Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049734_T037
CDS Infomation	cds chromosome:B73_RefGen_v4:4:42097360:42102168:1 gene:Zm00001d049734 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding family
Sequence	ATGAAACTCAACCGGCTACAAAGAATTGCACGCTGTACAGGCTCTCCCATAATTTCGTTT TCAGAAGTTTTGGATAAACCAAAGCTGAAGCAATGTGACTACTTTCATATCGAAAAATTT ATCGAGGAGCACAACAACGCCAGTGAGGGTGGAAAGATGCCATCTAAAACATTAATGTTC TTGGAAGGCTTTCCACGTCCACTCGGTTGCACGATACTGCTAAAAGGAGCAAACAGTGAA GAATTGAAGAAAGTCAAACAAGTAATGCATTTTACGGTCTTTGCAGCATATCACTTGATC CTTGAAACATCTTTCTTTGAAGATCAAAGGGTTTTTCTAAATGATAAAAGTACCCCCAAA GAAATTTCTGTTACTGCTACAGAAGGGGCATCACCAACTGCTTATGATGTTGCTGCTCTT AGTGGTGCTATCCCTAGCTTTCCTTCACATGAAAATGGGGATGCATTCAGTTCAGTATCC AGCAGCTCTGCAAATGACCTTGAACAAGGTACAAGTATCAGGCCCAATAATGCTGAGAGG TTAACATCACTAGTCCAAGGGCCACTAAGAAAACTGTTCACTGACATGTTACGTCACCAG AATATTTACTTACCTGTTACATCATTGCAAGAGGCAAATGATATTAGTAAGGAAGTCAGG GCTGAATCAAGTCAAGAAACTGTTATTAATGGTTTCCATAGGCCAGAGATAGAAGAGTCT GTGGTTTCAATTGAAAATGGAGATTCCATAAATGATGCCCAGAAACAAGAAATTGCTCAA GCAATAATGCCAAGAGGTTCTTCTGCAAATGATAAAGATGCAGAATCGTCTGTTATGGGA GACAATGGGGCACATAGTACAAGTATCATTATCAAAGAGAAATATGTCGATGATGATCAA GCTGATGATGCACTTGATTCTCACAGCATACTGATTTTGATGTCTAGCCAGTGCCCGGAA AAGCAGGTTATCTGTGAGCAAAGTCATTTAACCCGTATAAAATACTACGGGAGTTTTGAT GTGTCCTTGGGCAGATATTTGCAAGATATTCTGCAGAATCAGAAACTGAGTTGCTCCTCA TGTGGAGAGCCTCCAGAGTCGCACATGTACTCTTACACGCACCGCAATGGAAATTTGACC GTTCTAGTGAAACATCTGGTGCCCCAACACCATTTGCCTGGTGAATCTGAAGGAAAAGTA TGGATGTGGACTAGGTGCTCAAGATGTGATCATGAACATGGGGTATCCAAACCAACTCCA AGAGTACTAATATCAGCTGAAGCGCGTAACCTCTCGTTTGGGAAATTCCTGGAACTCAGT TTTTCGAGCCACTCTGCAGCAAGAAGGTTATCTATATGTGGACATCTGGTCAACAGGGAT TGCTTGCGTTTTTTTGGGCTGGGCTCTAAAGTTGCTATGTTTCGGTACTCATCTGTTGAG ATCTACACTACCTGCAAACCACAACCTACTCTCCAGTTCGTCAACCCCATCAGACAGGAT TGGTTTGAAGGACAAAGGAGGAATGTTCATGCTAAAGGTATGGCGCTTTTCTCTGGGGTT GCAAGATTTCTACAGAACTTGAAGAATGAACATCCTGATGCAATAACGTTAGCAATCCAT TGTGGCCTTGCATTCCCTGTTAAGGACTTCACTGAACTAGAAGAGTTGTTGATAAAAGAA AAGGCCCAGTTTGAGAGTTCTGTGGACAAGGCCACTGATCAAAATGGGGTACCAACCTCT