Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049800_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:45047883:45048929:-1 gene:Zm00001d049800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BBR/BPC-transcription factor 3 description:Protein BASIC PENTACYSTEINE1
Sequence	ATGGACGACGACGACGGCAGCCTGGGCATTCGGAACTGGGGCTTCTATGACACCGTGAAA GGCAGCCTCGGCCTGCAGCTCATGTCGCCCATGCCACCTGATCGGGACACGAAGCCACTG CTCCCGAGAGCTGGTTTCTTGCAGCAGCATGGGCATCACAATGCCCCACACCAGCTCCAC GCACAGCAGCCGCAGCATTACCGTGACTCCGCTGGTGGCGGAGTCTCTGGTGGCACACCT GCCGAGCAGCACCCTATCCACATGGACTTCTCGCGCAATGAAGCTTGGCTGCACCCATCA CACCACCAGCATCCCCATGAACAGAAGGTCCTTCATTCTCGCCCTATCGGACCAGCTGGG CATGTTGGGCATCCAGGCCATGTTGCCCATCCTGTGCATGCCGTGCATGTTGTGCATCAC CATCCTACTGGCTATGGGATGATATCAGATGCACAACATACTCTTCAGATGATGCAACCA CAGCTTGAGTCACAGCTTCAGGAGCCTCCTCCTTGCAAGGAAGACGAAGCACCACCTCCA CTGGTTGAGGATCACTCCGTGGTTAGTACCGGGCCACCCGTGAAGAAGAGGCAGCGGGGC CAGAAGCAGAGCTGTCAGCCTAAGTCACCAAAGCCTAAGAAGCCTAAGAAGTCTGCTGTC CCACCGGAGGGTGGGACAATTAATGGGCACGCGACCCGGAGGAGGGGACCTAAGAAGAAT GTGGGGATGATGATTAACGGTATTGAGTTGGACCTTGCCAACATACCAACACCAGTGTGC TCGTGCACCGGAGCTCCCCAGCAGTGCTACCGGTGGGGTGCAGGTGGGTGGCAGTCTGCA TGCTGCACGACTTCTATTTCAACGTATCCACTGCCAATGAACACAAAGCGCCGGGGCGCA CGTATTGCTGGAAGGAAGATGAGCCAAGGTGCATTCAAAAAGGTGCTTGAGAAGCTTGCT GGTGAAGGGTACAATCTTGTTAATCCAATTGACTTGAAGACGTTTTGGGCTAAGCATGGT ACAAATAAGTTTGTAACGATCAGATAA

Peptide Sequence

PEP ID	Zm00001d049800_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:45047883:45048929:-1 gene:Zm00001d049800 transcript:Zm00001d049800_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BBR/BPC-transcription factor 3 description:Protein BASIC PENTACYSTEINE1
Sequence	MDDDDGSLGIRNWGFYDTVKGSLGLQLMSPMPPDRDTKPLLPRAGFLQQHGHHNAPHQLH AQQPQHYRDSAGGGVSGGTPAEQHPIHMDFSRNEAWLHPSHHQHPHEQKVLHSRPIGPAG HVGHPGHVAHPVHAVHVVHHHPTGYGMISDAQHTLQMMQPQLESQLQEPPPCKEDEAPPP LVEDHSVVSTGPPVKKRQRGQKQSCQPKSPKPKKPKKSAVPPEGGTINGHATRRRGPKKN VGMMINGIELDLANIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMNTKRRGA RIAGRKMSQGAFKKVLEKLAGEGYNLVNPIDLKTFWAKHGTNKFVTIR

Transcript Sequence

Transcript ID	Zm00001d049800_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:45047883:45048929:-1 gene:Zm00001d049800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BBR/BPC-transcription factor 3 description:Protein BASIC PENTACYSTEINE1
Sequence	ATGGACGACGACGACGGCAGCCTGGGCATTCGGAACTGGGGCTTCTATGACACCGTGAAA GGCAGCCTCGGCCTGCAGCTCATGTCGCCCATGCCACCTGATCGGGACACGAAGCCACTG CTCCCGAGAGCTGGTTTCTTGCAGCAGCATGGGCATCACAATGCCCCACACCAGCTCCAC GCACAGCAGCCGCAGCATTACCGTGACTCCGCTGGTGGCGGAGTCTCTGGTGGCACACCT GCCGAGCAGCACCCTATCCACATGGACTTCTCGCGCAATGAAGCTTGGCTGCACCCATCA CACCACCAGCATCCCCATGAACAGAAGGTCCTTCATTCTCGCCCTATCGGACCAGCTGGG CATGTTGGGCATCCAGGCCATGTTGCCCATCCTGTGCATGCCGTGCATGTTGTGCATCAC CATCCTACTGGCTATGGGATGATATCAGATGCACAACATACTCTTCAGATGATGCAACCA CAGCTTGAGTCACAGCTTCAGGAGCCTCCTCCTTGCAAGGAAGACGAAGCACCACCTCCA CTGGTTGAGGATCACTCCGTGGTTAGTACCGGGCCACCCGTGAAGAAGAGGCAGCGGGGC CAGAAGCAGAGCTGTCAGCCTAAGTCACCAAAGCCTAAGAAGCCTAAGAAGTCTGCTGTC CCACCGGAGGGTGGGACAATTAATGGGCACGCGACCCGGAGGAGGGGACCTAAGAAGAAT GTGGGGATGATGATTAACGGTATTGAGTTGGACCTTGCCAACATACCAACACCAGTGTGC TCGTGCACCGGAGCTCCCCAGCAGTGCTACCGGTGGGGTGCAGGTGGGTGGCAGTCTGCA TGCTGCACGACTTCTATTTCAACGTATCCACTGCCAATGAACACAAAGCGCCGGGGCGCA CGTATTGCTGGAAGGAAGATGAGCCAAGGTGCATTCAAAAAGGTGCTTGAGAAGCTTGCT GGTGAAGGGTACAATCTTGTTAATCCAATTGACTTGAAGACGTTTTGGGCTAAGCATGGT ACAAATAAGTTTGTAACGATCAGATAA