Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049761_T085
CDS Infomation	cds chromosome:B73_RefGen_v4:4:43538730:43544362:-1 gene:Zm00001d049761 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pumilio homolog 5
Sequence	ATGGCTACTGAGAGTGCTGTCAGATTAATTGGTGGAACGGGAGCTAGGGACTGGAGTAAG GGATTTGGTGCATTCGACTCTTCAGTGGGTGCCCTTTCAGGGGAAGACTTGGGATTTGTA GATAATGATGCTGGGGTTTATGGGGGCTGGAGCAAATCTGTTCCAAATCGCAGTGGAAGC GCGCCACCTAGCATGGAAGGATCTCTTGCTGCTCTTGGCCATCTCATTGGCCAGCAGAGT GGGAGCTTTGAAGCTAGTTTGGCAACCTTGGATAACATAACTGACAGTTCCAAGTCTGAG GAGCAAGTACTTGCTGATCCAGCATATTTTGAGTATTATGGCTCCAAGGTGAATCTGAAT CCAAGGCTCCCTCCCCCACTTATTTCAAGGGAGAGCCGCCGATTAATGAACCGTGTTGGC AAGGCCAAAGAGTGGAGGGTGGTCTCTCAAGATAACAGCAACAAAGACTCTATATACATT CCTCGATCCACATTGTCAACTCACAAAGAAGAACCTGAGGATGATAAATCTCCAAGATTG GATTTAAGTTCAGTGGAGGATGCCCAGATTATCTCCAGTGCATCCAACTTTCAGAGCCAG GATTTTATGCTGGAGAGCTTTCGACAGAGTGCTGCTTCTTTGCCTAACAGTTCATCTTCT AACCCTTCAAATATCAATACTGGTGATTCTATGCCTGTATATTCTGACATAAATTTGTCA GTTGATGCTGTCAAGCAATCAGACTTGAACTCCTGGACACCAAAAAGGCCACTGAAAAGT ACTGTTAGCAATGATGTTTCATCGCTGCCCCTTTCCAGTTCATCATCATATTCTGGTAGA AAACCTGGTATGCAAACTTCTCAGCAAGAAAAGGCGGCTGTAGACACCAAACATGGAAAT GTTGTGCTTGGCAGTGGTGCAGCTGTTTCTGAACTTGATAATGTGGACTCCAGTATGAAC AATTTGATGATAAGTTTGGATGGCCATGCATCCTCACCTGTCAAGCAGAAGTGGCAGGAC AATGTCTTGTGGCAGTATGGCTCCTTTCTCCCAGCCCAAGGTGATCCTACTCAAGGAATC CATCTTCCCCATGTACCTTCTATTGATAACCTGTCTCATGCTCAGCTCAAGTTACCTGCT GGTGACATGCACCAGTTTTTACCGCAGCCTAGTATGACAACACCTTTCTATACACCAAAT TCGTTTGGAAACCCTTATTATCCGAATTTGCACCCTGGTAATGCTTTTCCAACCTCAATT GGAACTGGAGGGTACGCTGTAAGTGGTTCCATTTTGCCACCTTTTGTGGCTGGCTTTGCT CCCCAAGGTCCTCTTGCTACACCTCTCGACAGTCCTATGACTCCAAGCTTTAGTGGTAGG CCATCTGGATTTTCTCCAGCAGGGAATCTTACAGGGGGAACAGAGTTTATGCAGTCATAT AAAGTATACGGACAACCTGGGGCTGGTATGCAGCCATCCATTCCCGATTCGAACTTTATT CATTTCTTTCAGCATCCCTCTTTATTTCAGTATACTGGTGGAAATCAATACAATACAATG GGTCCAAGATTTACTGTTGTGAATCCAACTGAAAGCTTTGATCCACAAAAGATGATACAT CAAGCTGCATATCCATCTGATCAGAGGCTTCCACTTCCAAGAACTGGCTTTCCTAATTCT