Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049894_T029
CDS Infomation	cds chromosome:B73_RefGen_v4:4:51272227:51281194:1 gene:Zm00001d049894 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 15a
Sequence	ATGCCCTCTCCTTGTTCCTCAACGGTTGCAACCTCCTCGGCGGCAGCCAGCAGCCTGCAC AGCAGCAAGATCAGTACATTGTCTGAAGCATCTGTGGATTCCACTGCTCAAACTGGTCAT CCAGGCATAGGTGATTTGCAAGAGGAGTTATATCAAATGATTAAGAGTTTAAAGGACCAA TACTTTGTGGAATTGAATGAATTGTACAATAAGGTATCTATCAAGATACAACAGATTGAC AACCAAATGCCTGCTCAAAAGTCAGCAGAGCAGTATGAAAAGATGAAGGGCTTTAAAGGA ATGCTGGAGCGCACTTTGCATTTCCTGCAAGTTAACAAGAGCAACATTCATCCAGGTTTG AGGGAAAAAATCCCCATTTACGAGAGGCAAATTCTCAGTATCCTAAGTTCACAAAGAAGG AAACCTGTGCAGGCACCTGGGCAGCAAACGTTTCAGCAATCTAGTGGGCAAGCTCCTAGC TCTAACATTTCACAGCAACTTCAGACTTCCCAAGGTTTGCAGCAGCATGATAGTCATACT AGTCAGATGCCTCAAGCAAGTTTACCAAGTATGAACACAGGAGTACAAACCTCTGGAGCA CCTGCGCCTCAAGGAACAAACTTTGGTGTTCCAACAACACAGCAAAATGTCACAAATGCA CCACAGGCTGGCTCTAATTTGGAGAATGCTCAGGGAAATAATTTTAATCATGTGCAGCAT GGTTCAATGGGTGCTGCTTTGCAACAGGAAAGGACTGGTCCCATGCAGGGTGCATTGAAT GCACAGCAGCAGTCCAGTAGCAACATGATATCCAACAATGCAATGAGTACAATGCAGACT AATAACAATGCAAATGCGAATTCATTGCAGCAGTTAAAGCAGCAACGTCAGGAGCATCAA ATGATGCAAAGTCAGCAAATGAAGCAGCGCCAGCAGATGATGCAACAGATACAACAAAAG CAAACGCTTCAACCGCAGCTCCCAATACAGCAACTAAAGAAACAACAGCAGCAAGGGCAG ATGCAGTTTCCACAGCTTCATTCTGGAAATGATGTGAATGAGCTAAAGGTTAGGCAAGGA GCTGCAATCAAATCTGGAATGTATCAACAGCTGAGCCAGCGTAACTATTATCAGCAGATA AAACAGGGTGGTGTCTTTCCAATTTCTTCTCCGCAAACCCTCCAAACATCGTCCCCACAA ATTTCACACCATTCTCCTCAGGTTGATCAGCACAGTCTGTTGCAATCTCAAGTCAAAACC GGGACACCATTGCATTCAGCTAACTCACCATTTGTCCCATCTCCATCCCCTCCTGTGGCC CCATCACCGATGCCAATGGATTCGGATAAACCACTATCCAACTTATCTTCAGTTACTAGT GCTGGGCAGGCTGGACATCAGCAAACATCTCTTGCACCTCAAACACAATCTATAGCCGTT AACACACCAGGTATATCAGCGTCACCCTTGCTTGCAGAATTCACAAGTGCTGATGGAAGT CCGGCCAATGTACCAACTCAAGTTCCAGCCAAATCAAGCGCAGCAGAAAGGCCTCTGGAC CGTTTGCTTAAAGCATTGCGAACAACACAGCGTGAGTCCCTAAGTGCTGCAGTCAGCGAT ATTGGATCTGTCGTGAGTATGATTGACAGGATTGCTGGATCAGCGCCTGGTAATGGTTCT AGAGCTGCTGTAGGAGAAGATCTTGTCGCTATGACAAAGTGCCGCTTGCAAGCCAGGAAC TTCATAACTCATGACGGGAGTGGTGCATCAAAGAAAATGAAGCGGGACACGAGTGCTATG CCTCTTAATGTGTCATCAGCTGGAAGCGTGAATGATAGCTTGAAGCAATCATATGGTGTT GGTACTCCAGAGCTACAATCAACTGCAACCTCACGTGTCAAGTGGCAAAGGGCTGAGGTA AACCATGCTCTGATGGAGGAGATTCAGGAGATAAACCAACAGCTTATAGATACAGAGCTC