Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049785_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:4:44633576:44640151:1 gene:Zm00001d049785 gene_biotype:protein_coding transcript_biotype:protein_coding description:Type II inositol polyphosphate 5-phosphatase 15
Sequence	ATGGACCCGGACGACGAACCAGCGGCGCAGCGGAAAGCCGTCGACTTGCACCTGCCGCGC GACACGGAGCCTGCCTCCTCGCCCGCGTGCACCCGCCGCGCCGCGCCGCGCGTGCTCAGC TACTGTGACGTCCCTTTCGCCTCCGCCTCGGCGCAGCGCTGCGCATCATTCCCGCAGCGC CACGGAGAGCTGGCGCACGCCCGCTCGGCCTCCTTCGCAGCCTGGATCGAAGGCGGCTCG GCGTCGGCGCCGGCGGCGGCACTCGAGCGGGCCATGTCGCAGTACGGCGGTGCGGACGGC GCGCTGCCAGAGTTCGTCGGCGCCGGCGGTGGCGAGGGCATCTTCCGCGTGCCGCTCCGC GCGGCGATGCACCCGGCGCGCCCGCCGCCGCTCGAGGTGCGGCCCCACCCGCTGCGGGAG ACACAGGCGGGCGCCTTTCTGAGGACGCTGGCCTGCGACCCGCGGCGACGGCAGCTGTGG GCGGGCGCCGAGTCCGGGGTTCGAGTGTGGGGCCTCCACGAGGTGTTCCGTGGGTGGTGG CCGGGCGCCGGGCCGCGGCGCCGCGGTGACGAGGAGGCCGCGCCGTTCAGAGAGTCCGTG CCGGTCCCGCCCGCGCTCTGCGCCGCTGTCGACGGCGCTAACGGGATGGTGTGGACGGGG CACAGGGACGGCAGGATCAGGGCGTGGCGCATGGACCACGCCGCGCCCGCCGGAGGATAC TCCGCCGGCAGTGCGCCCATGTTCAAGGAGGCCCTCTCGTGGCAGGCGTACAGTCGCACG CCGGTGCTCGCCATCGTCGTCACGTTGTACGGTGAAATTTGGTCCGGATCAGAAGGCGGT GCCATAAAGGCATGGCCTTGGGACACCATTGCTAAGTCCCTCTCATTTACATCAGGAGAA CGTCATAACGCTGCCTCGCTGGTTGAAAAATCTTATATTGACCTTAGAAACCATGCTACA ATTGGTAACATGTGCTCATTGCCTGCTGCTGATGTGAAACACATGCTCGCAGACAACTGC CGAGCGAAAATTTGGAGTCTAACTAGCATGACATTTGCTCTTTGGGATGCTAAGACTAGG GAACTTTTAAAAGTATTTGGCATCGATGGACAAGTCGACTTAGCTCGTCCTGAGGCCCCA GTAATGCCCGAACAATTCATAGAGGAAGAGATTAAAGTAAAACCCACAAAAAGGGAGAGG CCGCAAGGTTCTTTCACATTTTTTCAGAAATCTAGGAATGCCTTGATGGGCGCAGCTGAT GCTGTACGCAGAGTTGCAACAAAAGGGACATTTGTCGAAGATAATCGGCGAACTGAAGCA GTGGCTCAAGCAATGAATGGGACAATTTGGTCTGGTTGCACAGATGGTTCAATTATTGTT TGGGATGGAAATGGGAATAGACTGCGAGAATTTCATTACCATAGTTCTTCTGTTCGATGC ATAAAGACACTCGGAGACAAGGTTTGGGTGGGCTATGCAAGTGGCACTATTCAAGTTGTC GATGTCGAAGGTAACCTTCAGGCAGGATGGATTGGTCATAGCTGCCCAGTCATAGACATG