Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d050139_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:4:68410565:68416118:-1 gene:Zm00001d050139 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histone deacetylase description:Histone deacetylase
Sequence	ATGGCGGCTTCTGGTGAGGGCGCGTCGCTGCCGTCTCCGGCGGGCGGGGAGGATGCGCAC CGCCGCCGCGTCAGCTATTTCTACGAGCCGTCGATCGGAGACTACTACTACGGGCAAGGT CACCCGATGAAGCCCCACCGCATCCGAATGGCGCACTCGCTGGTGGTCCACTACGGCCTC CACCGCCTCCTCGAGCTCTCCCGCCCCTACCCGGCCTCTGAGGCCGACATCCGCCGCTTC CACTCCGACGACTACGTCGCTTTCCTCGCGTCCGCCACCGGAAACCCGGGTGTCCTCGAC CCGCGCGCCATTAAGCGCTTTAACGTCGGTGAGGACTGCCCCGTGTTCGACGGTCTCTTC CCCTTCTGCCAGGCCTCCGCTGGGGGAAGCATCGGCGCCGCCGTCAAGCTTAACCGCGGG GACGCCGACATCACCGTCAACTGGGCGGGCGGCCTCCACCACGCCAAGAAGAGCGAGGCC TCCGGGTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAGTTCCAC AGGCGTGTGCTATATGTAGACATTGATGTCCACCATGGAGATGGCGTGGAGGAGGCCTTC TTCACTACAAACCGAGTCATGACTGTTTCCTTTCACAAGTATGGGGATTTTTTCCCTGGT ACTGGACATATCACTGACGTTGGGGCAGCCGAAGGGAAGCATTATGCTCTGAATGTTCCC CTGAGTGATGGTATCGATGACACCACCTTTCGTGGTCTGTTTCAATGCATCATTAAGAAA GTTATGGAGGTTTATCAGCCAGACGTGGTTGTCCTCCAATGCGGAGCTGACTCTTTGGCT GGAGACAGGTTAGGTTGCTTCAACCTGTCTGTGAAGGGTCATGCTGACTGCCTCCGTTTC CTTAGGTCGTACAATGTTCCTATGATGGTTTTAGGTGGTGGAGGTTACACCATCAGAAAT GTTGCACGCTGCTGGTGCTACGAGACCGCAGTTGCTGTTGGAGTTGAACCTGATAACAAG CTGCCTTACAATGATTACTATGAGTACTTTGGCCCTGATTATACTCTTCATATCCAACCA AAAAGTGTTGAAAACCTGAATACCACAAAGGACTTGGAGAACATAAAGAACATGATATTG GAGAACCTGTCAAAGATAGAACATGTTCCCAGCACTCAATTCCATGACAGACCGTCAGAC CCTGAAGCTCCAGAGGAGAAAGAGGAGGACATGGACAAGAGGCCACCTCAGCGCAGCAGA TTATGGAGCGGAGGAGCTTACGACTCTGATACAGAGGATCCTGACAGCCTGAAAAGCGAG GGTAAAGACGTAACTGCTAACTTCCAGATGAAGGATGAACCAAAAGATGATCTGTAG

Peptide Sequence

PEP ID	Zm00001d050139_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:4:68410565:68416118:-1 gene:Zm00001d050139 transcript:Zm00001d050139_T007 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histone deacetylase description:Histone deacetylase
Sequence	MAASGEGASLPSPAGGEDAHRRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGL HRLLELSRPYPASEADIRRFHSDDYVAFLASATGNPGVLDPRAIKRFNVGEDCPVFDGLF PFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKFH RRVLYVDIDVHHGDGVEEAFFTTNRVMTVSFHKYGDFFPGTGHITDVGAAEGKHYALNVP LSDGIDDTTFRGLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRF LRSYNVPMMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYTLHIQP KSVENLNTTKDLENIKNMILENLSKIEHVPSTQFHDRPSDPEAPEEKEEDMDKRPPQRSR LWSGGAYDSDTEDPDSLKSEGKDVTANFQMKDEPKDDL