CATGTCTCTGAGGATGATGCTGAGTCCTTCACTACATCTGAGGGGGGCAAAGGGACGGTC ATTAGATGCACATTCACTGCTGTTGCTGTTTGCCCCAGCTTGAAATCCGTGTTTGCGTCA GCGCAGATGAGTCCAATTTTGCCGTTGAGGTTGCTTGTTCCTGCTAGCTACCCGAAATGC TCCCCGGTGCTTCTAGACAAGTTTCCTGATGAACAATGCAGGAACTCAGACGACCTGTCT ACCAAGGCCAAGACAAAGTTCAGCGTATTGCTCCGGGGTCTAGCTGAGCCCATGTCACTG CGAGAAATCGCAAGGACATGGGATGCTTGCGCTCGCAAAGTGATCACAGAGTATGCCCAG CAAACCGGAGGAGGCAGTTTCAGCTCGAGCTATGGTTGCTGGGAAAGCTGCGTAGGCGCT TGTTAA

Peptide Sequence

PEP ID	Zm00001d049894_P029
PEP Infomation	pep chromosome:B73_RefGen_v4:4:51272227:51281194:1 gene:Zm00001d049894 transcript:Zm00001d049894_T029 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 15a
Sequence	MPSPCSSTVATSSAAASSLHSSKISTLSEASVDSTAQTGHPGIGDLQEELYQMIKSLKDQ YFVELNELYNKVSIKIQQIDNQMPAQKSAEQYEKMKGFKGMLERTLHFLQVNKSNIHPGL REKIPIYERQILSILSSQRRKPVQAPGQQTFQQSSGQAPSSNISQQLQTSQGLQQHDSHT SQMPQASLPSMNTGVQTSGAPAPQGTNFGVPTTQQNVTNAPQAGSNLENAQGNNFNHVQH GSMGAALQQERTGPMQGALNAQQQSSSNMISNNAMSTMQTNNNANANSLQQLKQQRQEHQ MMQSQQMKQRQQMMQQIQQKQTLQPQLPIQQLKKQQQQGQMQFPQLHSGNDVNELKVRQG AAIKSGMYQQLSQRNYYQQIKQGGVFPISSPQTLQTSSPQISHHSPQVDQHSLLQSQVKT GTPLHSANSPFVPSPSPPVAPSPMPMDSDKPLSNLSSVTSAGQAGHQQTSLAPQTQSIAV NTPGISASPLLAEFTSADGSPANVPTQVPAKSSAAERPLDRLLKALRTTQRESLSAAVSD IGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFITHDGSGASKKMKRDTSAM PLNVSSAGSVNDSLKQSYGVGTPELQSTATSRVKWQRAEVNHALMEEIQEINQQLIDTEL HVSEDDAESFTTSEGGKGTVIRCTFTAVAVCPSLKSVFASAQMSPILPLRLLVPASYPKC SPVLLDKFPDEQCRNSDDLSTKAKTKFSVLLRGLAEPMSLREIARTWDACARKVITEYAQ QTGGGSFSSSYGCWESCVGAC

Transcript Sequence

Transcript ID	Zm00001d049894_T029
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:51272227:51281194:1 gene:Zm00001d049894 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 15a
Sequence	ATGCCCTCTCCTTGTTCCTCAACGGTTGCAACCTCCTCGGCGGCAGCCAGCAGCCTGCAC AGCAGCAAGATCAGTACATTGTCTGAAGCATCTGTGGATTCCACTGCTCAAACTGGTCAT CCAGGCATAGGTGATTTGCAAGAGGAGTTATATCAAATGATTAAGAGTTTAAAGGACCAA TACTTTGTGGAATTGAATGAATTGTACAATAAGGTATCTATCAAGATACAACAGATTGAC AACCAAATGCCTGCTCAAAAGTCAGCAGAGCAGTATGAAAAGATGAAGGGCTTTAAAGGA ATGCTGGAGCGCACTTTGCATTTCCTGCAAGTTAACAAGAGCAACATTCATCCAGGTTTG AGGGAAAAAATCCCCATTTACGAGAGGCAAATTCTCAGTATCCTAAGTTCACAAAGAAGG AAACCTGTGCAGGCACCTGGGCAGCAAACGTTTCAGCAATCTAGTGGGCAAGCTCCTAGC