GCAATTAGTGATTCTTACATTTTTTCTTTGGCACATCATGGTGGTATTCGAGGATGGCCT CTAAGTTCCCCTAGCTCCCTAGATGATATTCTATGCTATGAGTTGGCTAGCAGGGAACTG TTATACACAAGGCTAGAGAACCTTAAAATACTGGTTGGGACTTGGAATGTTGCACAAGAG AAAGCTTCTCCTGAAGCACTAAGGTCATGGTTGGGTGGTGCATTTTTTGATGTTGGGCTG GTGGTGGTTGGTTTGCAAGAGGTCGAGATGGGTGCTGGAGTTCTTGCCATGGCAGCTGCC AAAGAAAGTGTAGGGCTTGAAGGCAGTGCCAATGGGCAGTGGTGGATAGACAGTATTGGC AAAACACTTGATGAGGGAATATCCTTCCACAGAGTTGGTTCAAGGCAGTTGGCAGGACTA CTTATTGCTGCATGGGCAACGAATGACCTTAGGCCACATGTTGGTGATGTTGATACTGCT GCAGTGCCATGTGGCTTTGGGCGTGCTATTGGCAACAAGGGTGGCGTCGGATTAAGAATA AGAGTCTTTGGTCGCAGGATATGTTTTGTAAACAATCATTTTGCTGCACATCAAGAGAAT GTTAGCCGCCGCAATGCTGATTTTGACCGCATTTATCGGACAATGACTTTCACCAAACCT CAGGGATCTGCAGCTTCTGCTACAGCTGTCCAATTGCATAAAGCAGCTAATGAAAATCAA GCAGATGAAGGTAGGCCTGATCTGGCAGAAGCTGATATGGTTATCTTCCTTGGTGATTTG AACTACCGACTTGATGGCATCACCTATGATGAAGCAAGGGACATGGTCTCCCAGAGGAGC TTTGACTGGCTTAGAGAAAGGGATCAACTTCGAGCGGAAATGAAGGCGGGAAATGTGTTT CAGGGAATGCGTGAAGGCCCAATCAGATTTCCTCCAACCTACAAGTTCCAGAGACACCAG TCGGGTCTCTCAGGGTATGATTCAGGCGAGAAGAAGAGAATACCTGCTTGGTGCGACAGG ATACTGTATCGAGATAGCCGTCCTGTACCAATAGCTGAATGCTCATTAGAGTGCCCTGTC GTCGCTGCAATCACAGCGTACGAATCTTGCATGGATGTCACAGACAGTGACCATAAACCC GTGAGATGTACATTCAGCGTCGATATTGCAAGAGTAGACGAGCTGATAAGGAGGCAAGAG TTTGGAAAAATAATCGAATCTAACAAAAAGGTTCGCTCTTTGCTTCGAGAGCTCCGTTCT GTTCCGGACACCGTCGTCAACGCGAACAACATTACATTGGAAAATCACCAAGAAGATGTC ATCCTCCGGATAACTAATAACTGTGAAACCAGCAAGGCCGCTTTTGAAATCCTGTGTGAA GGCCAGACAGTCAGAAAGCAGGGCGGAACCCAATCTGAGGAGCTGCTCCCAAGGGCGTCC TTTGGCTTCCCACTTTGGCTTGAGGTCCAACCATCGATGGGTCTCATCGGCCCAGGAGAA ACAGCGGAAGTCGTCGTGCGCCACGACGACTTCCTGACGCAGGAAGAGTACGTCGACGGA GCACAGCGGAACCGGTGGCGCGAGGCCACCCGAGACCTGGAGGTCGTGCTCTCGGTGACA GTCACGGGCAGCTCCAGCTCCTCGGCCGAGGCCGTCGCGCACAGGGTCACCGTCCGGCAC TGCTGCCCGGCGCCTCCGGCTCCCCTGCCCGCCAACCGGCGCTCTGCCGCTGCCTCGCCT CGTGACGACGTTGCCGCGTCGGATAACCAGTCGAACCACCTGCACCGTTCCGATCTCGCC AGCTTCGGTAGCTCGGAGGTGCGTGACCTGTGCGGGGGCTTGTGA

Peptide Sequence