TCTGTGCATGAACTGTTGAATATAAATTGGTACTATCAGGACCTTCTACTTGAGCTTTAC ATTTGGGACCGCCGTCTACATCAATTATTCTATTGTAAATCTGTCAAACTAGAAAGTGTT TCTAATTACAAGAATCTTGCTGATACTGTTGATGGGATCTGTGGTGATAAATTCGGTGTT GATAAGAAAATTGATGAATTTACATATGATGAAACTACGGCAGCTTTGGGGGTAGCCAGT ACCACAGAACCTGCAAGTAACAAACTTGACCATCAATCAGGGGATGCTGCAGCATCCTTA CTTGATGAAAGCCAGGAAGCTGGGCACTCAGAAATTCCTTGCAATGGAGGTAGTAAAGCT GAGAAATCTTCCATTGCTCATGGTCAAATAAAGGTAGATGGCACAACAAAAACCGGAAAT GATCCTTGCTTCGAAATATCCAATGATAAGAAGGTCCAGGTCAATCTTACAGTAGCAGAT CCAATATCTATGGAACAGGAGCGTTGTAGCACTCTCCAACAGTTCAAATATCCTTATTGG GATGACAGGGAAAGGTGGATTTGGAATTCAATTTCTGAGTCACAATTGGCTTACAGGAAT GACATTCAAATTGGATATTTGGAAAAATTCGAACTCATTAACAATTATTTGCCACATTAC CTTCCTCCCTTGTTTGAACAACATGATGATGCGGACTCTCCGCATTTCGCGGTAGGTCCT GGTGGTAATATTCTGTGCATAATGGAAGATGAGATATCCAGCATAATAGCTCGTGCTCTT GCCATATCTGACGAACGCCGCCATTTGATAGATTTAAAATTTGAGAATGGAATGGATTAC TCCAAGGGAGAGCATGCTAAAGCAATGGAGAAATCCTATAGTTTTCTGTCTGAAAATTCT TTCACCTCATCACCATGGTCATCTACAGATTCTGAAGCAAGCTTGTCATCTCTGTCTTCA TTTTCATCATTTTCATCTGATGACTTTTCTGGTTATGATAGCTCTTCTTTATTGTCCTCG ATGCATCCAGAAATGACTGTGAACGGGAAAATAACTCTGAAAGGCAAATATTCAGTCACT GTTGTATATGACAATCAATTCTTTGCACTCCGAAAAAAGTGTTGCCCATCCGAGCTTGCA TATATTACTTCCTTAAGCCGCTGCAAGAAGTGGAATGCTCAAGGTGGAAAGAGCAAGGCC TATTTTGCAAAGACAACAGATGACAGGTTCATCATAAAGCAAATCAAGAAAACAGAGTTC GATTCATTTATTAAATTTGCACCTGATTACTTTAGGCATGTTTACCATTCTCTGGACACT GGAAGCCAAACTTGCCTTGCCAAGATATTAGGAATATATCAGGTTAAGCAGATTAGACAT GGCAAAGAGGTAAAGATCGACTTGATGGTGATGGAAAATCTTCTCTTTGGCCACAATATT TCACGAATTTATGATCTCAAAGGTGTTACTTTTTCGCGACGCGTCACTGACTCAAATGAT CATGATACTGTTTACCTGGACCAAAATTATGTTGAGGACATGGGTTTTTCTCCAATCTAT ATTGGTGGAAGAACAAAGCATCTTTTGCAGCGTGCAATATGGAATGACACGTCTTTCCTC ACTTCGGTGAATGTCATGGACTATTCTCTACTTGTCGGAGTGGACAAAGAGAAGCATGAA CTTGTGTTTGGCATCATTGATTATCTGAGGCAATATACTTGGGACAAACAATTGGAAACA TGGGTGAAGACTTCTCTGGTAGTACCCAAGAATGTTTCACCAACTGTAATTTCCCCCAAG GAATACAAAAAAAGGTTTAGGAAGTTCATGGCAAAGTACTTCCTGTCAGTTCCAGACACA TGGAGCTCTGATAATTCATCTAATCCATGCAAATCCTTTGGTCAGAGCAATCACAAGTTA GCGGAAGTCCACAATGGTGATAGCCTGCTTCAGCACCCAAATGAAGCTGAGGGGTGTGTC TAA

