Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d050032_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:4:61315575:61321350:1 gene:Zm00001d050032 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brittle endosperm2 description:Glucose-1-phosphate adenylyltransferase
Sequence	ATGGCCGCGATAGCCTCAGCTTCGCCCAGGACCCTGATCCCTCCGCGGCCGCGCCACCAC GGCGCCGCGCCCTCCCCATCCACCTCCGACGTCTCCTCGCTCCGACTCCTCCGCGCGCAC CCGCGCCACGTCCGACGCAGCCGCGGAGTGTCCATCTCGATGCCCGTGGCGCGGAGCCGG TCGTTCGTCTTCTCCCCGCGCGCGGTGGCTGACTCCAAGAGCTCCCAGACCTGCCTGGAC CCCGACGCCAGCACGAGTGTTCTTGGAATCATTCTGGGAGGTGGTGCTGGGACTAGATTG TACCCCTTGACAAAGAAGCGTGCCAAGCCTGCAGTGCCATTGGGTGCCAACTATAGACTG ATTGATATTCCTGTCAGCAATTGTCTCAACAGCAACATATCCAAGATCTATGTGCTAACG CAATTTAACTCTGCTTCCCTCAACCGTCACCTCTCAAGAGCCTACGGGAGCAACATTGGA GGGTACAAGAATGAAGGGTTTGTTGAAGTCTTAGCTGCACAGCAGAGCCCAGATAATCCA AACTGGTTTCAGGGTACTGCAGATGCTGTAAGGCAGTACTTGTGGTTGTTTGAGGAGCAT AATGTGATGGAATTTCTAATTCTTGCTGGCGATCACCTGTACCGGATGGACTATGAAAAG TTCATTCAGGCACACAGAGAAACAAATGCTGATATTACCGTTGCTGCCCTACCGATGGAT GAGAAACGTGCAACTGCATTTGGCCTCATGAAAATTGATGAAGAAGGGAGGATCATTGAG TTTGCTGAGAAACCGAAAGGAGAGCAGTTGAAAGCAATGATGGTTGACACCACCATACTT GGCCTTGATGACGTGAGGGCAAAGGAAATGCCTTATATTGCTAGCATGGGTATCTATGTT TTCAGCAAAGATGTAATGCTTCAGCTCCTCCGTGAACAATTTCCTGAAGCCAATGACTTT GGAAGTGAGGTTATTCCAGGTGCAACCAGCATTGGAAAGAGGGAGCAGCTTACTAGAAAG CCTAGGCAGGTTCAGGCTTATCTGTATGATGGTTACTGGGAAGATATCGGTACCATTGCG GCATTTTATAATGCAAACTTGGGAATAACCAAGAAGCCAATACCAGATTTCAGCTTCTAT GACCGTTTTGCTCCAATTTATACACAACCTCGACACCTGCCACCTTCAAAGGTTCTTGAT GCTGATGTGACAGACAGTGTTATTGGTGAAGGATGTGTTATTAAAAACTGCAAGATAAAC CATTCTGTAGTTGGACTCCGATCTTGCATATCTGAAGGTGCTATCATAGAGGACAGTTTA CTAATGGGTGCGGACTACTATGAGACAGAAGCTGATAAAAAACTCCTTGCCGAAAAAGGT GGCATTCCTATTGGTATTGGGAAAAATTCATGCATCAGGAGAGCAATCATTGACAAGAAT GCTCGAATTGGAGACAATGTTAAGATACTCAATGCTGACAATGTTCAAGAAGCTGCAATG GAGACAGACGGGTACTTCATCAAAGGTGGAATTGTCACAGTGATCAAGGATGCTTTACTC CCTAGTGGAACAGTTATATGA

Peptide Sequence

PEP ID	Zm00001d050032_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:4:61315575:61321350:1 gene:Zm00001d050032 transcript:Zm00001d050032_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brittle endosperm2 description:Glucose-1-phosphate adenylyltransferase
Sequence	MAAIASASPRTLIPPRPRHHGAAPSPSTSDVSSLRLLRAHPRHVRRSRGVSISMPVARSR SFVFSPRAVADSKSSQTCLDPDASTSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRL IDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYGSNIGGYKNEGFVEVLAAQQSPDNP NWFQGTADAVRQYLWLFEEHNVMEFLILAGDHLYRMDYEKFIQAHRETNADITVAALPMD EKRATAFGLMKIDEEGRIIEFAEKPKGEQLKAMMVDTTILGLDDVRAKEMPYIASMGIYV FSKDVMLQLLREQFPEANDFGSEVIPGATSIGKREQLTRKPRQVQAYLYDGYWEDIGTIA AFYNANLGITKKPIPDFSFYDRFAPIYTQPRHLPPSKVLDADVTDSVIGEGCVIKNCKIN HSVVGLRSCISEGAIIEDSLLMGADYYETEADKKLLAEKGGIPIGIGKNSCIRRAIIDKN ARIGDNVKILNADNVQEAAMETDGYFIKGGIVTVIKDALLPSGTVI