PEP ID	Zm00001d049785_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:4:44633576:44640151:1 gene:Zm00001d049785 transcript:Zm00001d049785_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Type II inositol polyphosphate 5-phosphatase 15
Sequence	MDPDDEPAAQRKAVDLHLPRDTEPASSPACTRRAAPRVLSYCDVPFASASAQRCASFPQR HGELAHARSASFAAWIEGGSASAPAAALERAMSQYGGADGALPEFVGAGGGEGIFRVPLR AAMHPARPPPLEVRPHPLRETQAGAFLRTLACDPRRRQLWAGAESGVRVWGLHEVFRGWW PGAGPRRRGDEEAAPFRESVPVPPALCAAVDGANGMVWTGHRDGRIRAWRMDHAAPAGGY SAGSAPMFKEALSWQAYSRTPVLAIVVTLYGEIWSGSEGGAIKAWPWDTIAKSLSFTSGE RHNAASLVEKSYIDLRNHATIGNMCSLPAADVKHMLADNCRAKIWSLTSMTFALWDAKTR ELLKVFGIDGQVDLARPEAPVMPEQFIEEEIKVKPTKRERPQGSFTFFQKSRNALMGAAD AVRRVATKGTFVEDNRRTEAVAQAMNGTIWSGCTDGSIIVWDGNGNRLREFHYHSSSVRC IKTLGDKVWVGYASGTIQVVDVEGNLQAGWIGHSCPVIDMAISDSYIFSLAHHGGIRGWP LSSPSSLDDILCYELASRELLYTRLENLKILVGTWNVAQEKASPEALRSWLGGAFFDVGL VVVGLQEVEMGAGVLAMAAAKESVGLEGSANGQWWIDSIGKTLDEGISFHRVGSRQLAGL LIAAWATNDLRPHVGDVDTAAVPCGFGRAIGNKGGVGLRIRVFGRRICFVNNHFAAHQEN VSRRNADFDRIYRTMTFTKPQGSAASATAVQLHKAANENQADEGRPDLAEADMVIFLGDL NYRLDGITYDEARDMVSQRSFDWLRERDQLRAEMKAGNVFQGMREGPIRFPPTYKFQRHQ SGLSGYDSGEKKRIPAWCDRILYRDSRPVPIAECSLECPVVAAITAYESCMDVTDSDHKP VRCTFSVDIARVDELIRRQEFGKIIESNKKVRSLLRELRSVPDTVVNANNITLENHQEDV ILRITNNCETSKAAFEILCEGQTVRKQGGTQSEELLPRASFGFPLWLEVQPSMGLIGPGE TAEVVVRHDDFLTQEEYVDGAQRNRWREATRDLEVVLSVTVTGSSSSSAEAVAHRVTVRH CCPAPPAPLPANRRSAAASPRDDVAASDNQSNHLHRSDLASFGSSEVRDLCGGL

Transcript Sequence

Transcript ID	Zm00001d049785_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:44633576:44640151:1 gene:Zm00001d049785 gene_biotype:protein_coding transcript_biotype:protein_coding description:Type II inositol polyphosphate 5-phosphatase 15