Peptide Sequence

PEP ID	Zm00001d049734_P037
PEP Infomation	pep chromosome:B73_RefGen_v4:4:42097360:42102168:1 gene:Zm00001d049734 transcript:Zm00001d049734_T037 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding family
Sequence	MKLNRLQRIARCTGSPIISFSEVLDKPKLKQCDYFHIEKFIEEHNNASEGGKMPSKTLMF LEGFPRPLGCTILLKGANSEELKKVKQVMHFTVFAAYHLILETSFFEDQRVFLNDKSTPK EISVTATEGASPTAYDVAALSGAIPSFPSHENGDAFSSVSSSSANDLEQGTSIRPNNAER LTSLVQGPLRKLFTDMLRHQNIYLPVTSLQEANDISKEVRAESSQETVINGFHRPEIEES VVSIENGDSINDAQKQEIAQAIMPRGSSANDKDAESSVMGDNGAHSTSIIIKEKYVDDDQ ADDALDSHSILILMSSQCPEKQVICEQSHLTRIKYYGSFDVSLGRYLQDILQNQKLSCSS CGEPPESHMYSYTHRNGNLTVLVKHLVPQHHLPGESEGKVWMWTRCSRCDHEHGVSKPTP RVLISAEARNLSFGKFLELSFSSHSAARRLSICGHLVNRDCLRFFGLGSKVAMFRYSSVE IYTTCKPQPTLQFVNPIRQDWFEGQRRNVHAKGMALFSGVARFLQNLKNEHPDAITLAIH CGLAFPVKDFTELEELLIKEKAQFESSVDKATDQNGVPTSSVHELLNINWYYQDLLLELY IWDRRLHQLFYCKSVKLESVSNYKNLADTVDGICGDKFGVDKKIDEFTYDETTAALGVAS TTEPASNKLDHQSGDAAASLLDESQEAGHSEIPCNGGSKAEKSSIAHGQIKVDGTTKTGN DPCFEISNDKKVQVNLTVADPISMEQERCSTLQQFKYPYWDDRERWIWNSISESQLAYRN DIQIGYLEKFELINNYLPHYLPPLFEQHDDADSPHFAVGPGGNILCIMEDEISSIIARAL AISDERRHLIDLKFENGMDYSKGEHAKAMEKSYSFLSENSFTSSPWSSTDSEASLSSLSS FSSFSSDDFSGYDSSSLLSSMHPEMTVNGKITLKGKYSVTVVYDNQFFALRKKCCPSELA YITSLSRCKKWNAQGGKSKAYFAKTTDDRFIIKQIKKTEFDSFIKFAPDYFRHVYHSLDT GSQTCLAKILGIYQVKQIRHGKEVKIDLMVMENLLFGHNISRIYDLKGVTFSRRVTDSND HDTVYLDQNYVEDMGFSPIYIGGRTKHLLQRAIWNDTSFLTSVNVMDYSLLVGVDKEKHE LVFGIIDYLRQYTWDKQLETWVKTSLVVPKNVSPTVISPKEYKKRFRKFMAKYFLSVPDT WSSDNSSNPCKSFGQSNHKLAEVHNGDSLLQHPNEAEGCV

Transcript Sequence

Transcript ID	Zm00001d049734_T037
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:42097360:42102168:1 gene:Zm00001d049734 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding family
