Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d050107_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:66086547:66090296:1 gene:Zm00001d050107 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:12-oxo-phytodienoic acid reductase8 description: 12-oxo-phytodienoic acid reductase8
Sequence

ATGGCCTCCACGGATCGCTCCGCGCCGGCGGAGGACCAGCAACAGCCGCAGCGCCCGTCC
CTCTTCTCGCCGTACCAGATGCCCCACTTCCGCCTCGCGCACCGGGTGGTGCTGGCGCCG
ATGACCAGGTGCCGGGCGCCCGATGCGCTCCCGGGCCCCGCGCTCGCGGAGTACTACGCG
CAGCGGTCCACGGAAGGCGGCTTGCTCATCTCCGAGGGCACCATCATCTCGCCCGCCGGC
CCTGGGTTCCCTCGTGTCCCTGGGATATACAATCAAGAGCAGACTGATGCATGGAAAAAG
GTGGTTGATGCTGTTCATGCCAAGGGAGCCATCTTTTTCTGCCAACTATGGCATGTAGGT
CGAGCTTCTCACCAAGTATATCAGCCGGGTGGTTCTGCTCCAATATCCTCTACTGATAAA
CCAATATCATCAAGATGGAGGATACTGATGCCCGATGGATCCTATGGCAAGTATCCAACT
CCGAGGCGCCTAGCCACATCCGAGATACCAGAAATTGTCGAGCAATACCGACAGGCTGCC
ATAAACGCCATCAAAGCAGGTTTCGATGGCATCGAGATCCACGGTGCCCATGGCTACCTA
ATCGACCAGTTCCTCAAGGACGGTATCAACGACAGGGCTGACGAGTACGGTGGCTCACTC
TCCAACCGCTGCCGGTTCCTCCTGGAGGTGACGCGCGCCGTGGTCTCCGCGATAGGGGCA
GACCGGGTGGCGGTCCGGGTGTCCCCGGCCATCGACCACCTCGACGCGTACGACTCCAAC
CCGCTGCAGCTCGGCCTGGCCGTAGTGGACCGCCTCAACGCTCTCCAGGAGGAGACCGGG
CGGCTGGCCTACCTGCACGTGACGCAGCCACGGTACACGGCGTACGGGCAGACGGAGTCC
GGCCAGCACGGGAGCGCCGAGGAGGAGAGCCGGCTGATGCGCGCCCTGCGGGGCGCCTAC
CGCGGCACGTTCATGTGCAGCGGTGGGTACACGCGCGAGCTCGGCGTGGAGGCCGTCGAG
TCGTGGGACGCCGACCTGGTGTCCTACGGGCGGCTGTTCATCGCTAACCCGGACCTGGTG
GAGCGGTTCCGGCGCGACGCCCCGCTGAACAGATACGTGCGCAAGACGTTCTACACCCCG
GATCCCGTCGTTGGTTACACGGACTACCCGTTCCTCGGCCAGCCTAAGGCGCGCATGTGA

Peptide Sequence

PEP ID

Zm00001d050107_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:66086547:66090296:1 gene:Zm00001d050107 transcript:Zm00001d050107_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:12-oxo-phytodienoic acid reductase8 description: 12-oxo-phytodienoic acid reductase8
Sequence

MASTDRSAPAEDQQQPQRPSLFSPYQMPHFRLAHRVVLAPMTRCRAPDALPGPALAEYYA
QRSTEGGLLISEGTIISPAGPGFPRVPGIYNQEQTDAWKKVVDAVHAKGAIFFCQLWHVG
RASHQVYQPGGSAPISSTDKPISSRWRILMPDGSYGKYPTPRRLATSEIPEIVEQYRQAA
INAIKAGFDGIEIHGAHGYLIDQFLKDGINDRADEYGGSLSNRCRFLLEVTRAVVSAIGA
DRVAVRVSPAIDHLDAYDSNPLQLGLAVVDRLNALQEETGRLAYLHVTQPRYTAYGQTES
GQHGSAEEESRLMRALRGAYRGTFMCSGGYTRELGVEAVESWDADLVSYGRLFIANPDLV
ERFRRDAPLNRYVRKTFYTPDPVVGYTDYPFLGQPKARM

