Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049905_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:51609750:51613147:-1 gene:Zm00001d049905 gene_biotype:protein_coding transcript_biotype:protein_coding description:ABC transporter F family member 1
Sequence	ATGGTGTCGGACGCCAGCAAGAAGAAGGCCGCGCAGAAGAAGGCGGCCGCCGCCGCCAAG AGGGGAGCCAAGGTCCCGACCCCTTCATCTTCGTCCTCTGCCGACGCTAAATCCATCGGT GCCGTGGCCGCGCTCAAGCTCTCCGATCGCACCTGCACCGGCGTCCTCGCCTCCCACCCG CTCTCCAGAGATATCCACATAGAGTCTCTTTCATTAACGTTTCATGGCCATGACCTCATT GTAGATTCTGAGTTGGAGCTCAACTATGGGAGGCGTTATGGTTTGCTTGGCCTTAATGGC TGTGGAAAATCTACTCTTCTCACTGCGATAGGCTGCAGAGAACTCCCTATACCTGAACAC ATGGACATATACCATCTCACCCATGAGATCGAGGCTTCAGACATGTCTGCACTACAAGCT GTTGTCTGTTGTGATGAAGAAAGAATGAAGTTGGAAAAGGAAGCAGAGATTTTGGCTGCA CAGGATGACGGTGGTGGTGATGCTTTGGATCGTGTATATGAGCGTCTAGAAGCTATTGAT GCATCAACTGCTGAAAAGCGTGCTGCTGAGATATTATATGGTTTAGGTTTTAACAAGCAA ATGCAAGCTAAGAAAACTCGAGATTTTTCTGGTGGTTGGCGTATGAGGATTGCTTTGGCT AGAGCACTCTTCATGAATCCAACAATCCTTTTGCTTGATGAGCCTACGAATCATCTTGAT CTTGAGGCATGTGTCTGGTTGGAAGAGACGCTAAAGAAATTTGACCGCATACTGGTTGTC ATATCGCACTCCCAGGACTTTCTGAATGGTGTGTGCACTAACATCATCCATATGCAGAAC AAGAAGCTAAAGTTATATACTGGGAATTATGACCAATACATTCAGACACGCTCCGAGCTT GAAGAAAATCAGATGAAGCAGTTCAGGTGGGAGCAGGAGCAGATTGCATCAATGAAGGAG TACATTGCACGGTTTGGCCATGGGTCTGCAAAGCTTGCACGTCAGGCTCAGAGCAAGGAG AAAACTCTGGCAAAGATGGAGCGTGGTGGGCTCACCGAGAAGGTTGTTAGGGACAAAATA CTGGTCTTCCGCTTCACAAATGTTGGCAAACTTCCACCACCAGTGCTTCAGTTTGTTGAG GTCACGTTTGGGTACACACCAGATAATCTCTTGTACAAGAAGCTTGACTTTGGTGTTGAC CTGGACTCTAGGATTGCATTGGTTGGTCCCAATGGCGCAGGGAAGAGCACTCTTCTGAAG CTGATGACAGGTGAGCTGGTTCCATTGGACGGTATGGTGAGACGGCACAATCACCTGCGC ATCGCACAGTTCCACCAGCATCTGGCAGAGAAGCTGGACCTGGACATGTCGGCCCTGCAA TACATGATGAAGGAATACCCTGGGAACGAAGAAGAGCGGATGAGAGCCGCAGTTGGTAAG TTTGGGCTGTCAGGGAAGGCTCAGGTGATGCCGATGAGGAATCTGTCTGACGGGCAGAGG AGCCGTGTCATCTTTGCGTGGCTGGCATACAGGCAGCCGCAGCTATTGCTGCTGGACGAG CCGACGAACCATCTTGATATCGAGACCATCGACTCCCTAGCGGAGGCGCTGAACGAGTGG GACGGCGGTCTGGTCCTGGTGAGCCATGACTTCAGGCTGATCAACCAGGTTGCTCATGAG ATCTGGGTTTGTGAGAATCAGGCAGTGACAAGGTGGGAAGGCGATATCATGGATTTCAAG GAGCACTTGAGAAGCAAGGCTTGTCTATCGGATTAA

Peptide Sequence

PEP ID	Zm00001d049905_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:51609750:51613147:-1 gene:Zm00001d049905 transcript:Zm00001d049905_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:ABC transporter F family member 1
Sequence	MVSDASKKKAAQKKAAAAAKRGAKVPTPSSSSSADAKSIGAVAALKLSDRTCTGVLASHP LSRDIHIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPEH MDIYHLTHEIEASDMSALQAVVCCDEERMKLEKEAEILAAQDDGGGDALDRVYERLEAID ASTAEKRAAEILYGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLD LEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQNKKLKLYTGNYDQYIQTRSEL EENQMKQFRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVRDKI LVFRFTNVGKLPPPVLQFVEVTFGYTPDNLLYKKLDFGVDLDSRIALVGPNGAGKSTLLK LMTGELVPLDGMVRRHNHLRIAQFHQHLAEKLDLDMSALQYMMKEYPGNEEERMRAAVGK FGLSGKAQVMPMRNLSDGQRSRVIFAWLAYRQPQLLLLDEPTNHLDIETIDSLAEALNEW DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKEHLRSKACLSD

Transcript Sequence

Transcript ID	Zm00001d049905_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:51609750:51613147:-1 gene:Zm00001d049905 gene_biotype:protein_coding transcript_biotype:protein_coding description:ABC transporter F family member 1
Sequence	ACCACAATCCTAGTCTTGTGGTGGTGTGCTGTGCTGTCGTCTCTCTCCGATCTTCCCGAT TCTTCTTACCCCTTCTTCGTCAAGCCGCAGCCGTCGCCTCCCTTGCTCACCACCATGGTG TCGGACGCCAGCAAGAAGAAGGCCGCGCAGAAGAAGGCGGCCGCCGCCGCCAAGAGGGGA GCCAAGGTCCCGACCCCTTCATCTTCGTCCTCTGCCGACGCTAAATCCATCGGTGCCGTG GCCGCGCTCAAGCTCTCCGATCGCACCTGCACCGGCGTCCTCGCCTCCCACCCGCTCTCC AGAGATATCCACATAGAGTCTCTTTCATTAACGTTTCATGGCCATGACCTCATTGTAGAT TCTGAGTTGGAGCTCAACTATGGGAGGCGTTATGGTTTGCTTGGCCTTAATGGCTGTGGA AAATCTACTCTTCTCACTGCGATAGGCTGCAGAGAACTCCCTATACCTGAACACATGGAC ATATACCATCTCACCCATGAGATCGAGGCTTCAGACATGTCTGCACTACAAGCTGTTGTC TGTTGTGATGAAGAAAGAATGAAGTTGGAAAAGGAAGCAGAGATTTTGGCTGCACAGGAT GACGGTGGTGGTGATGCTTTGGATCGTGTATATGAGCGTCTAGAAGCTATTGATGCATCA ACTGCTGAAAAGCGTGCTGCTGAGATATTATATGGTTTAGGTTTTAACAAGCAAATGCAA GCTAAGAAAACTCGAGATTTTTCTGGTGGTTGGCGTATGAGGATTGCTTTGGCTAGAGCA CTCTTCATGAATCCAACAATCCTTTTGCTTGATGAGCCTACGAATCATCTTGATCTTGAG GCATGTGTCTGGTTGGAAGAGACGCTAAAGAAATTTGACCGCATACTGGTTGTCATATCG CACTCCCAGGACTTTCTGAATGGTGTGTGCACTAACATCATCCATATGCAGAACAAGAAG CTAAAGTTATATACTGGGAATTATGACCAATACATTCAGACACGCTCCGAGCTTGAAGAA AATCAGATGAAGCAGTTCAGGTGGGAGCAGGAGCAGATTGCATCAATGAAGGAGTACATT GCACGGTTTGGCCATGGGTCTGCAAAGCTTGCACGTCAGGCTCAGAGCAAGGAGAAAACT CTGGCAAAGATGGAGCGTGGTGGGCTCACCGAGAAGGTTGTTAGGGACAAAATACTGGTC TTCCGCTTCACAAATGTTGGCAAACTTCCACCACCAGTGCTTCAGTTTGTTGAGGTCACG TTTGGGTACACACCAGATAATCTCTTGTACAAGAAGCTTGACTTTGGTGTTGACCTGGAC TCTAGGATTGCATTGGTTGGTCCCAATGGCGCAGGGAAGAGCACTCTTCTGAAGCTGATG ACAGGTGAGCTGGTTCCATTGGACGGTATGGTGAGACGGCACAATCACCTGCGCATCGCA CAGTTCCACCAGCATCTGGCAGAGAAGCTGGACCTGGACATGTCGGCCCTGCAATACATG ATGAAGGAATACCCTGGGAACGAAGAAGAGCGGATGAGAGCCGCAGTTGGTAAGTTTGGG CTGTCAGGGAAGGCTCAGGTGATGCCGATGAGGAATCTGTCTGACGGGCAGAGGAGCCGT GTCATCTTTGCGTGGCTGGCATACAGGCAGCCGCAGCTATTGCTGCTGGACGAGCCGACG AACCATCTTGATATCGAGACCATCGACTCCCTAGCGGAGGCGCTGAACGAGTGGGACGGC GGTCTGGTCCTGGTGAGCCATGACTTCAGGCTGATCAACCAGGTTGCTCATGAGATCTGG GTTTGTGAGAATCAGGCAGTGACAAGGTGGGAAGGCGATATCATGGATTTCAAGGAGCAC TTGAGAAGCAAGGCTTGTCTATCGGATTAAGGGAAGGCCTTGGCTTTCCTTACCTTCTCT TTGGAGATGTATTATCCCTTGTATAATTATGTATTATTATAGGCCCTCCAAGTTTTACTA GTAGCTAGCTGATCATCTGAGCAAGTACCTCTGTATCTGTATCCTGCTGAGTCTCATAAT AAGAAGCGAAAGTTTTGTAGTACTAACGTAATTGTCACGGCAGGAAGTGCCATGGAGAGC AAGGATGCGGGAGAAGAGAGGCTGGGAGACTGAAGAAGCAGGAAGTGCGTGGTGTGCGTG CTGTTGGGCTCAATGTGTGTGGGCGTGAGTTTGGTGGGTTCGGCCCATGTAAGTGACCTA TAATTCTGTAGCGAACTGAGAATAAGGCAGACAAGAAATAGAACCAGAGAAAAGTTCCCA ACCGT