Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049709_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:4:41050235:41056101:1 gene:Zm00001d049709 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyneuridine-aldehyde esterase

Sequence

ATGGTAAAGGATGGCCAGAGGCCCTTTGACGTGTTCTCGGAGGAACTCCGGTCGGCGGAT
GTTTTCTTGCAAGAGTCACAGTTTCTAGTCTATGGAAATGGGAAGGACAAGCCTCCTACT
GGGCTGATGTTCGATAAGCAGCAGATCAAGGGGCTGTATTTCAACCAAACCCCTTCCAAG
GATATGGCACTAGCAGCGGTGTCCATGAGGCCTATCCCTCTAGCCCCAATCATGGAGAAG
CTCTCCCTCACCCCGGAGAACTACGGCTCCGTCCGTCGCTACTTCATCCAGGCACTCGAC
GACCACATGCTGTCGCCGGATGCCCAGGAGAAGCTGGTCCGCGAGAACCCTCCCGACGGC
ATCTTCAAGATCAAGGGCGGCGACCACTGCCCCTTCTTCTCAAAGCCGCAGTCCCTCAAC
AAGATCCTGCTGGAGATCGCGCAGATCCAAGCTCCTGCGGCGCTGCTCAAGGCGAGCTCC
CCCGAGGAGACCGCCGCCGCCATGGTGACAGGGCCAGCCAAGTCATGA

Peptide Sequence

PEP ID

Zm00001d049709_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:4:41050235:41056101:1 gene:Zm00001d049709 transcript:Zm00001d049709_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyneuridine-aldehyde esterase

Sequence

MVKDGQRPFDVFSEELRSADVFLQESQFLVYGNGKDKPPTGLMFDKQQIKGLYFNQTPSK
DMALAAVSMRPIPLAPIMEKLSLTPENYGSVRRYFIQALDDHMLSPDAQEKLVRENPPDG
IFKIKGGDHCPFFSKPQSLNKILLEIAQIQAPAALLKASSPEETAAAMVTGPAKS

Transcript Sequence

Transcript ID

Zm00001d049709_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:41050235:41056101:1 gene:Zm00001d049709 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyneuridine-aldehyde esterase

