGACGGGCGCCCCTGGGGCATCGCCCACGCTGCGCTACCGTCCTCGCCGCAAGCAAA CAAGGAGCCACCACCTCCCCGGTCGCCCCCTGTGCGTGCCCGTGATCGCAGATAGTCCGC CGCGCCACAGCGGTTACAGTGCTCTCGTGGCCCCTCGTGCATCCATCCATGCTCGTACAG GCAGCGAGTAGCTACTGGCAGGCAGCAGCGGCTCCTCGTCCGTCTATATATCCGTGTCTC TCTCACGCGCACCACTCACATTCTCTTGTCTCTTGCACATCCCCCGCTTCCTTCTTGGTC GTTTCTCCCCTTCTGATCCGTGCTAGCCAGCTTGCGTTGTGGCTGCTTGTCGCCAGATCT ACCTATCCACCGTACCACAGTCGTCCACAGCGCGCGCTTACGATGGCGGTCGCCGCCGCT CGCCTTCTTCTTCGCGTCGTCGTCCTCGCGCTCCTCGCAGCCGCGCAGCAGGTCGTCGGG AAGAGCGCCGTGCTGTCTCTGCGGGAGTTGGATGGACGACGACGGAGTGCCGCGACGACG GATACCCGGAGCAGCCGCTACTACGTCGACGCAATGCTTGCTGAAACGCTAGGGGAGCAC AAGAAAGCTGGGGCAGCAACAAGCGTGCTAGAGCTCAAGCGCCACTCCCTCACTGCCATC CCTGAAGACCCCGTCGCCCGCGACCGCTACCTCCGCCGTCTCCTCGCAGCCGACGAGTCG CGCGCCAACTCATTCCAGCCCCGCCGTAACAAGGACAGGGCATCAGCGTCCACGCAGTCC GCCTCGGCAGAGGTCCCGCTGACCTCGGGCATCCGGCTCCAGACGCTCAACTACGTCACC ACCATCTCTCTCGGCGGCAGCTCCGGCTCGCCCGCCGCGAACCTCACCGTCATCGTGGAC ACGGGGAGCGACCTCACCTGGGTGCAGTGCAAGCCCTGCAGCGCGTGCTACGCTCAGCGC GACCCTCTCTTCGACCCCGCGGGCTCCGCCACCTACGCCGCGGTCCGGTGCAACGCCTCC GCGTGCGCGGACTCCCTCAGGGCCGCCACCGGCACGCCGGGATCCTGCGGTTCGACGGGG GCAGGCAGCGAGAAGTGCTACTACGCGTTAGCCTACGGCGACGGGTCGTTCAGCCGCGGC GTGCTGGCCACGGACACGGTCGCGCTCGGCGGCGCCAGCCTGGGCGGGTTCGTGTTCGGG TGCGGGCTCAGCAACCGCGGCCTGTTCGGCGGCACGGCGGGGCTCATGGGGCTCGGCCGC ACCGAGCTCTCGCTGGTGTCCCAGACCGCGTCCCGGTACGGCGGCGTGTTCTCCTACTGC CTGCCGGCGGCCACCTCCGGCGACGCCTCAGGCTCGCTCTCCCTCGGCGGCGGGGACGAC GCGGCGTCGTCCTACCGCAACACGACGCCCGTGGCGTACACCCGCATGATCGCCGACCCG GCGCAGCCGCCCTTCTACTTCCTCAACGTCACCGGCGCGGCCGTCGGCGGCACCGCCCTC GCGGCACAGGGGCTGGGCGCCAGCAACGTGCTCATCGACTCCGGCACGGTGATCACGCGC CTGGCGCCGTCCGTGTACCGCGCCGTGCGCGCCGAGTTCATGCGCCAGTTCGGCGCCGCG GGCTACCCGGCCGCCCCGGGGTTCTCGATCCTGGACACGTGCTACGACCTGACGGGGCAC GACGAGGTGAAGGTGCCGCTGCTGACGCTGCGGCTGGAGGGCGGGGCGGACGTCACCGTG GACGCGGCTGGGATGCTGTTCGTCGTGAGGAAGGACGGCTCGCAGGTGTGCCTGGCCATG GCGAGTCTGTCGTACGAGGACGAGACGCCTATCATTGGCAACTACCAGCAGAAGAACAAG AGGGTGGTGTATGACACGCTGGGGTCCAGGCTAGGCTTCGCTGACGAGGACTGCAACTAT GTATAGAGACTTGACAGGGAAGAGGATGTGGAATATCGGATTTCTAGTTATATGTTGCAT GAACTATGCCCGCCTAACTACTGAATGTAGTTTGATGATCAAATCCCATAGTTTTAATAT GACTAAAATCTTT