CCTACATCCAGAAGAGGAGGGACTGTTCCAAATTATCAAGGCATATCATCCTATGTTGGA GGGCCGATGACTTATCCTACAAGTCCAGTGTTTCAGGGACAAACCTTGCCTGGAGTATTG CCTCCTGATAGGAGAAATGACCCTGTTGGATTTCAGTCCCCCTCAAGAAACATCACCGAT AGTCCTGGGATTCAAAGGCAGCGAGACAGACAGAAGTTTGATGAATCAAAAACTTGCTCT TTCTTAGAAGAGTTGAAGTCCAACAGAGCCCGCAGGGTTGAACTATCTGACATCACAGGT CGTATAATTGAATACAGTGCTGACCAACATGGTAGCCGATTCATTCAACAGAAGTTGGAA AATTGCACTGCCGAAGAGAAGGCATATGTGTTTGCAGAGGTTCTTCCTCATGCTTCATCA CTAATGACTGACGTTTTCGGGAATTATGTGATCCAGAAGTTTTTTGAACATGGAACTCGT GAGCAAAGGAGGGATCTTGCTACCAAGCTCGTTGGTCATGTTTTGCCTCTGAGTCTTCAG ATGTATGGCTGCCGTGTAATCCAGAAGGCTCTTGAAGTTATGGAACTTGACCAGAAAATA GATCTAGTTCATGAGCTTGATGGACATGTTATGAGATGTGTTCGTGATCAAAATGGAAAT CACGTTATACAAAAGTGCATTGAGTGTGTCCCTACAGAACATATTGGTTTTGTAGTATCT GCTTTTCAGGGACAAGTTGCTAGCCTTTCAATGCACCCATATGGCTGCCGTGTAATTCAG AGAGTTTTGGAGCACTGCGGTGGTACCTCACAAAGCCAGTGCATAGTAGATGAGATATTG CAGTCGGCGTGCGTCCTTGCGCAAGATCAGTATGGCAACTATGTTACACAGCATGTTCTA GAAAGAGGAAATGCTCATGAGAGGAGCCAAATTATTATTAAATTGGCTGGGCAGGTTGTT ACCATGAGCCAAAATAAATTTGCATCAAATGTGATAGAGAAGTGTTTTCAACATGGTGAT ATGGCGGAGCGGGATCTCTTGATCAGGCAGATTGTGGAGCAGACAGAGGGCAATGACAAT TTGCTGGTATGTTTGGTAGTGTTTCTTCCATCATCCTTCCCTTGGTCCCTTCCTTTGCCA AATAGGCTGAAAATAAGGCTAAGGGGGTGTTTGAATGCACTAGAGTTAAGGTGTCGTTTA GTTCACGAAATGTAA

Peptide Sequence

PEP ID	Zm00001d049761_P085
PEP Infomation	pep chromosome:B73_RefGen_v4:4:43538730:43544362:-1 gene:Zm00001d049761 transcript:Zm00001d049761_T085 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pumilio homolog 5
Sequence	MATESAVRLIGGTGARDWSKGFGAFDSSVGALSGEDLGFVDNDAGVYGGWSKSVPNRSGS APPSMEGSLAALGHLIGQQSGSFEASLATLDNITDSSKSEEQVLADPAYFEYYGSKVNLN PRLPPPLISRESRRLMNRVGKAKEWRVVSQDNSNKDSIYIPRSTLSTHKEEPEDDKSPRL DLSSVEDAQIISSASNFQSQDFMLESFRQSAASLPNSSSSNPSNINTGDSMPVYSDINLS VDAVKQSDLNSWTPKRPLKSTVSNDVSSLPLSSSSSYSGRKPGMQTSQQEKAAVDTKHGN VVLGSGAAVSELDNVDSSMNNLMISLDGHASSPVKQKWQDNVLWQYGSFLPAQGDPTQGI HLPHVPSIDNLSHAQLKLPAGDMHQFLPQPSMTTPFYTPNSFGNPYYPNLHPGNAFPTSI