Transcript Sequence

Transcript ID	Zm00001d050032_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:61315575:61321350:1 gene:Zm00001d050032 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brittle endosperm2 description:Glucose-1-phosphate adenylyltransferase
Sequence	GACCACCACCCCTTCCCGGCCGGACCGTGTGTCAGTGTGGAGATGGCCACTCACTCACCG ATCTCGCTTCCACCTCCACGCCAGAGGCAACGGGCTCCCCGCCGTGAGCTCTTCGGCCAC GCGGGCGTCTTGCCTCCCTCGTCCTTCCTCACCGCAGGAGGATGGCCGCGATAGCCTCAG CTTCGCCCAGGACCCTGATCCCTCCGCGGCCGCGCCACCACGGCGCCGCGCCCTCCCCAT CCACCTCCGACGTCTCCTCGCTCCGACTCCTCCGCGCGCACCCGCGCCACGTCCGACGCA GCCGCGGAGTGTCCATCTCGATGCCCGTGGCGCGGAGCCGGTCGTTCGTCTTCTCCCCGC GCGCGGTGGCTGACTCCAAGAGCTCCCAGACCTGCCTGGACCCCGACGCCAGCACGAGTG TTCTTGGAATCATTCTGGGAGGTGGTGCTGGGACTAGATTGTACCCCTTGACAAAGAAGC GTGCCAAGCCTGCAGTGCCATTGGGTGCCAACTATAGACTGATTGATATTCCTGTCAGCA ATTGTCTCAACAGCAACATATCCAAGATCTATGTGCTAACGCAATTTAACTCTGCTTCCC TCAACCGTCACCTCTCAAGAGCCTACGGGAGCAACATTGGAGGGTACAAGAATGAAGGGT TTGTTGAAGTCTTAGCTGCACAGCAGAGCCCAGATAATCCAAACTGGTTTCAGGGTACTG CAGATGCTGTAAGGCAGTACTTGTGGTTGTTTGAGGAGCATAATGTGATGGAATTTCTAA TTCTTGCTGGCGATCACCTGTACCGGATGGACTATGAAAAGTTCATTCAGGCACACAGAG AAACAAATGCTGATATTACCGTTGCTGCCCTACCGATGGATGAGAAACGTGCAACTGCAT TTGGCCTCATGAAAATTGATGAAGAAGGGAGGATCATTGAGTTTGCTGAGAAACCGAAAG GAGAGCAGTTGAAAGCAATGATGGTTGACACCACCATACTTGGCCTTGATGACGTGAGGG CAAAGGAAATGCCTTATATTGCTAGCATGGGTATCTATGTTTTCAGCAAAGATGTAATGC TTCAGCTCCTCCGTGAACAATTTCCTGAAGCCAATGACTTTGGAAGTGAGGTTATTCCAG GTGCAACCAGCATTGGAAAGAGGGAGCAGCTTACTAGAAAGCCTAGGCAGGTTCAGGCTT ATCTGTATGATGGTTACTGGGAAGATATCGGTACCATTGCGGCATTTTATAATGCAAACT TGGGAATAACCAAGAAGCCAATACCAGATTTCAGCTTCTATGACCGTTTTGCTCCAATTT ATACACAACCTCGACACCTGCCACCTTCAAAGGTTCTTGATGCTGATGTGACAGACAGTG TTATTGGTGAAGGATGTGTTATTAAAAACTGCAAGATAAACCATTCTGTAGTTGGACTCC GATCTTGCATATCTGAAGGTGCTATCATAGAGGACAGTTTACTAATGGGTGCGGACTACT ATGAGACAGAAGCTGATAAAAAACTCCTTGCCGAAAAAGGTGGCATTCCTATTGGTATTG GGAAAAATTCATGCATCAGGAGAGCAATCATTGACAAGAATGCTCGAATTGGAGACAATG TTAAGATACTCAATGCTGACAATGTTCAAGAAGCTGCAATGGAGACAGACGGGTACTTCA TCAAAGGTGGAATTGTCACAGTGATCAAGGATGCTTTACTCCCTAGTGGAACAGTTATAT GAAGTGAACGTGCGACATGCAGCTGTGTGTCTCGACATTCGACAATGATCAGCACCTGGT TACATGCGTGATCTGCAGATCAGTCTGTTGGAGATCATCGGAGCAATAAAAGTGTCATCC AAGGCATTTTTTCTTTCTTTTTGCTCTTTTGTGTCCTTCAATGTTGTAGGGTAGAATGTT GTAGCAGCAAATGTTAGTTACATGTTGAATCGACATTGGGGGCCTGGATTTGGGGATACA TCATGCTGTAAATTGATCAGTTTAATTACCATACTGTGCTGCTTTGAGCGAAGCCATGGA GACCATGCTCCACTTTTGTGCCTGACGAATATAAGCGTTGCTGGTTTGGAGTGCGGATTT TAAAG