Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049986_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:57081535:57084071:1 gene:Zm00001d049986 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ATGGCGCCGCCGCTCGCCGCCGCCCTCCGCCCTCACCTCTCCCGCCTCGGCCAAACCCTC TCGTCTCGTCTTCTTCGCCTCTCCACCTCCCATTGTCCCTCCGACCAGAGCGACTTCGAA CCAGACCCCGACCACCCCATCCTCTCTGCCCCTGACAATGACGACGGTGAGCTCGCCTCC TTCCTCCACCACCTCTCCAGCGCGGCCTCCAATACCTCATCCCCGAAGGAGGCCCTCTCC TTCCTCCTTTCCATGTCCACGGGCCCGTTGCCGGCCTCCCACGCTCTCCTAGTCCGCGCG CTCTGGGATCTGCGCCGCGACCCGGACGCTGCCGCGTTAGCGCTCCGGTACGGAGACGAG TGCAGCGCCGTGGATGGGACCGATGGGGCGGGTCTACCGCCGCCGCCTGAAGCGTGGCAC CTGGCCGTCTGGGCCGCGGGTAAGGCGAGGCGGTTCGACCTCGCATGGGAGATCGTGCGG CGGATGCGGAACCGCGGTGTGCTCACCTGCCGGGTCATGGTTATCCTGATGGAGAGGTAT GCAGCTGCCAGTGAAGTAAATAAAGCAATCAAAACATTTGATGTCATGGAGAAGTTTAAA ATCGAGTCAGATCAAAGTGTATTCTACTCCCTTCTTCACGCTCTTTGCAAAATAAAAAAC ATTGAGGATGCTGAGGAGTTGCTTTTTCTGAGAAAGAAATTCTTCCCACTTACTGCAGAA GGTTTCAATATAATTCTAGATGGTTGGTGTAATGTGATCACCGATGTGGCTGAAGCAAAG AGAGTTTGGAGAGAAATGTCAAATCACTGCATTACTCCCGATGGCATGTCCTATACTCTC ATGATCAGTTGTTTCTCAAAAGTAGGAAACCTTTTTGATACTCTAAGGGTTTATGATGAG ATGAAAAAGAGAGGTTGGATTCCTGGTATTGTTGTTTACAATTCACTTGTCTATGTTCTG ACAAGAGAAAATTGTGTGAAGGATGCACACAATATATTTAGCAAACTTACAGATGAAGGC CTCCAGCCGGATGTTGAAACATATAACAATATGATAGTTCCTCTCTGTGAAAGTTGTAAG CTTGATGAAGCGCGAAAGGTAATGGAAAGCATGATACTTAGAGGCATTGTTCCTACCATT TCGACTTACCATGCATTTTTAAAGCAAGAAGGCATTGATGAATCACTGAAGCTCTTGCAG AAAATGAAGGAGGATGGTTGTGGCCCTAAGAGTGACACATTTGTCATGCTTATTGATAAA TTTTTCTTGCTGAACGAGTCGGGGAATGCTCTAAGAGTGTGGAATGAAATGAGAAAATAT GAGATCAGCCCTGTCCGTGCACACTATATGACACTGGTCCAAGGTTTAGTGAAACATGGA TGTATACCAAGAGCTTTAGAGTACTATGACGAAATGAAGGAAAAAGGTTTTGCCTCTGAT ACACAACTTGATAAGGAATTTAAAACCTTTTTGTTGAAAAACAGAGACCACTGGAGAGGA GCAGGCAAATACAATATCATTCCCCAGCGTGGCAAATATTTTACAAAGCAGTCAAGAATG CAATAA

Peptide Sequence

PEP ID	Zm00001d049986_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:57081535:57084071:1 gene:Zm00001d049986 transcript:Zm00001d049986_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	MAPPLAAALRPHLSRLGQTLSSRLLRLSTSHCPSDQSDFEPDPDHPILSAPDNDDGELAS FLHHLSSAASNTSSPKEALSFLLSMSTGPLPASHALLVRALWDLRRDPDAAALALRYGDE CSAVDGTDGAGLPPPPEAWHLAVWAAGKARRFDLAWEIVRRMRNRGVLTCRVMVILMERY AAASEVNKAIKTFDVMEKFKIESDQSVFYSLLHALCKIKNIEDAEELLFLRKKFFPLTAE GFNIILDGWCNVITDVAEAKRVWREMSNHCITPDGMSYTLMISCFSKVGNLFDTLRVYDE MKKRGWIPGIVVYNSLVYVLTRENCVKDAHNIFSKLTDEGLQPDVETYNNMIVPLCESCK LDEARKVMESMILRGIVPTISTYHAFLKQEGIDESLKLLQKMKEDGCGPKSDTFVMLIDK FFLLNESGNALRVWNEMRKYEISPVRAHYMTLVQGLVKHGCIPRALEYYDEMKEKGFASD TQLDKEFKTFLLKNRDHWRGAGKYNIIPQRGKYFTKQSRMQ