GTGGYAVSGSILPPFVAGFAPQGPLATPLDSPMTPSFSGRPSGFSPAGNLTGGTEFMQSY KVYGQPGAGMQPSIPDSNFIHFFQHPSLFQYTGGNQYNTMGPRFTVVNPTESFDPQKMIH QAAYPSDQRLPLPRTGFPNSPTSRRGGTVPNYQGISSYVGGPMTYPTSPVFQGQTLPGVL PPDRRNDPVGFQSPSRNITDSPGIQRQRDRQKFDESKTCSFLEELKSNRARRVELSDITG RIIEYSADQHGSRFIQQKLENCTAEEKAYVFAEVLPHASSLMTDVFGNYVIQKFFEHGTR EQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIDLVHELDGHVMRCVRDQNGN HVIQKCIECVPTEHIGFVVSAFQGQVASLSMHPYGCRVIQRVLEHCGGTSQSQCIVDEIL QSACVLAQDQYGNYVTQHVLERGNAHERSQIIIKLAGQVVTMSQNKFASNVIEKCFQHGD MAERDLLIRQIVEQTEGNDNLLVCLVVFLPSSFPWSLPLPNRLKIRLRGCLNALELRCRL VHEM

Transcript Sequence

Transcript ID	Zm00001d049761_T085
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:43538730:43544362:-1 gene:Zm00001d049761 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pumilio homolog 5
Sequence	AGTGTAATGGCTACTGAGAGTGCTGTCAGATTAATTGGTGGAACGGGAGCTAGGGACTGG AGTAAGGGATTTGGTGCATTCGACTCTTCAGTGGGTGCCCTTTCAGGGGAAGACTTGGGA TTTGTAGATAATGATGCTGGGGTTTATGGGGGCTGGAGCAAATCTGTTCCAAATCGCAGT GGAAGCGCGCCACCTAGCATGGAAGGATCTCTTGCTGCTCTTGGCCATCTCATTGGCCAG CAGAGTGGGAGCTTTGAAGCTAGTTTGGCAACCTTGGATAACATAACTGACAGTTCCAAG TCTGAGGAGCAAGTACTTGCTGATCCAGCATATTTTGAGTATTATGGCTCCAAGGTGAAT CTGAATCCAAGGCTCCCTCCCCCACTTATTTCAAGGGAGAGCCGCCGATTAATGAACCGT GTTGGCAAGGCCAAAGAGTGGAGGGTGGTCTCTCAAGATAACAGCAACAAAGACTCTATA TACATTCCTCGATCCACATTGTCAACTCACAAAGAAGAACCTGAGGATGATAAATCTCCA AGATTGGATTTAAGTTCAGTGGAGGATGCCCAGATTATCTCCAGTGCATCCAACTTTCAG AGCCAGGATTTTATGCTGGAGAGCTTTCGACAGAGTGCTGCTTCTTTGCCTAACAGTTCA TCTTCTAACCCTTCAAATATCAATACTGGTGATTCTATGCCTGTATATTCTGACATAAAT TTGTCAGTTGATGCTGTCAAGCAATCAGACTTGAACTCCTGGACACCAAAAAGGCCACTG AAAAGTACTGTTAGCAATGATGTTTCATCGCTGCCCCTTTCCAGTTCATCATCATATTCT GGTAGAAAACCTGGTATGCAAACTTCTCAGCAAGAAAAGGCGGCTGTAGACACCAAACAT GGAAATGTTGTGCTTGGCAGTGGTGCAGCTGTTTCTGAACTTGATAATGTGGACTCCAGT ATGAACAATTTGATGATAAGTTTGGATGGCCATGCATCCTCACCTGTCAAGCAGAAGTGG CAGGACAATGTCTTGTGGCAGTATGGCTCCTTTCTCCCAGCCCAAGGTGATCCTACTCAA