Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d050026_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:4:60974636:60977372:-1 gene:Zm00001d050026 gene_biotype:protein_coding transcript_biotype:protein_coding description:purple acid phosphatase 23
Sequence

ATGGTTGGGGACATGACCTACGCGAACCAGTACCTCACCACCGGCGGCAAGGGAGTCCCC
TGCTTCTCCTGCTCCTTCCCCAAAGCTCCGATTCGGGAGTCCTACCAGCCAAGATGGGAT
GGATGGGGAAGATTCATGGAGCCGATTACATCGAAGATTCCGCTGATGGTGATAGAGGGG
AACCATGAGATTGAACCGCAGGGTCACGGTGGAGAGGTGACCTTCGCGTCTTACTTGGCA
CGGTTCGCTGTTCCATCCAAGGAGTCTGGATCCAACACCAAATTCTACTACTCCTTCAAC
GCCGGTGGCATCCATTTTATCATGCTCGGTGCCTACATCGACTACAACCGCACAGGAGTT
CAGTACTCGTGGTTGGAAAAGGATTTGCAGAGGGTTGATCGACGAGCCACCCCTTGGGTC
GTGGCTGCTTGGCACCCACCTTGGTATAACAGCTATTCCTCGCACTACCAAGAATTCGAG
TGCATGAGGCAAGAAATGGAAGAACTTTTATATGAATATCAGGTTGACATTGTTTTCTCA
GGACATGTACATGCATACGAAAGGATGGACCGAGTATTTAACTACACATTGGACCCCTGT
GGCCCGATTTACATCGGCATTGGAGACGGCGGGAACATTGAAAAAATTGACATGGATCAT
GCTGATGACCCTGGAAAGTGTCCCTCACCAAGTGATAACCACCCTGAATTTGGTGGGCTC
TGCCATCTGAACTTCACTTCTGGCCCTGCCAAGGGCAAATTCTGCTGGGACCGACAGCCA
GAATGGAGTGCATACAGAGAGAGCAGTTTTGGTCATGGGATTCTAGAGGTCCTGAATTCA
ACATATGCCTTATGGACATGGCACCGTAACCAGGACGCATATGCAGAGAACAGTGTGGGA
GACCAGATCTACATTGTACGACAGCCTGACAAGTGCCTTCTGCAGCCAGCTAGTGCGTCG
TCTCTCAATTGA

Peptide Sequence

PEP ID

Zm00001d050026_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:4:60974636:60977372:-1 gene:Zm00001d050026 transcript:Zm00001d050026_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:purple acid phosphatase 23
Sequence

MVGDMTYANQYLTTGGKGVPCFSCSFPKAPIRESYQPRWDGWGRFMEPITSKIPLMVIEG
NHEIEPQGHGGEVTFASYLARFAVPSKESGSNTKFYYSFNAGGIHFIMLGAYIDYNRTGV
QYSWLEKDLQRVDRRATPWVVAAWHPPWYNSYSSHYQEFECMRQEMEELLYEYQVDIVFS
GHVHAYERMDRVFNYTLDPCGPIYIGIGDGGNIEKIDMDHADDPGKCPSPSDNHPEFGGL
CHLNFTSGPAKGKFCWDRQPEWSAYRESSFGHGILEVLNSTYALWTWHRNQDAYAENSVG
DQIYIVRQPDKCLLQPASASSLN

Transcript Sequence

Transcript ID

Zm00001d050026_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:60974636:60977372:-1 gene:Zm00001d050026 gene_biotype:protein_coding transcript_biotype:protein_coding description:purple acid phosphatase 23
Sequence

ACTGCTGTTGCTAGTACCACTATGCTTCGCGCTTCTGGTTGAGAGCGGCGGCATCCCCAC
GACGCTGGACGGGCCGTTTCCGCCGGCCACGCGCGCGTTCGACCGCGCGCTGCGGCAGGG
CAGCAACGACGTCCCGCTCACGGATCCGCGCCTTGCGCCCCGCGTGCAGCCCCCGGCGCC
CGAGCAGATCGCGCTCGCCGCCGGCAGCGAAGTCTGGTACGGCGAGCGCAGCGCCGCCGA
CGCCGCATCCTATCCGCACGTGGTCACGGGGTCCGCCGAGGTGTACAGCCAGCTGTACCC
GTACCCGGGCCTGCTCAACTACACCTCTGGCGCCATCCATCACGTCCGTCTCCGCGGCCT
GCGCCCTGCCACGCGCTACTACTACCGCTGCGGCGACAGCAGCCTCCCCGGCGGCCTCAG
CGACGAGCACTCCTTCACCACCCTGCCCGCCACCGGCGCCGGATGCTACCCGCGCCGCGT
CGCTGTGGTAGGTGACCTTGGCCTCACGGGGAACTCCACCGCCACCGTCGACCACCTCGC
CCGCAACGACCCATCCCTGGTCCTCATGGTTGGGGACATGACCTACGCGAACCAGTACCT
CACCACCGGCGGCAAGGGAGTCCCCTGCTTCTCCTGCTCCTTCCCCAAAGCTCCGATTCG
GGAGTCCTACCAGCCAAGATGGGATGGATGGGGAAGATTCATGGAGCCGATTACATCGAA
GATTCCGCTGATGGTGATAGAGGGGAACCATGAGATTGAACCGCAGGGTCACGGTGGAGA
GGTGACCTTCGCGTCTTACTTGGCACGGTTCGCTGTTCCATCCAAGGAGTCTGGATCCAA
CACCAAATTCTACTACTCCTTCAACGCCGGTGGCATCCATTTTATCATGCTCGGTGCCTA
CATCGACTACAACCGCACAGGAGTTCAGTACTCGTGGTTGGAAAAGGATTTGCAGAGGGT
TGATCGACGAGCCACCCCTTGGGTCGTGGCTGCTTGGCACCCACCTTGGTATAACAGCTA
TTCCTCGCACTACCAAGAATTCGAGTGCATGAGGCAAGAAATGGAAGAACTTTTATATGA
ATATCAGGTTGACATTGTTTTCTCAGGACATGTACATGCATACGAAAGGATGGACCGAGT
ATTTAACTACACATTGGACCCCTGTGGCCCGATTTACATCGGCATTGGAGACGGCGGGAA
CATTGAAAAAATTGACATGGATCATGCTGATGACCCTGGAAAGTGTCCCTCACCAAGTGA
TAACCACCCTGAATTTGGTGGGCTCTGCCATCTGAACTTCACTTCTGGCCCTGCCAAGGG
CAAATTCTGCTGGGACCGACAGCCAGAATGGAGTGCATACAGAGAGAGCAGTTTTGGTCA
TGGGATTCTAGAGGTCCTGAATTCAACATATGCCTTATGGACATGGCACCGTAACCAGGA
CGCATATGCAGAGAACAGTGTGGGAGACCAGATCTACATTGTACGACAGCCTGACAAGTG
CCTTCTGCAGCCAGCTAGTGCGTCGTCTCTCAATTGATAGCCCCATTGGAGGATGCCCTT
CTCTAGTGAGTAGTAACAGCTCCGGTGGGTCCATTACAAATGGCCAGCTCTCCTACAAAA
TGTTTGTAATTATGTGTGTAGCTTTAATGTGAAAGAGTTAGGTGGTCTGAGCAGTACTCA
TCTCCTTTTTAATATAATACTTTAGGGTTGTT