Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049914_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:4:52306739:52310011:1 gene:Zm00001d049914 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein UPSTREAM OF FLC
Sequence	ATGGCTCCTCCAGCAGGGTCTGGGGCAGCGACGGAGGGAGGGCCGGCACGGCGGCGCGGC ACCGGCACCGGTACCAGCCCCGGCCGCACCAAAGTGTGGGTCGAGCCGCCGGGCAAGAGC CACCACCAGACCCCGGCGCGGTCGCTGCCCCCGCCCTCGCCCCCGGCCCCGTCGGTGGCG GCCAAGAGGGTGTCCGTGGTGTACTACCTTTGCCGCAACCGCCATCTGGAGCACCCGCAC TTAATCGAGGTGCCGCTCGCCGCCCCGGAGGAAGGTCTCTACCTGCGAGATGTGATTAAC CGCCTCAACGTGCTGCGCGGGAAGGGCATGTCCTCCAAGTATTCCTGGTCTTGCAAGAGG AGCTACAAGAACGGCTTCGTGTGGCACGATCTGTCCGACGACGACCTGGTGCTCCCCGCG CAGGGCAACGAGTACATCCTCAAGGGCTCCGAGCTTCTTGACCGCTCGCCGCCGCTAGAT CGGCAGCAGAATGGCGTTAGCAACCCAAAGGTGGAGGGCCTCAAGCCATGCAAGGAAGAG TCCCCTCAGTCGCGGGGCTCGCAAGAAGGATGCTCGTCGTCATCGTCTTCGTCTGCCCTT GGCAAGGAGATCTCACCTCCACCTGCCACTCGACGGCCACAGCAGCAGGCGCAATCAGCA GTGCTGCCATCGTCGTCGGCTTCCACCAACCATGAAGATGACCTGTGCCCGACCGCGCAT TCAGGCTCGTCCGGCAACCAGTCCCCTGAACCTGCAGGAAGAAATGCTCCATTGTCAGAG GCTAGCTCCCCGGGACCTTCCGAATACAGGGTCTGCAGACCCATCGGAGCTCAGGATGCC GCGACACAAACAGATGACAGTGAGAGGGATGTTGCTAAAACCCATACTTGCGTGGTCGGA GTGTCCATGGATACGACGTTAGATGCTGAGATTCAGGAATGTCATCAAAGGAGCTCACTG CTGTCACCAAAGGTACCCAAGATTGTTCAGGAATCACCGGCCCTGTGTTCCTCTGATGCT TCACCGGGTGTCAGAGTTGAGACCTTGGAGTCCCTAATAAGAGCAGAAGCCTGTAGGAGA AGTAGCTTTAGAACACTAGAGGAGGAACACATGCTTGGCCCAATTGGTGTGAAACTGAAG CCAGCCAATTTGCTAATGCAGCTTATCACTTGTGGATCTATATCTGTTAAAGAACACCGA GGCTTTGGGTTCATCCCAACGTACAGGCCTCGGTTTACACAAGTTGAGTTCCCTTCGTCA GTGTTCTCCACTCCTGTGGCATTGCGACACCTTGACAAAATCCCCTGCAATACAAGAACA ATCGGGACGAGAGCTCCAGAGTCTGAACGTTTCAGTGGGAGCTTGGTTGAGACCAAGATG CAGGACGAGTCAAGGAGAGGAATCAGCTCACTCAAACGCTCATCATCTTATGACGAGGAT AGAGTTTATAGAGCAGCACATTCCAAAAGTGATACAGAAAACTCTTGTGAGTCAGGTAGT TTCAGGTGTCTTCCGCAGACTATCAGAATCATATCATGTAAGCAATCGAGAAATGGAACA ATACTCTCCCCTTTCTCTGATGTGAGAAACAGCTCTAGTCAACAAGAATATAGTACTAGA TCCTCACCACTGGGTTCATCAAAGAGTGCAAGCAATAGGATGACTGATCCATCACTGGGT AAAGTAGATTCATTCCACAAGGAAAAGGACATGATCAAGATCGAAGAAAGGCTTCCTTCT GGAGCTCGGGTTATAATCCAATCTGCACCTTTGTGTGAAGATAGTGATGGCAGCAATGAA TCACTGTAA

Peptide Sequence

PEP ID	Zm00001d049914_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:4:52306739:52310011:1 gene:Zm00001d049914 transcript:Zm00001d049914_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein UPSTREAM OF FLC
Sequence	MAPPAGSGAATEGGPARRRGTGTGTSPGRTKVWVEPPGKSHHQTPARSLPPPSPPAPSVA AKRVSVVYYLCRNRHLEHPHLIEVPLAAPEEGLYLRDVINRLNVLRGKGMSSKYSWSCKR SYKNGFVWHDLSDDDLVLPAQGNEYILKGSELLDRSPPLDRQQNGVSNPKVEGLKPCKEE SPQSRGSQEGCSSSSSSSALGKEISPPPATRRPQQQAQSAVLPSSSASTNHEDDLCPTAH SGSSGNQSPEPAGRNAPLSEASSPGPSEYRVCRPIGAQDAATQTDDSERDVAKTHTCVVG VSMDTTLDAEIQECHQRSSLLSPKVPKIVQESPALCSSDASPGVRVETLESLIRAEACRR SSFRTLEEEHMLGPIGVKLKPANLLMQLITCGSISVKEHRGFGFIPTYRPRFTQVEFPSS VFSTPVALRHLDKIPCNTRTIGTRAPESERFSGSLVETKMQDESRRGISSLKRSSSYDED RVYRAAHSKSDTENSCESGSFRCLPQTIRIISCKQSRNGTILSPFSDVRNSSSQQEYSTR SSPLGSSKSASNRMTDPSLGKVDSFHKEKDMIKIEERLPSGARVIIQSAPLCEDSDGSNE SL