Sequence	TCGAGAAAACTGTTTCACGAAACATTCAAGAACTTCTTCTGAAAGAAGGTGTCACTCTAA TTCTCGATATGAAACTCAACCGGCTACAAAGAATTGCACGCTGTACAGGCTCTCCCATAA TTTCGTTTTCAGAAGTTTTGGATAAACCAAAGCTGAAGCAATGTGACTACTTTCATATCG AAAAATTTATCGAGGAGCACAACAACGCCAGTGAGGGTGGAAAGATGCCATCTAAAACAT TAATGTTCTTGGAAGGCTTTCCACGTCCACTCGGTTGCACGATACTGCTAAAAGGAGCAA ACAGTGAAGAATTGAAGAAAGTCAAACAAGTAATGCATTTTACGGTCTTTGCAGCATATC ACTTGATCCTTGAAACATCTTTCTTTGAAGATCAAAGGGTTTTTCTAAATGATAAAAGTA CCCCCAAAGAAATTTCTGTTACTGCTACAGAAGGGGCATCACCAACTGCTTATGATGTTG CTGCTCTTAGTGGTGCTATCCCTAGCTTTCCTTCACATGAAAATGGGGATGCATTCAGTT CAGTATCCAGCAGCTCTGCAAATGACCTTGAACAAGGTACAAGTATCAGGCCCAATAATG CTGAGAGGTTAACATCACTAGTCCAAGGGCCACTAAGAAAACTGTTCACTGACATGTTAC GTCACCAGAATATTTACTTACCTGTTACATCATTGCAAGAGGCAAATGATATTAGTAAGG AAGTCAGGGCTGAATCAAGTCAAGAAACTGTTATTAATGGTTTCCATAGGCCAGAGATAG AAGAGTCTGTGGTTTCAATTGAAAATGGAGATTCCATAAATGATGCCCAGAAACAAGAAA TTGCTCAAGCAATAATGCCAAGAGGTTCTTCTGCAAATGATAAAGATGCAGAATCGTCTG TTATGGGAGACAATGGGGCACATAGTACAAGTATCATTATCAAAGAGAAATATGTCGATG ATGATCAAGCTGATGATGCACTTGATTCTCACAGCATACTGATTTTGATGTCTAGCCAGT GCCCGGAAAAGCAGGTTATCTGTGAGCAAAGTCATTTAACCCGTATAAAATACTACGGGA GTTTTGATGTGTCCTTGGGCAGATATTTGCAAGATATTCTGCAGAATCAGAAACTGAGTT GCTCCTCATGTGGAGAGCCTCCAGAGTCGCACATGTACTCTTACACGCACCGCAATGGAA ATTTGACCGTTCTAGTGAAACATCTGGTGCCCCAACACCATTTGCCTGGTGAATCTGAAG GAAAAGTATGGATGTGGACTAGGTGCTCAAGATGTGATCATGAACATGGGGTATCCAAAC CAACTCCAAGAGTACTAATATCAGCTGAAGCGCGTAACCTCTCGTTTGGGAAATTCCTGG AACTCAGTTTTTCGAGCCACTCTGCAGCAAGAAGGTTATCTATATGTGGACATCTGGTCA ACAGGGATTGCTTGCGTTTTTTTGGGCTGGGCTCTAAAGTTGCTATGTTTCGGTACTCAT CTGTTGAGATCTACACTACCTGCAAACCACAACCTACTCTCCAGTTCGTCAACCCCATCA GACAGGATTGGTTTGAAGGACAAAGGAGGAATGTTCATGCTAAAGGTATGGCGCTTTTCT CTGGGGTTGCAAGATTTCTACAGAACTTGAAGAATGAACATCCTGATGCAATAACGTTAG CAATCCATTGTGGCCTTGCATTCCCTGTTAAGGACTTCACTGAACTAGAAGAGTTGTTGA TAAAAGAAAAGGCCCAGTTTGAGAGTTCTGTGGACAAGGCCACTGATCAAAATGGGGTAC CAACCTCTTCTGTGCATGAACTGTTGAATATAAATTGGTACTATCAGGACCTTCTACTTG AGCTTTACATTTGGGACCGCCGTCTACATCAATTATTCTATTGTAAATCTGTCAAACTAG AAAGTGTTTCTAATTACAAGAATCTTGCTGATACTGTTGATGGGATCTGTGGTGATAAAT TCGGTGTTGATAAGAAAATTGATGAATTTACATATGATGAAACTACGGCAGCTTTGGGGG TAGCCAGTACCACAGAACCTGCAAGTAACAAACTTGACCATCAATCAGGGGATGCTGCAG