Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049824_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:4:46625882:46630722:-1 gene:Zm00001d049824 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:neighbor of tga1 description: neighbor of tga1
Sequence	ATGGATTGGGATCTCAAGGCGGTGGGCGCGTGGGACCTCGCGGAGCTGGAGCAGGACCAC GCGGCCGCCACGGCAGCAGCGGGGCCGTCCGAGGGCCACGCCACCGATACTGCCGCGGCG GGCACGGGCACGGGGACGGGGACGGAGAGCCGCCCGCCCGGAGCAGGGGCACCCGCCGAG TGCTCTGTGGACTTGAAGCTGGGCGGGATGGGCGAGTGCGAGCTCGGCGCGGGCGCGGCG ACGGCCTGCAGGGAGAGGGAGGCCGCGGCGGGGGCGACGAAGCGGCCGCGCCCCGCCGGG CAGCAGCAGCAGCAGTGCCCGTCGTGCGCGGTGGATGGGTGCAGAGCGGACCTGAGCAAG TGCCGCGACTACCACCGGCGGCACAAGGTGTGCGAGGCGCACTCCAAGACCCCCGTCGTC GTCGTGGCCGGCCGCGAGATGCGCTTCTGCCAGCAGTGCAGCAGATTCCATTTACTTGCG GAGTTCGACGCCGACAAGCGCAGCTGCAGAAAGCGTCTGGACGGCCATAATCGCCGCCGC AGGAAGCCACAGCCAGACACCATGGCTTCTGCTAGCTCTATCACAAGCCAGCAAGGCACA CGATTCTCACCATTTGCGCCTCCAAGACTGGAGGCGAGCTGGCCGGGGGTGATGAAAACC GAGGAGAGTCCATATCGCATCACTCACCAAATCCATCTGGGCTCCAGCAGCAGCAGCAGG CAGCAGCATTTCGTGGGAGCCGCCACGTCTGCCTACGCCAAAGAAGGCCCGCGCTTCCCT TTCCTGCAGGAGGGCGAGATAAGCTTCGCCACCGGCGTGGTGTTGGAGCCGCCGGCGGCG GCTCCAGCGTGCCAGCCGCTCCTCAAGTCGGGAGCACCACCACCCGAGAGCAGCAGCGCC GGCGGCGGGAAGATGTTCTCCGATCAGGGGCTGACTCGCGTGCTCGACTCGGACTGTGCT CTCTCTCTTCTGTCAGCGCCGGCCAACTACTCCGGCATCGACGTCAGCAGGATGGTCCGC CCGACTGAACACGTCCCCATGGCCCAGCAGCTCGTGGTCTCGGGCCTGCAGTTCGGCAGC GCGTCGTGGTTCCCGCGCCCCCAGGCTTCCACGGGCGGCTCCTTCGTCTCATCCTGCCCC GCCGTGCAGGTGGAGGGCGAGCAGCAGCTGAACGCCGTGCTGGGCCCCAACGACAGCGAG GTGAGCATGAACTACGGCGGGATGTTCCACGTCGGCGGCGGCAGCGGCGGCGGCGAGGGC TCCTCGGACGGCGGCACCTCGTCGTCGATGCCCTTCTCGTGGCAGTAG

Peptide Sequence

PEP ID	Zm00001d049824_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:4:46625882:46630722:-1 gene:Zm00001d049824 transcript:Zm00001d049824_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:neighbor of tga1 description: neighbor of tga1
Sequence	MDWDLKAVGAWDLAELEQDHAAATAAAGPSEGHATDTAAAGTGTGTGTESRPPGAGAPAE CSVDLKLGGMGECELGAGAATACREREAAAGATKRPRPAGQQQQQCPSCAVDGCRADLSK CRDYHRRHKVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRR RKPQPDTMASASSITSQQGTRFSPFAPPRLEASWPGVMKTEESPYRITHQIHLGSSSSSR QQHFVGAATSAYAKEGPRFPFLQEGEISFATGVVLEPPAAAPACQPLLKSGAPPPESSSA GGGKMFSDQGLTRVLDSDCALSLLSAPANYSGIDVSRMVRPTEHVPMAQQLVVSGLQFGS ASWFPRPQASTGGSFVSSCPAVQVEGEQQLNAVLGPNDSEVSMNYGGMFHVGGGSGGGEG SSDGGTSSSMPFSWQ