GGAATCCATCTTCCCCATGTACCTTCTATTGATAACCTGTCTCATGCTCAGCTCAAGTTA CCTGCTGGTGACATGCACCAGTTTTTACCGCAGCCTAGTATGACAACACCTTTCTATACA CCAAATTCGTTTGGAAACCCTTATTATCCGAATTTGCACCCTGGTAATGCTTTTCCAACC TCAATTGGAACTGGAGGGTACGCTGTAAGTGGTTCCATTTTGCCACCTTTTGTGGCTGGC TTTGCTCCCCAAGGTCCTCTTGCTACACCTCTCGACAGTCCTATGACTCCAAGCTTTAGT GGTAGGCCATCTGGATTTTCTCCAGCAGGGAATCTTACAGGGGGAACAGAGTTTATGCAG TCATATAAAGTATACGGACAACCTGGGGCTGGTATGCAGCCATCCATTCCCGATTCGAAC TTTATTCATTTCTTTCAGCATCCCTCTTTATTTCAGTATACTGGTGGAAATCAATACAAT ACAATGGGTCCAAGATTTACTGTTGTGAATCCAACTGAAAGCTTTGATCCACAAAAGATG ATACATCAAGCTGCATATCCATCTGATCAGAGGCTTCCACTTCCAAGAACTGGCTTTCCT AATTCTCCTACATCCAGAAGAGGAGGGACTGTTCCAAATTATCAAGGCATATCATCCTAT GTTGGAGGGCCGATGACTTATCCTACAAGTCCAGTGTTTCAGGGACAAACCTTGCCTGGA GTATTGCCTCCTGATAGGAGAAATGACCCTGTTGGATTTCAGTCCCCCTCAAGAAACATC ACCGATAGTCCTGGGATTCAAAGGCAGCGAGACAGACAGAAGTTTGATGAATCAAAAACT TGCTCTTTCTTAGAAGAGTTGAAGTCCAACAGAGCCCGCAGGGTTGAACTATCTGACATC ACAGGTCGTATAATTGAATACAGTGCTGACCAACATGGTAGCCGATTCATTCAACAGAAG TTGGAAAATTGCACTGCCGAAGAGAAGGCATATGTGTTTGCAGAGGTTCTTCCTCATGCT TCATCACTAATGACTGACGTTTTCGGGAATTATGTGATCCAGAAGTTTTTTGAACATGGA ACTCGTGAGCAAAGGAGGGATCTTGCTACCAAGCTCGTTGGTCATGTTTTGCCTCTGAGT CTTCAGATGTATGGCTGCCGTGTAATCCAGAAGGCTCTTGAAGTTATGGAACTTGACCAG AAAATAGATCTAGTTCATGAGCTTGATGGACATGTTATGAGATGTGTTCGTGATCAAAAT GGAAATCACGTTATACAAAAGTGCATTGAGTGTGTCCCTACAGAACATATTGGTTTTGTA GTATCTGCTTTTCAGGGACAAGTTGCTAGCCTTTCAATGCACCCATATGGCTGCCGTGTA ATTCAGAGAGTTTTGGAGCACTGCGGTGGTACCTCACAAAGCCAGTGCATAGTAGATGAG ATATTGCAGTCGGCGTGCGTCCTTGCGCAAGATCAGTATGGCAACTATGTTACACAGCAT GTTCTAGAAAGAGGAAATGCTCATGAGAGGAGCCAAATTATTATTAAATTGGCTGGGCAG GTTGTTACCATGAGCCAAAATAAATTTGCATCAAATGTGATAGAGAAGTGTTTTCAACAT GGTGATATGGCGGAGCGGGATCTCTTGATCAGGCAGATTGTGGAGCAGACAGAGGGCAAT GACAATTTGCTGGTATGTTTGGTAGTGTTTCTTCCATCATCCTTCCCTTGGTCCCTTCCT TTGCCAAATAGGCTGAAAATAAGGCTAAGGGGGTGTTTGAATGCACTAGAGTTAAGGTGT CGTTTAGTTCACGAAATGTAACGTAAATGGCATTGATAATAATTCACACTCGAATACCAG CCCGGGTGGTGAAGGCGGCGACCC