CATCCTTACTTGATGAAAGCCAGGAAGCTGGGCACTCAGAAATTCCTTGCAATGGAGGTA GTAAAGCTGAGAAATCTTCCATTGCTCATGGTCAAATAAAGGTAGATGGCACAACAAAAA CCGGAAATGATCCTTGCTTCGAAATATCCAATGATAAGAAGGTCCAGGTCAATCTTACAG TAGCAGATCCAATATCTATGGAACAGGAGCGTTGTAGCACTCTCCAACAGTTCAAATATC CTTATTGGGATGACAGGGAAAGGTGGATTTGGAATTCAATTTCTGAGTCACAATTGGCTT ACAGGAATGACATTCAAATTGGATATTTGGAAAAATTCGAACTCATTAACAATTATTTGC CACATTACCTTCCTCCCTTGTTTGAACAACATGATGATGCGGACTCTCCGCATTTCGCGG TAGGTCCTGGTGGTAATATTCTGTGCATAATGGAAGATGAGATATCCAGCATAATAGCTC GTGCTCTTGCCATATCTGACGAACGCCGCCATTTGATAGATTTAAAATTTGAGAATGGAA TGGATTACTCCAAGGGAGAGCATGCTAAAGCAATGGAGAAATCCTATAGTTTTCTGTCTG AAAATTCTTTCACCTCATCACCATGGTCATCTACAGATTCTGAAGCAAGCTTGTCATCTC TGTCTTCATTTTCATCATTTTCATCTGATGACTTTTCTGGTTATGATAGCTCTTCTTTAT TGTCCTCGATGCATCCAGAAATGACTGTGAACGGGAAAATAACTCTGAAAGGCAAATATT CAGTCACTGTTGTATATGACAATCAATTCTTTGCACTCCGAAAAAAGTGTTGCCCATCCG AGCTTGCATATATTACTTCCTTAAGCCGCTGCAAGAAGTGGAATGCTCAAGGTGGAAAGA GCAAGGCCTATTTTGCAAAGACAACAGATGACAGGTTCATCATAAAGCAAATCAAGAAAA CAGAGTTCGATTCATTTATTAAATTTGCACCTGATTACTTTAGGCATGTTTACCATTCTC TGGACACTGGAAGCCAAACTTGCCTTGCCAAGATATTAGGAATATATCAGGTTAAGCAGA TTAGACATGGCAAAGAGGTAAAGATCGACTTGATGGTGATGGAAAATCTTCTCTTTGGCC ACAATATTTCACGAATTTATGATCTCAAAGGTGTTACTTTTTCGCGACGCGTCACTGACT CAAATGATCATGATACTGTTTACCTGGACCAAAATTATGTTGAGGACATGGGTTTTTCTC CAATCTATATTGGTGGAAGAACAAAGCATCTTTTGCAGCGTGCAATATGGAATGACACGT CTTTCCTCACTTCGGTGAATGTCATGGACTATTCTCTACTTGTCGGAGTGGACAAAGAGA AGCATGAACTTGTGTTTGGCATCATTGATTATCTGAGGCAATATACTTGGGACAAACAAT TGGAAACATGGGTGAAGACTTCTCTGGTAGTACCCAAGAATGTTTCACCAACTGTAATTT CCCCCAAGGAATACAAAAAAAGGTTTAGGAAGTTCATGGCAAAGTACTTCCTGTCAGTTC CAGACACATGGAGCTCTGATAATTCATCTAATCCATGCAAATCCTTTGGTCAGAGCAATC ACAAGTTAGCGGAAGTCCACAATGGTGATAGCCTGCTTCAGCACCCAAATGAAGCTGAGG GGTGTGTCTAATCACGTGCAGGACTTCCTGGCATTTTTTAAGCCTATCCCATTGTTGTTT GGCTTTTCACTTTGTAAAATGGTGTACATTGGAGGACCTCACTGTTGATCTATCCAAAAG TTTGTGTTTTTAGGCAAATTGTTGGACAAGTGGGGTCCACAGGACATGTACCTATACAAA TGTTCATTGTTAATTTCACAATTATTATAGTGAAATTAAGAATTTGTATGATCATTTTTT GG