Transcript Sequence

Transcript ID	Zm00001d050139_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:68410565:68416118:-1 gene:Zm00001d050139 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histone deacetylase description:Histone deacetylase
Sequence	GATTGCCTAAACCCCGAAATTATAAAGAAAACCGCCTCGGCCGCAACTTGACTATCTTTG TGAGGACCTTCAACCATCTCAGGCGGAATGGCGGCTTCTGGTGAGGGCGCGTCGCTGCCG TCTCCGGCGGGCGGGGAGGATGCGCACCGCCGCCGCGTCAGCTATTTCTACGAGCCGTCG ATCGGAGACTACTACTACGGGCAAGGTCACCCGATGAAGCCCCACCGCATCCGAATGGCG CACTCGCTGGTGGTCCACTACGGCCTCCACCGCCTCCTCGAGCTCTCCCGCCCCTACCCG GCCTCTGAGGCCGACATCCGCCGCTTCCACTCCGACGACTACGTCGCTTTCCTCGCGTCC GCCACCGGAAACCCGGGTGTCCTCGACCCGCGCGCCATTAAGCGCTTTAACGTCGGTGAG GACTGCCCCGTGTTCGACGGTCTCTTCCCCTTCTGCCAGGCCTCCGCTGGGGGAAGCATC GGCGCCGCCGTCAAGCTTAACCGCGGGGACGCCGACATCACCGTCAACTGGGCGGGCGGC CTCCACCACGCCAAGAAGAGCGAGGCCTCCGGGTTCTGCTACGTCAACGACATCGTCCTC GCCATCCTCGAGCTCCTCAAGTTCCACAGGCGTGTGCTATATGTAGACATTGATGTCCAC CATGGAGATGGCGTGGAGGAGGCCTTCTTCACTACAAACCGAGTCATGACTGTTTCCTTT CACAAGTATGGGGATTTTTTCCCTGGTACTGGACATATCACTGACGTTGGGGCAGCCGAA GGGAAGCATTATGCTCTGAATGTTCCCCTGAGTGATGGTATCGATGACACCACCTTTCGT GGTCTGTTTCAATGCATCATTAAGAAAGTTATGGAGGTTTATCAGCCAGACGTGGTTGTC CTCCAATGCGGAGCTGACTCTTTGGCTGGAGACAGGTTAGGTTGCTTCAACCTGTCTGTG AAGGGTCATGCTGACTGCCTCCGTTTCCTTAGGTCGTACAATGTTCCTATGATGGTTTTA GGTGGTGGAGGTTACACCATCAGAAATGTTGCACGCTGCTGGTGCTACGAGACCGCAGTT GCTGTTGGAGTTGAACCTGATAACAAGCTGCCTTACAATGATTACTATGAGTACTTTGGC CCTGATTATACTCTTCATATCCAACCAAAAAGTGTTGAAAACCTGAATACCACAAAGGAC TTGGAGAACATAAAGAACATGATATTGGAGAACCTGTCAAAGATAGAACATGTTCCCAGC ACTCAATTCCATGACAGACCGTCAGACCCTGAAGCTCCAGAGGAGAAAGAGGAGGACATG GACAAGAGGCCACCTCAGCGCAGCAGATTATGGAGCGGAGGAGCTTACGACTCTGATACA GAGGATCCTGACAGCCTGAAAAGCGAGGGTAAAGACGTAACTGCTAACTTCCAGATGAAG GATGAACCAAAAGATGATCTGTAGAAGTTTCAGAAGTGCCCCCAAAGTTACTGAGTTGTG AATGGGATCGTCGACATGCATGTTGAAGAGTGGGGACGCATCTGAACCTGTCCGTGCTGA TATCTGCCGCTGTGCATCTGTAACAGACTGAACGTTTTGCTGGTTCCAGCTTTCCTGCGT GTTGGTAACTAGACTAGATATATGGCCCTTTGGTGGGTCCCAAACTGTTGAGCTGGAGAA ATGAAGTGATTATTCTCGCATGATTTTGTAGCATGCATGTAATCATTACCCATTAGTTCA TTAGGCTATCAACAGTAGTTTACTCATCCCCATATTCAAACTTCACTATGTGCGCAAACA GTGATTTGATTGACCATATGATTAAACTTTGAAGATGGTCTTTGG