Transcript Sequence

Transcript ID	Zm00001d049914_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:52306739:52310011:1 gene:Zm00001d049914 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein UPSTREAM OF FLC
Sequence	CCTAATCGCTCGCCTCGTTTCATCACCTGAGCTCTCCTAATCTCATTCACCGTTGCTTGC TCTTTGAATTGCCTTTGCCCCCATTTGCTTTCCTGTTTCTTCCATCCCATCCGTACCAGC TGACGGTGCCCGGGTTCCATGCCCAGCGGCCAGCGCCTTGTGACCTGATCCGCGGCTCGT CCATTCCTCCCTCCGTGAATGGCTCCTCCAGCAGGGTCTGGGGCAGCGACGGAGGGAGGG CCGGCACGGCGGCGCGGCACCGGCACCGGTACCAGCCCCGGCCGCACCAAAGTGTGGGTC GAGCCGCCGGGCAAGAGCCACCACCAGACCCCGGCGCGGTCGCTGCCCCCGCCCTCGCCC CCGGCCCCGTCGGTGGCGGCCAAGAGGGTGTCCGTGGTGTACTACCTTTGCCGCAACCGC CATCTGGAGCACCCGCACTTAATCGAGGTGCCGCTCGCCGCCCCGGAGGAAGGTCTCTAC CTGCGAGATGTGATTAACCGCCTCAACGTGCTGCGCGGGAAGGGCATGTCCTCCAAGTAT TCCTGGTCTTGCAAGAGGAGCTACAAGAACGGCTTCGTGTGGCACGATCTGTCCGACGAC GACCTGGTGCTCCCCGCGCAGGGCAACGAGTACATCCTCAAGGGCTCCGAGCTTCTTGAC CGCTCGCCGCCGCTAGATCGGCAGCAGAATGGCGTTAGCAACCCAAAGGTGGAGGGCCTC AAGCCATGCAAGGAAGAGTCCCCTCAGTCGCGGGGCTCGCAAGAAGGATGCTCGTCGTCA TCGTCTTCGTCTGCCCTTGGCAAGGAGATCTCACCTCCACCTGCCACTCGACGGCCACAG CAGCAGGCGCAATCAGCAGTGCTGCCATCGTCGTCGGCTTCCACCAACCATGAAGATGAC CTGTGCCCGACCGCGCATTCAGGCTCGTCCGGCAACCAGTCCCCTGAACCTGCAGGAAGA AATGCTCCATTGTCAGAGGCTAGCTCCCCGGGACCTTCCGAATACAGGGTCTGCAGACCC ATCGGAGCTCAGGATGCCGCGACACAAACAGATGACAGTGAGAGGGATGTTGCTAAAACC CATACTTGCGTGGTCGGAGTGTCCATGGATACGACGTTAGATGCTGAGATTCAGGAATGT CATCAAAGGAGCTCACTGCTGTCACCAAAGGTACCCAAGATTGTTCAGGAATCACCGGCC CTGTGTTCCTCTGATGCTTCACCGGGTGTCAGAGTTGAGACCTTGGAGTCCCTAATAAGA GCAGAAGCCTGTAGGAGAAGTAGCTTTAGAACACTAGAGGAGGAACACATGCTTGGCCCA ATTGGTGTGAAACTGAAGCCAGCCAATTTGCTAATGCAGCTTATCACTTGTGGATCTATA TCTGTTAAAGAACACCGAGGCTTTGGGTTCATCCCAACGTACAGGCCTCGGTTTACACAA GTTGAGTTCCCTTCGTCAGTGTTCTCCACTCCTGTGGCATTGCGACACCTTGACAAAATC CCCTGCAATACAAGAACAATCGGGACGAGAGCTCCAGAGTCTGAACGTTTCAGTGGGAGC TTGGTTGAGACCAAGATGCAGGACGAGTCAAGGAGAGGAATCAGCTCACTCAAACGCTCA TCATCTTATGACGAGGATAGAGTTTATAGAGCAGCACATTCCAAAAGTGATACAGAAAAC TCTTGTGAGTCAGGTAGTTTCAGGTGTCTTCCGCAGACTATCAGAATCATATCATGTAAG CAATCGAGAAATGGAACAATACTCTCCCCTTTCTCTGATGTGAGAAACAGCTCTAGTCAA CAAGAATATAGTACTAGATCCTCACCACTGGGTTCATCAAAGAGTGCAAGCAATAGGATG ACTGATCCATCACTGGGTAAAGTAGATTCATTCCACAAGGAAAAGGACATGATCAAGATC GAAGAAAGGCTTCCTTCTGGAGCTCGGGTTATAATCCAATCTGCACCTTTGTGTGAAGAT AGTGATGGCAGCAATGAATCACTGTAAGGGGCTGTGTTACATATGTTTTTTTTCTTTTTA TTTCATTTTACTGAGAATGACATTTGTTGGAATTTGGTGCTTGTGTGTGGCATAGCTTTT GGAGTAGGTTCAAAGGTATTGATTTTGTAAACTGTGAATGTGATAGTCAACATTTTCTCA CACCTTGAAGAAGAGAATACTTTATCTTGCTTTAAAAGGTCTGCTTTTGTATCTTAATGC AGTCAGTTTACTGGCTTTATT