Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049760_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:43396449:43401512:-1 gene:Zm00001d049760 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA pseudouridine synthase 3 mitochondrial
Sequence	ATGCTGTGCCGCGGCCGACGCCGTCCGGGGCTGTGGCGGTGGCCGACGGCGCTGCGGCGG CTGTCCCGGCTGGCACCGCCTGCGCCTGCGCCTGCCGACCCGGTGGTGGTTCGCGTCGAC GCCAACAACGTCGCGCGCTTGGGGGCGCCCAAGCCCCGGCCGAGGCCGCGGCAGTTGCTC TCACTGCCGCCGTTCCCCGCAGGGCAGGACCCTCTCCCAGGAAGGAAGGTGGCGCCGCGA CGCGTGACGGCAGTGAGCTGGGTGAAGCACTATTTCGCCGACGTGCCGCAGGAGGCCGTG CAGGCTCATTTCAACAGGAGAATGGTTTTTTCTGAGTGCTATGACCACAAGGTTTCAGCT GACAGCATTCGAACTCAGAAGCATCATCTGAAAAAGATAAAACATAATGATGCTATGGAG CCTGGAATGAGGATTCACCTTCCTGTTTCAGTGGCTGAGAGTGACATAAAGAAGCGTTAT GAGACCATTCCGACTGCCACACTGCATCCTAATAAAGATGAGATCGAGTACCTGAGGAGG CTAGTCATCTACAGGGACTCTGCTATATTGGTGCTTAACAAGCCCCCCAAAGTGCCCATG AAAGGACATTTGCCAGTACATAACAGCATGGACGTGCTTGCTGCTGCAGCACTGTCATAT GGAAGCGAGGAGGGTCCAAAATTGGTCCATCGACTGGACAGAGAAAGCAGCGGTCTGATT TTGATGGGCAGAACAAAAGAAAGCTTTACTCGGCTGCACTGGCTTCTCACTAGTGTAAAC TTAGCTAGAACATCTTCTCAGACATGGAATAAAGCCTGTGAAGCATACGCACAGAAGTAT TGGGCACTAGTCATTGGTACTCCTAAAGAAAGGGAAGGAGTTATATCTGCTCCTATCTCA AAGGTACTCCTTGATGACGGGAAAGCCGAACGGGTCATTCTGGCACATCCTTCTGGCATA GATGGCGCGCAAGAGGCAATAACCGAGTACCGGGTGATGGGACCAACCATTAATGGGTGC TCATGGATCGAGCTACAGCCATTGACTGGGCGGAAGCACCAGCTCCGAGTCCACTGTGCT GAAGCCCTAGGCACTCCCATTGTCGGGGATTACAAATACGGTTGGTTTGTGCACCAAACG TGGAAGCAAAATCCCCAGCCTGACTTCGAACCGTTCACTGGAGAGCCATACAAGCTGAGG CGGCCAGAAGGCTTGGAGATTCAGAAGGGCAGTGTCCTCTCAAAAGTCCCTTTACTACAC CTGCATTGCCGGGAGATGGTCATCCCCAACATTGCAAAGTTCCTGAGCAGCACTGGAGGA TGGCACGAAAACGGCACCCCATGGGCCAAGGAGAAGCCCAACCTCCTAAGATTCGTCGCG CCAATGCCTCCGCACATGAAAATCAGTTGGAACATCATGTCTTCATACCTGGTGTAA

Peptide Sequence

PEP ID	Zm00001d049760_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:43396449:43401512:-1 gene:Zm00001d049760 transcript:Zm00001d049760_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA pseudouridine synthase 3 mitochondrial
Sequence	MLCRGRRRPGLWRWPTALRRLSRLAPPAPAPADPVVVRVDANNVARLGAPKPRPRPRQLL SLPPFPAGQDPLPGRKVAPRRVTAVSWVKHYFADVPQEAVQAHFNRRMVFSECYDHKVSA DSIRTQKHHLKKIKHNDAMEPGMRIHLPVSVAESDIKKRYETIPTATLHPNKDEIEYLRR LVIYRDSAILVLNKPPKVPMKGHLPVHNSMDVLAAAALSYGSEEGPKLVHRLDRESSGLI LMGRTKESFTRLHWLLTSVNLARTSSQTWNKACEAYAQKYWALVIGTPKEREGVISAPIS KVLLDDGKAERVILAHPSGIDGAQEAITEYRVMGPTINGCSWIELQPLTGRKHQLRVHCA EALGTPIVGDYKYGWFVHQTWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLH LHCREMVIPNIAKFLSSTGGWHENGTPWAKEKPNLLRFVAPMPPHMKISWNIMSSYLV

