Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049736_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:4:42106332:42110280:-1 gene:Zm00001d049736 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 13 description:RING/FYVE/PHD-type zinc finger family protein
Sequence	ATGGCTGGTCTGGCAAGCAGTCTCTTACTGATTTCACAAGCTTCTAATCAAAAGCAGGCT TCTGACATTTCAGAAATTGATGTGGCTGAACACAAGATAGAGGAAACAAGTCTGGTTGGT GTCACCCGCAAAGCCCTAAGGAAGTTCACTCCCCCATGCGATTCTGGCTATTCTACCATA CCAAGACGAACTGGGACATCTGGATCGGATGGAATTTGCAAGGATTGTGGTAGAAAGGCA GACAGCAAAGGAAGAATTATCTGTGACAGGTGTGAAGCCGCGTACCATGTTTCATGTCTC AAGCTTGCCATTGATGAAGAGGCCCCAGCAAAATGGTACTGTCCCACCTGCGTCGAACCA GACGTACCTTTAAAGAGCAACAACCATGGCAGAGCACATGAAGGCTGCGATGTATGCGAG TGGCTTGAGGTGGAGAAGCCAGAAGAACCTGCCGAAGAACCTGAATTGGCCGTCAAAACA CAGGAGAGCTCAGTGTCAAGCATTGTCGAAGACAGTGAACCAGACCTCTCGATAACCGCT CTAGCAAACTTGTGCAAGCTTTGTGGCACGTGTGAAGATGAGAACAAGAAGTTCGTGGTA TGCGGGCATGGCTACTGTTCTTTCAAGTTCTATCATGCCCTGTGCCTGAAAGAAAGCCAG ATTGCAAGCGAGAAGCAGAGGAATCTAAAATGCTGGTACTGCCCGTCTTGCCTGTGCAGA CGCTGCTTCAAGAACAAGGACGACGAGAAAATAGTGTTGTGTGATGGCTGTGACGAAGCT TACCACACTTACTGCATGGATCCGCCGCGCAGTTCTGTCCCGAGAGGTAAATGGTTCTGC ACGCCGTGTAGTGCATGGAGGTCGGCGAACGGGATGCAGAGGTATGAGAAGTCGATCCTG CAGAGCGTCAAGCGTGTTCCTGATGCCAAAGGGCCCAAGGTGCAGGCAGCAGCTGCTGCT CCAGGAAAATAA

Peptide Sequence

PEP ID	Zm00001d049736_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:4:42106332:42110280:-1 gene:Zm00001d049736 transcript:Zm00001d049736_T006 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 13 description:RING/FYVE/PHD-type zinc finger family protein
Sequence	MAGLASSLLLISQASNQKQASDISEIDVAEHKIEETSLVGVTRKALRKFTPPCDSGYSTI PRRTGTSGSDGICKDCGRKADSKGRIICDRCEAAYHVSCLKLAIDEEAPAKWYCPTCVEP DVPLKSNNHGRAHEGCDVCEWLEVEKPEEPAEEPELAVKTQESSVSSIVEDSEPDLSITA LANLCKLCGTCEDENKKFVVCGHGYCSFKFYHALCLKESQIASEKQRNLKCWYCPSCLCR RCFKNKDDEKIVLCDGCDEAYHTYCMDPPRSSVPRGKWFCTPCSAWRSANGMQRYEKSIL QSVKRVPDAKGPKVQAAAAAPGK