TCTAACATTTCACAGCAACTTCAGACTTCCCAAGGTTTGCAGCAGCATGATAGTCATACT AGTCAGATGCCTCAAGCAAGTTTACCAAGTATGAACACAGGAGTACAAACCTCTGGAGCA CCTGCGCCTCAAGGAACAAACTTTGGTGTTCCAACAACACAGCAAAATGTCACAAATGCA CCACAGGCTGGCTCTAATTTGGAGAATGCTCAGGGAAATAATTTTAATCATGTGCAGCAT GGTTCAATGGGTGCTGCTTTGCAACAGGAAAGGACTGGTCCCATGCAGGGTGCATTGAAT GCACAGCAGCAGTCCAGTAGCAACATGATATCCAACAATGCAATGAGTACAATGCAGACT AATAACAATGCAAATGCGAATTCATTGCAGCAGTTAAAGCAGCAACGTCAGGAGCATCAA ATGATGCAAAGTCAGCAAATGAAGCAGCGCCAGCAGATGATGCAACAGATACAACAAAAG CAAACGCTTCAACCGCAGCTCCCAATACAGCAACTAAAGAAACAACAGCAGCAAGGGCAG ATGCAGTTTCCACAGCTTCATTCTGGAAATGATGTGAATGAGCTAAAGGTTAGGCAAGGA GCTGCAATCAAATCTGGAATGTATCAACAGCTGAGCCAGCGTAACTATTATCAGCAGATA AAACAGGGTGGTGTCTTTCCAATTTCTTCTCCGCAAACCCTCCAAACATCGTCCCCACAA ATTTCACACCATTCTCCTCAGGTTGATCAGCACAGTCTGTTGCAATCTCAAGTCAAAACC GGGACACCATTGCATTCAGCTAACTCACCATTTGTCCCATCTCCATCCCCTCCTGTGGCC CCATCACCGATGCCAATGGATTCGGATAAACCACTATCCAACTTATCTTCAGTTACTAGT GCTGGGCAGGCTGGACATCAGCAAACATCTCTTGCACCTCAAACACAATCTATAGCCGTT AACACACCAGGTATATCAGCGTCACCCTTGCTTGCAGAATTCACAAGTGCTGATGGAAGT CCGGCCAATGTACCAACTCAAGTTCCAGCCAAATCAAGCGCAGCAGAAAGGCCTCTGGAC CGTTTGCTTAAAGCATTGCGAACAACACAGCGTGAGTCCCTAAGTGCTGCAGTCAGCGAT ATTGGATCTGTCGTGAGTATGATTGACAGGATTGCTGGATCAGCGCCTGGTAATGGTTCT AGAGCTGCTGTAGGAGAAGATCTTGTCGCTATGACAAAGTGCCGCTTGCAAGCCAGGAAC TTCATAACTCATGACGGGAGTGGTGCATCAAAGAAAATGAAGCGGGACACGAGTGCTATG CCTCTTAATGTGTCATCAGCTGGAAGCGTGAATGATAGCTTGAAGCAATCATATGGTGTT GGTACTCCAGAGCTACAATCAACTGCAACCTCACGTGTCAAGTGGCAAAGGGCTGAGGTA AACCATGCTCTGATGGAGGAGATTCAGGAGATAAACCAACAGCTTATAGATACAGAGCTC CATGTCTCTGAGGATGATGCTGAGTCCTTCACTACATCTGAGGGGGGCAAAGGGACGGTC ATTAGATGCACATTCACTGCTGTTGCTGTTTGCCCCAGCTTGAAATCCGTGTTTGCGTCA GCGCAGATGAGTCCAATTTTGCCGTTGAGGTTGCTTGTTCCTGCTAGCTACCCGAAATGC TCCCCGGTGCTTCTAGACAAGTTTCCTGATGAACAATGCAGGAACTCAGACGACCTGTCT ACCAAGGCCAAGACAAAGTTCAGCGTATTGCTCCGGGGTCTAGCTGAGCCCATGTCACTG CGAGAAATCGCAAGGACATGGGATGCTTGCGCTCGCAAAGTGATCACAGAGTATGCCCAG CAAACCGGAGGAGGCAGTTTCAGCTCGAGCTATGGTTGCTGGGAAAGCTGCGTAGGCGCT TGTTAATTGCTTATATTGTATCTATTATTATTATTATAAGTATTTATGTGTCGAGTAAAA TAGAAAAAAAAACAGTGTGTCTGCTGTATACTCCATCCTTTTGCTATTGGGTCAATGTTG GCTTGATAAATATGGTCGTGTACAGTACAGTGTATGCGTCAGTCCGGTTAGTATCATGTA TGCTTTGCCTCTATTTACAGAACTTGGTTTTATAACTTTTTTTCGTCACCTTTTATATCT AAATATTTTTTAATAGTCTTTTTTTTTCCATTGATTATAATGTATGCCGTTCCTTCCCAC