Transcript Sequence

Transcript ID	Zm00001d049760_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:43396449:43401512:-1 gene:Zm00001d049760 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA pseudouridine synthase 3 mitochondrial
Sequence	TACGGCTTCCTTTTGGTGCAGCACACCTTCATCGGGCCCTCAGCGACCGACGCCGCCTCC GACGACAGCCCCTGGAAATTGGAAGCCAAACCCAGTGGCCATCGCAAAATCTGACCGCCG GCTACTGGCCTCTCCGTGCGTGTGACTGTTCGTTTGATTTCCAATTGGAAGCTGGATCGA TGGAGATCGTGGATGAGAGGAGGCGACGGCGCCCTCTCTACCGGTTATAAAGGTGGCACC GCAGATGCTCCGGTCGGACCCGGCCCACCAGTCGAAACGGAGAGAAGGGTGAAGTCCTCC AACCAAACCTGAAAACGGCGGCACGCGGGTCGACTGGAAACAATACGGACGACTAGTGGC CTACGCCCTGCGGGATGCTGTGCCGCGGCCGACGCCGTCCGGGGCTGTGGCGGTGGCCGA CGGCGCTGCGGCGGCTGTCCCGGCTGGCACCGCCTGCGCCTGCGCCTGCCGACCCGGTGG TGGTTCGCGTCGACGCCAACAACGTCGCGCGCTTGGGGGCGCCCAAGCCCCGGCCGAGGC CGCGGCAGTTGCTCTCACTGCCGCCGTTCCCCGCAGGGCAGGACCCTCTCCCAGGAAGGA AGGTGGCGCCGCGACGCGTGACGGCAGTGAGCTGGGTGAAGCACTATTTCGCCGACGTGC CGCAGGAGGCCGTGCAGGCTCATTTCAACAGGAGAATGGTTTTTTCTGAGTGCTATGACC ACAAGGTTTCAGCTGACAGCATTCGAACTCAGAAGCATCATCTGAAAAAGATAAAACATA ATGATGCTATGGAGCCTGGAATGAGGATTCACCTTCCTGTTTCAGTGGCTGAGAGTGACA TAAAGAAGCGTTATGAGACCATTCCGACTGCCACACTGCATCCTAATAAAGATGAGATCG AGTACCTGAGGAGGCTAGTCATCTACAGGGACTCTGCTATATTGGTGCTTAACAAGCCCC CCAAAGTGCCCATGAAAGGACATTTGCCAGTACATAACAGCATGGACGTGCTTGCTGCTG CAGCACTGTCATATGGAAGCGAGGAGGGTCCAAAATTGGTCCATCGACTGGACAGAGAAA GCAGCGGTCTGATTTTGATGGGCAGAACAAAAGAAAGCTTTACTCGGCTGCACTGGCTTC TCACTAGTGTAAACTTAGCTAGAACATCTTCTCAGACATGGAATAAAGCCTGTGAAGCAT ACGCACAGAAGTATTGGGCACTAGTCATTGGTACTCCTAAAGAAAGGGAAGGAGTTATAT CTGCTCCTATCTCAAAGGTACTCCTTGATGACGGGAAAGCCGAACGGGTCATTCTGGCAC ATCCTTCTGGCATAGATGGCGCGCAAGAGGCAATAACCGAGTACCGGGTGATGGGACCAA CCATTAATGGGTGCTCATGGATCGAGCTACAGCCATTGACTGGGCGGAAGCACCAGCTCC GAGTCCACTGTGCTGAAGCCCTAGGCACTCCCATTGTCGGGGATTACAAATACGGTTGGT TTGTGCACCAAACGTGGAAGCAAAATCCCCAGCCTGACTTCGAACCGTTCACTGGAGAGC CATACAAGCTGAGGCGGCCAGAAGGCTTGGAGATTCAGAAGGGCAGTGTCCTCTCAAAAG TCCCTTTACTACACCTGCATTGCCGGGAGATGGTCATCCCCAACATTGCAAAGTTCCTGA GCAGCACTGGAGGATGGCACGAAAACGGCACCCCATGGGCCAAGGAGAAGCCCAACCTCC TAAGATTCGTCGCGCCAATGCCTCCGCACATGAAAATCAGTTGGAACATCATGTCTTCAT ACCTGGTGTAATTTCTGTATTTTTTTTCTTCCATACTTCTCTAGCTTCTCATGTTAACCC CAAGTTCCATAGAGTGATTTGTTTGTTCAAGATTCTGAGATTGTAGCCACCATTTCTGAA TCAATGCAGAAAACTACATTTTCTGAATCAA