Transcript Sequence

Transcript ID	Zm00001d049736_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:42106332:42110280:-1 gene:Zm00001d049736 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 13 description:RING/FYVE/PHD-type zinc finger family protein
Sequence	GGCTCTCGGCGCTAGTTTCCCCCGCTCCTCCGGTTTGGACAACCGCTTGCAGCGGCTTCG CTTCGTCCTCCCACCCTCCCCTCGTCCCTCTCCGCTCCGGCGTGCTTCGGTTGCCCACCA AGATCTCTAATTTCCCATCAAACCCTAGCCCTGTCGCCGCCTCCTCACTGCCCTGACCCT CTCCTCCTCACGCTTCCCGTTCCCCATCTCGCCGCCGTTTCTTTGGCCTGGGAGACACGC TCTGCTAGCTGTGTCCGCGTATGGCCTCCGACGGTGCCCCCAGAGGCCGCCGTCCCAAGC GCCCCGCTTCGGGAGGCCTGGTCCAACCCGACGTCCTCACCTACAAGAGACGACGCCGCG GCACCGGCGCCAACGCCGGCCACAGCGCCGTCACGTCGGGCCCCGACCCCGCAGAATCAG ATGAGCGCGGTGGTGCACGCCACCAATTCCCAGCAAGGTGGGCGCCAAACGCTGGACAGG CACTGGAGAAGCTGGAGGGACACGCTGGAGGGCGTCCTTCGATCCACTGCTGTGAACCAG AGCGCCGGAGGGATTCAGAACTGCATCCGAGATGCGCTCAGATATAATGGTTGGCATCCC ACAGAACATGGAAACTTAGTTGATGACCGAGGAACAGACGAAGAGGACGCTACTGGAGCT CTACATTCTGAAGAGAGTAGTGGTGCCTTGGTTAAGTTAGAAGATGGAACAGTTGCATCT TTGGAAGCCAACAAGGCGATGTGCCACGACACTCTCTTTGACATTCTAATCTCCGAGAAG TTTGCCATGTTGTGTGATCTGCTAGCTGCAACATTCCACGGCAGTAAGCCAGACGACGTT ATTGGTTTGCAAATAATTGATGCCAAGATGAGAAATGGGGATTATGCACAGAACCCTGCG CTGTTTGACCATGATATTAAGCAGGTACCTGTTTGTTTGTTTCACTGGTTCCTTCTTTGT TCCCTGTGCTGTTCTCTCTGATATAGGTAAAGATGTAGATGTGGTTTTACTTTAGAGCCT ATTGTAGGTTCTTTCGATGCTCAACTTTTGAAAATGGCCCCTATTGCTTGTCTGTTTGAC CACATAGATATGGAAAGTCCATATAGTTAGGAATGATTCTTCCTGTGTTCACTACCTGTT TCGGACCCTTTTTCGAGTGCATCGGTTGGCCCTTGCAAATTCTTCTAATATCCATCCAAA TTCCAAACATATGAATCATTTTTCCTACGCACTGTAGCTGGAATAGGTATGCAGTATGCC CAACCATAAGGGCATAAATGTAATAGCCTCGTAGCCATGCTTCTCTACTGGCTGCAGGGT AATGCCTCCTTTTCCAATAAAGGACATCTAATAGCTGTTTTTACTGGGAAGGGATCTGCT GTCTTGGTCTTCATGAATCTGTGCTTTGTTCCTCTCTGCCTGTGTCATCCGCTGCACTTG ACCTCACCTTGCCAAATCCCTTCGGCTTCTCTCTTTAAGTGAATCACAAGGCGATGGCAG TCATGAATGCATATAAATCAGACATGGGTTGCATCACGCTGCCATACACAACTATTCAAT AAGTATGTTGCAATCCATGTATTGTGAGGAAGCATTTATTTACCTTGTTCACTGCTGTGA GCTGTCCTTGAATGAAAGAAGGTAATTATTTTAAAACAGGAAAGTTATATTAATATTTTA GGGGCCACGGGATAAGAAATTAGATTTTTTTTGTTAGTACCTCCTATATATCTCAATGGC CAAAGTGGTCCTCTGATATTTGTTTTTCCATTTTTCTCTCATATGTAAATTCTTTTGTTT GCTGCTATTCATGTACCAAACACCCCCAAAAATTACCATAAACATGCAGTTGAAAACATA CGGTCAATGCTGTTTTTTTAATATGTATACATATTGGTTTATTATCTAGATATGGAAGAA GTTTGAACACGTTGGCCAAGAAATGGCTGGTCTGGCAAGCAGTCTCTTACTGATTTCACA AGCTTCTAATCAAAAGCAGGCTTCTGACATTTCAGAAATTGATGTGGCTGAACACAAGAT AGAGGAAACAAGTCTGGTTGGTGTCACCCGCAAAGCCCTAAGGAAGTTCACTCCCCCATG CGATTCTGGCTATTCTACCATACCAAGACGAACTGGGACATCTGGATCGGATGGAATTTG CAAGGATTGTGGTAGAAAGGCAGACAGCAAAGGAAGAATTATCTGTGACAGGTGTGAAGC CGCGTACCATGTTTCATGTCTCAAGCTTGCCATTGATGAAGAGGCCCCAGCAAAATGGTA CTGTCCCACCTGCGTCGAACCAGACGTACCTTTAAAGAGCAACAACCATGGCAGAGCACA TGAAGGCTGCGATGTATGCGAGTGGCTTGAGGTGGAGAAGCCAGAAGAACCTGCCGAAGA ACCTGAATTGGCCGTCAAAACACAGGAGAGCTCAGTGTCAAGCATTGTCGAAGACAGTGA ACCAGACCTCTCGATAACCGCTCTAGCAAACTTGTGCAAGCTTTGTGGCACGTGTGAAGA TGAGAACAAGAAGTTCGTGGTATGCGGGCATGGCTACTGTTCTTTCAAGTTCTATCATGC CCTGTGCCTGAAAGAAAGCCAGATTGCAAGCGAGAAGCAGAGGAATCTAAAATGCTGGTA CTGCCCGTCTTGCCTGTGCAGACGCTGCTTCAAGAACAAGGACGACGAGAAAATAGTGTT GTGTGATGGCTGTGACGAAGCTTACCACACTTACTGCATGGATCCGCCGCGCAGTTCTGT CCCGAGAGGTAAATGGTTCTGCACGCCGTGTAGTGCATGGAGGTCGGCGAACGGGATGCA GAGGTATGAGAAGTCGATCCTGCAGAGCGTCAAGCGTGTTCCTGATGCCAAAGGGCCCAA GGTGCAGGCAGCAGCTGCTGCTCCAGGAAAATAAGCAGCGGCGCTGTGGATGCGAGGGTA CAAAAAGAAATGAAAGGATTCTTGTTCCTCTGAAGGTGTATGCATTACTCTGACAGACTG AATCGAGTAATCGGAGGATGGGCTGTGTATACGTGGGGAGAAGACCTGTTGGCTTGATGG AGCTGCTGATGTTGGTTCCCTGTCCTGTTATTTCCTTCCTGGAATTCTTCTGACTACCCC AAGCGAGTAGGTTGTTGTTGTTGTTGTTGTTCTGTTATGTTGTGTCTGCCCTTTACCTGA TGATATGTACATGCCCGTTAC