Transcript Sequence

Transcript ID

Zm00001d050107_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:66086547:66090296:1 gene:Zm00001d050107 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:12-oxo-phytodienoic acid reductase8 description: 12-oxo-phytodienoic acid reductase8
Sequence

ATGGCAGACCGCTGGTGGCTGGCACTCGCTGCTCACACTCACTGTCCAGTGTCCTTGTTG
TCCACCACTCCCTCGAGTCCGTGACGCGTCAGCGTCACCGTCCGTCGTCGCAGACGAGCC
CAGTGGCGACTGGCGATTCGCTTTCGAACCGCAGTCGTCCCTGCTGTGTTCCCGGTTCCC
TCCCTTCCTCCTCCTATAGTTGGCTTCTCGCCACCCTCTGCCTTCGACCAACTTTCTCCC
TTCTCCCCTCCCCGTTCCCCTCTCCAACTCCAATCCATGGCCTCCACGGATCGCTCCGCG
CCGGCGGAGGACCAGCAACAGCCGCAGCGCCCGTCCCTCTTCTCGCCGTACCAGATGCCC
CACTTCCGCCTCGCGCACCGGGTGGTGCTGGCGCCGATGACCAGGTGCCGGGCGCCCGAT
GCGCTCCCGGGCCCCGCGCTCGCGGAGTACTACGCGCAGCGGTCCACGGAAGGCGGCTTG
CTCATCTCCGAGGGCACCATCATCTCGCCCGCCGGCCCTGGGTTCCCTCGTGTCCCTGGG
ATATACAATCAAGAGCAGACTGATGCATGGAAAAAGGTGGTTGATGCTGTTCATGCCAAG
GGAGCCATCTTTTTCTGCCAACTATGGCATGTAGGTCGAGCTTCTCACCAAGTATATCAG
CCGGGTGGTTCTGCTCCAATATCCTCTACTGATAAACCAATATCATCAAGATGGAGGATA
CTGATGCCCGATGGATCCTATGGCAAGTATCCAACTCCGAGGCGCCTAGCCACATCCGAG
ATACCAGAAATTGTCGAGCAATACCGACAGGCTGCCATAAACGCCATCAAAGCAGGTTTC
GATGGCATCGAGATCCACGGTGCCCATGGCTACCTAATCGACCAGTTCCTCAAGGACGGT
ATCAACGACAGGGCTGACGAGTACGGTGGCTCACTCTCCAACCGCTGCCGGTTCCTCCTG
GAGGTGACGCGCGCCGTGGTCTCCGCGATAGGGGCAGACCGGGTGGCGGTCCGGGTGTCC
CCGGCCATCGACCACCTCGACGCGTACGACTCCAACCCGCTGCAGCTCGGCCTGGCCGTA
GTGGACCGCCTCAACGCTCTCCAGGAGGAGACCGGGCGGCTGGCCTACCTGCACGTGACG
CAGCCACGGTACACGGCGTACGGGCAGACGGAGTCCGGCCAGCACGGGAGCGCCGAGGAG
GAGAGCCGGCTGATGCGCGCCCTGCGGGGCGCCTACCGCGGCACGTTCATGTGCAGCGGT
GGGTACACGCGCGAGCTCGGCGTGGAGGCCGTCGAGTCGTGGGACGCCGACCTGGTGTCC
TACGGGCGGCTGTTCATCGCTAACCCGGACCTGGTGGAGCGGTTCCGGCGCGACGCCCCG
CTGAACAGATACGTGCGCAAGACGTTCTACACCCCGGATCCCGTCGTTGGTTACACGGAC
TACCCGTTCCTCGGCCAGCCTAAGGCGCGCATGTGATTATTAGTTAGGTTGGTAACTATA
AGAGGCGGACTATTGTTCGTGTATTGTGGCTTGAGAAAATAAGCAAACACATGGTGGTAG
TGCTGTGCAATAAGCCTTAGGTGCAAACATGAGCCTCCTGGGCCTTTAGATAATGATCTA
ATTATAGATGTAATTATAGTTTTGTCAAGAAGTTAATGTTTATTTGCACAGCAATCAGCA
GTCATCTCTCATA