Sequence	AACTCACAAGAGTTGTCTGTTGCCTCACCACCCCTCTGTCCCTGCTTCCTTCTGCTCCCG CAACGGGTGGCCTCCGTTCCCCGACCCCGCCCGACTCTCCCACACATCTCCGGCGCTCTC TTCGAGTCCTCCTGCAGTCCCGCCGCCTTCTCATCGCTACCAAAATTGCAAAGCCGGACT GGAACTCGCGTCGCGCGCAGGGGCATGGACCCGGACGACGAACCAGCGGCGCAGCGGAAA GCCGTCGACTTGCACCTGCCGCGCGACACGGAGCCTGCCTCCTCGCCCGCGTGCACCCGC CGCGCCGCGCCGCGCGTGCTCAGCTACTGTGACGTCCCTTTCGCCTCCGCCTCGGCGCAG CGCTGCGCATCATTCCCGCAGCGCCACGGAGAGCTGGCGCACGCCCGCTCGGCCTCCTTC GCAGCCTGGATCGAAGGCGGCTCGGCGTCGGCGCCGGCGGCGGCACTCGAGCGGGCCATG TCGCAGTACGGCGGTGCGGACGGCGCGCTGCCAGAGTTCGTCGGCGCCGGCGGTGGCGAG GGCATCTTCCGCGTGCCGCTCCGCGCGGCGATGCACCCGGCGCGCCCGCCGCCGCTCGAG GTGCGGCCCCACCCGCTGCGGGAGACACAGGCGGGCGCCTTTCTGAGGACGCTGGCCTGC GACCCGCGGCGACGGCAGCTGTGGGCGGGCGCCGAGTCCGGGGTTCGAGTGTGGGGCCTC CACGAGGTGTTCCGTGGGTGGTGGCCGGGCGCCGGGCCGCGGCGCCGCGGTGACGAGGAG GCCGCGCCGTTCAGAGAGTCCGTGCCGGTCCCGCCCGCGCTCTGCGCCGCTGTCGACGGC GCTAACGGGATGGTGTGGACGGGGCACAGGGACGGCAGGATCAGGGCGTGGCGCATGGAC CACGCCGCGCCCGCCGGAGGATACTCCGCCGGCAGTGCGCCCATGTTCAAGGAGGCCCTC TCGTGGCAGGCGTACAGTCGCACGCCGGTGCTCGCCATCGTCGTCACGTTGTACGGTGAA ATTTGGTCCGGATCAGAAGGCGGTGCCATAAAGGCATGGCCTTGGGACACCATTGCTAAG TCCCTCTCATTTACATCAGGAGAACGTCATAACGCTGCCTCGCTGGTTGAAAAATCTTAT ATTGACCTTAGAAACCATGCTACAATTGGTAACATGTGCTCATTGCCTGCTGCTGATGTG AAACACATGCTCGCAGACAACTGCCGAGCGAAAATTTGGAGTCTAACTAGCATGACATTT GCTCTTTGGGATGCTAAGACTAGGGAACTTTTAAAAGTATTTGGCATCGATGGACAAGTC GACTTAGCTCGTCCTGAGGCCCCAGTAATGCCCGAACAATTCATAGAGGAAGAGATTAAA GTAAAACCCACAAAAAGGGAGAGGCCGCAAGGTTCTTTCACATTTTTTCAGAAATCTAGG AATGCCTTGATGGGCGCAGCTGATGCTGTACGCAGAGTTGCAACAAAAGGGACATTTGTC GAAGATAATCGGCGAACTGAAGCAGTGGCTCAAGCAATGAATGGGACAATTTGGTCTGGT TGCACAGATGGTTCAATTATTGTTTGGGATGGAAATGGGAATAGACTGCGAGAATTTCAT TACCATAGTTCTTCTGTTCGATGCATAAAGACACTCGGAGACAAGGTTTGGGTGGGCTAT GCAAGTGGCACTATTCAAGTTGTCGATGTCGAAGGTAACCTTCAGGCAGGATGGATTGGT CATAGCTGCCCAGTCATAGACATGGCAATTAGTGATTCTTACATTTTTTCTTTGGCACAT CATGGTGGTATTCGAGGATGGCCTCTAAGTTCCCCTAGCTCCCTAGATGATATTCTATGC TATGAGTTGGCTAGCAGGGAACTGTTATACACAAGGCTAGAGAACCTTAAAATACTGGTT GGGACTTGGAATGTTGCACAAGAGAAAGCTTCTCCTGAAGCACTAAGGTCATGGTTGGGT GGTGCATTTTTTGATGTTGGGCTGGTGGTGGTTGGTTTGCAAGAGGTCGAGATGGGTGCT GGAGTTCTTGCCATGGCAGCTGCCAAAGAAAGTGTAGGGCTTGAAGGCAGTGCCAATGGG