Transcript Sequence

Transcript ID	Zm00001d049824_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:46625882:46630722:-1 gene:Zm00001d049824 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:neighbor of tga1 description: neighbor of tga1
Sequence	ATTCCTCCTCCTCCGAAGCAGCAGGCAGCAGCTGCATCGCACCTCACACCTCTCGTGTCC ATCGATCCAGCCGCCCGCCGCAGCTGCAGCTCTCACTGTTGCTGTGCCACCTCCTCGTCG CCTGTAGTGTCGACAGAGAAACGCCCGCTGAATGAGAGGGAAGGAACGGAAGCTGCAGCG GGCGCGCGAGTGCAAGGACTAGGACTAGCGGTTGCAACGTCGGCGCGCGCGCGCGTGCGG CGTACGTCGGGCATGGATTGGGATCTCAAGGCGGTGGGCGCGTGGGACCTCGCGGAGCTG GAGCAGGACCACGCGGCCGCCACGGCAGCAGCGGGGCCGTCCGAGGGCCACGCCACCGAT ACTGCCGCGGCGGGCACGGGCACGGGGACGGGGACGGAGAGCCGCCCGCCCGGAGCAGGG GCACCCGCCGAGTGCTCTGTGGACTTGAAGCTGGGCGGGATGGGCGAGTGCGAGCTCGGC GCGGGCGCGGCGACGGCCTGCAGGGAGAGGGAGGCCGCGGCGGGGGCGACGAAGCGGCCG CGCCCCGCCGGGCAGCAGCAGCAGCAGTGCCCGTCGTGCGCGGTGGATGGGTGCAGAGCG GACCTGAGCAAGTGCCGCGACTACCACCGGCGGCACAAGGTGTGCGAGGCGCACTCCAAG ACCCCCGTCGTCGTCGTGGCCGGCCGCGAGATGCGCTTCTGCCAGCAGTGCAGCAGATTC CATTTACTTGCGGAGTTCGACGCCGACAAGCGCAGCTGCAGAAAGCGTCTGGACGGCCAT AATCGCCGCCGCAGGAAGCCACAGCCAGACACCATGGCTTCTGCTAGCTCTATCACAAGC CAGCAAGGCACACGATTCTCACCATTTGCGCCTCCAAGACTGGAGGCGAGCTGGCCGGGG GTGATGAAAACCGAGGAGAGTCCATATCGCATCACTCACCAAATCCATCTGGGCTCCAGC AGCAGCAGCAGGCAGCAGCATTTCGTGGGAGCCGCCACGTCTGCCTACGCCAAAGAAGGC CCGCGCTTCCCTTTCCTGCAGGAGGGCGAGATAAGCTTCGCCACCGGCGTGGTGTTGGAG CCGCCGGCGGCGGCTCCAGCGTGCCAGCCGCTCCTCAAGTCGGGAGCACCACCACCCGAG AGCAGCAGCGCCGGCGGCGGGAAGATGTTCTCCGATCAGGGGCTGACTCGCGTGCTCGAC TCGGACTGTGCTCTCTCTCTTCTGTCAGCGCCGGCCAACTACTCCGGCATCGACGTCAGC AGGATGGTCCGCCCGACTGAACACGTCCCCATGGCCCAGCAGCTCGTGGTCTCGGGCCTG CAGTTCGGCAGCGCGTCGTGGTTCCCGCGCCCCCAGGCTTCCACGGGCGGCTCCTTCGTC TCATCCTGCCCCGCCGTGCAGGTGGAGGGCGAGCAGCAGCTGAACGCCGTGCTGGGCCCC AACGACAGCGAGGTGAGCATGAACTACGGCGGGATGTTCCACGTCGGCGGCGGCAGCGGC GGCGGCGAGGGCTCCTCGGACGGCGGCACCTCGTCGTCGATGCCCTTCTCGTGGCAGTAG TCGTCGTCACTTGTCAGCAGCCGCTGCGTTCTCTCATCTTTCGCGCTTCAGACGATCTGG TAGGGAGATACTGGCTTTAGTGATCACTGATCAGCATTGATCCCCCCCCCCCCCCCCCCA CTTTTTGTCGAATCGGCTCTGCTAGCCAGCATTATTGTGGACATTTTTTGAATCGTCTCT AGAATAGTCGCCGATGCGTGCCTTAGCAGCGCACAGACATTGTTAGTTTGGTCGCAACGA TCAATGGCATGTTTGCTCACTT