Transcript Sequence

Transcript ID	Zm00001d049986_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:57081535:57084071:1 gene:Zm00001d049986 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	TGCGTGCCACTGGCTTGTTGAGATCGACGCACCTGTCCCAAGCTCCAAAATATTCGCATC TCCTGGCAATCTGCCATGGCGCCGCCGCTCGCCGCCGCCCTCCGCCCTCACCTCTCCCGC CTCGGCCAAACCCTCTCGTCTCGTCTTCTTCGCCTCTCCACCTCCCATTGTCCCTCCGAC CAGAGCGACTTCGAACCAGACCCCGACCACCCCATCCTCTCTGCCCCTGACAATGACGAC GGTGAGCTCGCCTCCTTCCTCCACCACCTCTCCAGCGCGGCCTCCAATACCTCATCCCCG AAGGAGGCCCTCTCCTTCCTCCTTTCCATGTCCACGGGCCCGTTGCCGGCCTCCCACGCT CTCCTAGTCCGCGCGCTCTGGGATCTGCGCCGCGACCCGGACGCTGCCGCGTTAGCGCTC CGGTACGGAGACGAGTGCAGCGCCGTGGATGGGACCGATGGGGCGGGTCTACCGCCGCCG CCTGAAGCGTGGCACCTGGCCGTCTGGGCCGCGGGTAAGGCGAGGCGGTTCGACCTCGCA TGGGAGATCGTGCGGCGGATGCGGAACCGCGGTGTGCTCACCTGCCGGGTCATGGTTATC CTGATGGAGAGGTATGCAGCTGCCAGTGAAGTAAATAAAGCAATCAAAACATTTGATGTC ATGGAGAAGTTTAAAATCGAGTCAGATCAAAGTGTATTCTACTCCCTTCTTCACGCTCTT TGCAAAATAAAAAACATTGAGGATGCTGAGGAGTTGCTTTTTCTGAGAAAGAAATTCTTC CCACTTACTGCAGAAGGTTTCAATATAATTCTAGATGGTTGGTGTAATGTGATCACCGAT GTGGCTGAAGCAAAGAGAGTTTGGAGAGAAATGTCAAATCACTGCATTACTCCCGATGGC ATGTCCTATACTCTCATGATCAGTTGTTTCTCAAAAGTAGGAAACCTTTTTGATACTCTA AGGGTTTATGATGAGATGAAAAAGAGAGGTTGGATTCCTGGTATTGTTGTTTACAATTCA CTTGTCTATGTTCTGACAAGAGAAAATTGTGTGAAGGATGCACACAATATATTTAGCAAA CTTACAGATGAAGGCCTCCAGCCGGATGTTGAAACATATAACAATATGATAGTTCCTCTC TGTGAAAGTTGTAAGCTTGATGAAGCGCGAAAGGTAATGGAAAGCATGATACTTAGAGGC ATTGTTCCTACCATTTCGACTTACCATGCATTTTTAAAGCAAGAAGGCATTGATGAATCA CTGAAGCTCTTGCAGAAAATGAAGGAGGATGGTTGTGGCCCTAAGAGTGACACATTTGTC ATGCTTATTGATAAATTTTTCTTGCTGAACGAGTCGGGGAATGCTCTAAGAGTGTGGAAT GAAATGAGAAAATATGAGATCAGCCCTGTCCGTGCACACTATATGACACTGGTCCAAGGT TTAGTGAAACATGGATGTATACCAAGAGCTTTAGAGTACTATGACGAAATGAAGGAAAAA GGTTTTGCCTCTGATACACAACTTGATAAGGAATTTAAAACCTTTTTGTTGAAAAACAGA GACCACTGGAGAGGAGCAGGCAAATACAATATCATTCCCCAGCGTGGCAAATATTTTACA AAGCAGTCAAGAATGCAATAACAAATGTGGGGTTAATAAATTTGCTTCTAGTGCCTTTGT GATATGAGGACTTCATTTCAAAAAATTTCAATATGGACCACAATGAGGTAAATATAGTTA ACCTGTTCTTGAACTCTGACCAATGGTAAAAAAGTAAAATCTATGTGAATCTAATTATAA AAAGATAATAAACACAGCAGTTGACTGTTTTTCTGTAAATAGTTACCTTTGAACTAAGTT GTGTGATACAAATATACAATGGTCATGCGTCATTGAAGTCTATGTTCAT