Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049715_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:41271800:41273024:-1 gene:Zm00001d049715 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 16 description:IAA25-auxin-responsive Aux/IAA family member

Sequence

ATGAAACTGAAACAGGAGCAAGCAGACGACGACTGCAGCAAGATGCAGGGAGGTCGTGGC
CTGATGAGCAGCCTTGAGCTCAGGCTGGGCATGTCTTCAGACAATGGCGACGCCAGCTGC
GGCGGTGATCCGTGGCTTGGCGTTGGAGTGCACCCCTGGAGCCTTGCCTCCAGACAAGCA
GAGAAGGTAGCCCTGGAGCAAGACCACCAGCAGCGTTCTCCGCCGCAGCCGGTGGGATGG
CCACCGGTGGGCGCGTTCCGCAGGAGCCACCTGCAGGTTTCTTCGAAGACCGTGGAGGAA
CCGGCGGGCAAGGTGAAGTCCGGCGGCGAGAGGCTGGCGCCGGCGGCCACCATGTTCGTG
AAGGTGAACATGGAGGGCTGCGCCGTCGGGAGGAAGGTGGACCTGCTGGCGCACCGCGGG
TACGCGTCGCTGTCGCGCGCGCTGCAGGCCATGTTCCGTGGCTTCCTGTCAGATGGTCAG
TGGAGGATCGTTGGCAGTGAGGACGACGCCGACGACGACAACGAGCAGCAGCCGGAGCCG
ACGAAGAAGGGGGGCAGTAAGAGCAACAAGAAGGCGTACATTCTTCTGTACGAGGACAAC
GAGGGCGACCGGATGCTCGTCGGCGACGTGCCGTGGGAGCTGTTCATGGCTTCGGTGAAG
AGGCTCTACATCGCACAGGACCCAAGGAAGACGAAGAATTAG

Peptide Sequence

PEP ID

Zm00001d049715_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:41271800:41273024:-1 gene:Zm00001d049715 transcript:Zm00001d049715_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 16 description:IAA25-auxin-responsive Aux/IAA family member

Sequence

MKLKQEQADDDCSKMQGGRGLMSSLELRLGMSSDNGDASCGGDPWLGVGVHPWSLASRQA
EKVALEQDHQQRSPPQPVGWPPVGAFRRSHLQVSSKTVEEPAGKVKSGGERLAPAATMFV
KVNMEGCAVGRKVDLLAHRGYASLSRALQAMFRGFLSDGQWRIVGSEDDADDDNEQQPEP
TKKGGSKSNKKAYILLYEDNEGDRMLVGDVPWELFMASVKRLYIAQDPRKTKN

Transcript Sequence

Transcript ID

Zm00001d049715_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:41271800:41273024:-1 gene:Zm00001d049715 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 16 description:IAA25-auxin-responsive Aux/IAA family member

Sequence

AAACACTCGCCTGCTCTGCACACACACCACACACACAGACACACTGACACACCCACACAC
TAGTTGTATGTGCTAGAGCTGCAGTTGGCTTGGCATCAGAGGCCATGAAACTGAAACAGG
AGCAAGCAGACGACGACTGCAGCAAGATGCAGGGAGGTCGTGGCCTGATGAGCAGCCTTG
AGCTCAGGCTGGGCATGTCTTCAGACAATGGCGACGCCAGCTGCGGCGGTGATCCGTGGC
TTGGCGTTGGAGTGCACCCCTGGAGCCTTGCCTCCAGACAAGCAGAGAAGGTAGCCCTGG
AGCAAGACCACCAGCAGCGTTCTCCGCCGCAGCCGGTGGGATGGCCACCGGTGGGCGCGT
TCCGCAGGAGCCACCTGCAGGTTTCTTCGAAGACCGTGGAGGAACCGGCGGGCAAGGTGA
AGTCCGGCGGCGAGAGGCTGGCGCCGGCGGCCACCATGTTCGTGAAGGTGAACATGGAGG
GCTGCGCCGTCGGGAGGAAGGTGGACCTGCTGGCGCACCGCGGGTACGCGTCGCTGTCGC
GCGCGCTGCAGGCCATGTTCCGTGGCTTCCTGTCAGATGGTCAGTGGAGGATCGTTGGCA
GTGAGGACGACGCCGACGACGACAACGAGCAGCAGCCGGAGCCGACGAAGAAGGGGGGCA
GTAAGAGCAACAAGAAGGCGTACATTCTTCTGTACGAGGACAACGAGGGCGACCGGATGC
TCGTCGGCGACGTGCCGTGGGAGCTGTTCATGGCTTCGGTGAAGAGGCTCTACATCGCAC
AGGACCCAAGGAAGACGAAGAATTAGCTAATTAAGCTAGTTAGGGCCTGGCTAGGAGAAA
CGTTGCTGGCTGCCTTATTATTTCTACAAATAGCTCCAAGTCGAAGCAGATAGCTAAGCT
AGCACTCCCTTCTTCGATCCTGTAATCCTGTCGAGCATCAGTTCATATACAGCGCGTGTA
GTCGGCATCTCTAGTCCAATATTAATATATAGGAAATTTTGCCTTGGACT