CAGTGGTGGATAGACAGTATTGGCAAAACACTTGATGAGGGAATATCCTTCCACAGAGTT GGTTCAAGGCAGTTGGCAGGACTACTTATTGCTGCATGGGCAACGAATGACCTTAGGCCA CATGTTGGTGATGTTGATACTGCTGCAGTGCCATGTGGCTTTGGGCGTGCTATTGGCAAC AAGGGTGGCGTCGGATTAAGAATAAGAGTCTTTGGTCGCAGGATATGTTTTGTAAACAAT CATTTTGCTGCACATCAAGAGAATGTTAGCCGCCGCAATGCTGATTTTGACCGCATTTAT CGGACAATGACTTTCACCAAACCTCAGGGATCTGCAGCTTCTGCTACAGCTGTCCAATTG CATAAAGCAGCTAATGAAAATCAAGCAGATGAAGGTAGGCCTGATCTGGCAGAAGCTGAT ATGGTTATCTTCCTTGGTGATTTGAACTACCGACTTGATGGCATCACCTATGATGAAGCA AGGGACATGGTCTCCCAGAGGAGCTTTGACTGGCTTAGAGAAAGGGATCAACTTCGAGCG GAAATGAAGGCGGGAAATGTGTTTCAGGGAATGCGTGAAGGCCCAATCAGATTTCCTCCA ACCTACAAGTTCCAGAGACACCAGTCGGGTCTCTCAGGGTATGATTCAGGCGAGAAGAAG AGAATACCTGCTTGGTGCGACAGGATACTGTATCGAGATAGCCGTCCTGTACCAATAGCT GAATGCTCATTAGAGTGCCCTGTCGTCGCTGCAATCACAGCGTACGAATCTTGCATGGAT GTCACAGACAGTGACCATAAACCCGTGAGATGTACATTCAGCGTCGATATTGCAAGAGTA GACGAGCTGATAAGGAGGCAAGAGTTTGGAAAAATAATCGAATCTAACAAAAAGGTTCGC TCTTTGCTTCGAGAGCTCCGTTCTGTTCCGGACACCGTCGTCAACGCGAACAACATTACA TTGGAAAATCACCAAGAAGATGTCATCCTCCGGATAACTAATAACTGTGAAACCAGCAAG GCCGCTTTTGAAATCCTGTGTGAAGGCCAGACAGTCAGAAAGCAGGGCGGAACCCAATCT GAGGAGCTGCTCCCAAGGGCGTCCTTTGGCTTCCCACTTTGGCTTGAGGTCCAACCATCG ATGGGTCTCATCGGCCCAGGAGAAACAGCGGAAGTCGTCGTGCGCCACGACGACTTCCTG ACGCAGGAAGAGTACGTCGACGGAGCACAGCGGAACCGGTGGCGCGAGGCCACCCGAGAC CTGGAGGTCGTGCTCTCGGTGACAGTCACGGGCAGCTCCAGCTCCTCGGCCGAGGCCGTC GCGCACAGGGTCACCGTCCGGCACTGCTGCCCGGCGCCTCCGGCTCCCCTGCCCGCCAAC CGGCGCTCTGCCGCTGCCTCGCCTCGTGACGACGTTGCCGCGTCGGATAACCAGTCGAAC CACCTGCACCGTTCCGATCTCGCCAGCTTCGGTAGCTCGGAGGTGCGTGACCTGTGCGGG GGCTTGTGAAAGCGAGTTTCGCTGCCTTTGCTTCATCGTCCTGCATTCCTGCTCCTTACA TGTGCGTCGTCCTGCCGTTCTTTGCGTGTCGAATCAAAAAGCGAGAGAGAAAGAAAGAGA GAGGAAAAAAAAGGAAGAAAGAAGAGAGTGCAATTGTTGTAATTACCTGTAGTAGGTAAA ATTTTCAAGCTAACCTTTTTTTTTTGACCTTCTTAAGTTAAGTAGTAGATGTGGCATTGA AATTGTGTTGGTGCAAAGTGGAGTGAGTGTATGGTTGTATGTATAGTAATGGAGGTTGTA TGCTTGTATAGTCTATTGATTGGACGATGCTTTGCTC