Sequence

TTATGTAACTCGTAGTATTTGGTCATTTACAATATGTGCTTAGGTGCCTTAATCTTCACC
TGTAAGAATTCTCGCTGGACAGTTCCTAGAGACTGTTAGTATGCTAGCGACTTTTCATAC
AGTTTTTTCTTGACTGAGGTGGTTGTTCAGTAGCATTCTGCTTTTAAAATCAGTACGTCA
CTATTGTGTGGGTACCTTGGACTGTCACTTGACTCCAACTTTGGCCTGGATGTATTGGTT
CATATGTAACTGCTCTTGGTTGATTTGTTGATTCATAATGTGGTTGTTAGTGTCGGACTT
CATGTGATTGGGTAAGTTCAATTAGTTGTCTGTGACGTACTTTTTGTTTGCCAAAGGAAT
TTTTTGTCCTTTTTACAAGGAAACTGTCCTAACTTTTTGAATTATTTCTCAATCAAACAT
GTTGTAATCCTCATAGATGTATAGGAGCAGCCTGCTTAGTGTCATCTGCATACTGCAGGA
TGGCCACTCCATTCTCAATATAAGCTGGCACTAATCCTTCAATCAGCTTGTTTTTCTGGG
CTAAACATATGATTTTAGCTAGGGTGTCAGCAGCAATGTTAAAGAGGAAGGGGGATAAAG
GATCCCCTTGTCTCACACCTTTCCCAGACTTAAAATAGTTGCCACAAGTATTATTTACTT
TAACACTTAATGTTCCAGAGGTCATCACCATCTTAATCCAATCATACCTTTTCTGACAGA
AGCTTCTCTTCTTGAGATATTCGAAAAGGAAGTTTCAACTGATTTTATCATAAGCTTTTT
CAAAATCAAGTTTCAGCACCACTCCATATTTCTTCTTAACTCTAGTGTCATGACGAATCT
CATGAAGTGCCATCACCCCATCCATGACATTTATATCATTAAAGAAACTAGATTGACTTT
TACTAATGATTTTCCCCATAACCTTCAGCCTTGGTAAAGATCTTAGAGATCACATTTAAC
AGACATATAGGTCTGTATTTGTTATGGTCGCTAGATCAGTGAGGGATTTGAGAAGGGTAT
CGATGGGCAGGAACGTCGGCCGGGGCCCTCTACCCACGGTCGAGCAAGAGGAGGGTTTCT
CCCCTCTAATTCTTGCCTACTTTATTTCTCAATTCTCATCCATTGATTACATAAATAGGC
CGGCCGGCCGCCCCTGTCTAGCTAGAGATCCTGATCTCCTTAAAACTCTCCTAAAAACTC
TCAACAAACTAACTGATAACCTTTCTAGATAATCTCAACTAATCTCCTAAATAATCTCAA
CTAATCTTCTAATCTTATCTCTAACTATCCTTATCTAATCCCCTTGGAGGGCCTATGGCT
GCTGCTGCTGCTGCAGCCCCTCCGTGGGCCTCCTTAGGCCCTGACAGTATTGCTGTATTT
TTATTAGCTTCCTTAAAGGGCGTACCCAGTAATTTTTAAAAAATTAGGTAATGATGCCAT
AGTTAAACCTACAAATGTCCAACTTCAAATTTTAAAAATCTTTGAACAGAAGCATCAATC
CCCATCTTAGCAGCAAGAGATATTATAGTGGAATTATTAAGAACTGCAAAGGAGTTCTGA
TTATTTGGGTTGTTGAGTTGCAGTTTCCTTGTTCCCTTTGTTCTTCAGTTGGTCATCAAT
CATCAAGTGCTACTCCCCATTATCCCTGACCTCTTACTCATCCTCACTTCTCGCCATTCA
TTCATGGGATGATGGTTGACTCCTTGCTGGGCCTCCATCTCTAACTTCTTTGTATTGATC
TGATCTAGTGATCTTTCAACCCATCAACAGTTTCAGCATTAGACTCTTGTTCGACTTGAA
TACCAGCTTCCTGACTTTCCATCCCCACTTGAGATATTTTCTGATTTTCATTTGCCTTGT
TCCACTCCAGGTTGAACTTATACTGCAAATCAACCTTTCTGGATGGAATATCCCCACAGA
CCTTTGCCCATTTTTCTTTGGCAGTCTCAGCTATCATGATAAAACACTTAAAAACCTGTT
GGTTCTCAACACCCTTAGCCGCAGAAGTGGTTACTTGTATCACCTTGACACTCTCCTCTT
GACCTGATAGTTCTACGACGGGGGCTTCTTGGCACCCTTTTTGGGGACTCAAAGATATTG
CCCTCCCAGTAGTGACTTCCTGTTCTCTCTCTTCCACTATATCATCTAGTCCTTTACTGA
AAAGCTTGTGATTTCCAGTCTCAAACTGAAAGATACCAGAACTATTGAGTCTTGATACTG
CGTAAAGCATTTTTTGCCTCTATAGCAGCAAGGAGATCATATTTAGACTTTATCAGATTA
GATCCATGCTCATTAATTACCATAGGGTTTTCGGAGAAGCTCATACAGCTGTTTTTTCTG
ATCTAAATCTGATCAAAAGAATCAAATCTGAGTTCTTCAGTTCCAGGGACAATTAGATCT
TCTATCAGCAAACCTTGATCCTCACTTTCATCTTCCAGATGCCCATCTTGGTGCTGTGTC
CCTTGATTCTAACTTGCTTACCCTTTACAGACACAGCATTTTTGCTACATCCAGCTTTTG
TTTCTTAGGAGATGGAAACTCATACTTTGCTTTATCCTCCTCATTTCCGATCCATTGATT
TCCAGCATGGTTTGGAAACCTCCCTCTGAAAGAATTAATCATAGAAATGGAAGTCCAGCA
GTCCATCAACGTTGGCAGGGGCCAGAGTAACATATCTGCAGCCAATGTTAACTCTAACAT
AATCATATCTATTCAGATTTTTCTTATCCACCTCCAAAGGTAATCCCACCTTGGATGCCA
CCATACACACATTAGGAGAAGATCTCTTTCAGAAGGGATTCCTGTGATCCTGAACCAAGC
CAGATCCAGGGCTCCTTTAGAACTAATAGCAGGATTCCACTTCTCAACTCTAGACCCCAC
AGAAGGCATATGCCTCATTTGCATTTCTGTGAAAAAAAGTCAAATCCTCAATGGTTTTAG
AGTTTGAGAACCTCATCCGGACCTTGTTTATTTTAACTTTTTTAGCATACCACTTCCATG
TCGATGTTGGGCCAGCTTTAACTTTGAACTCGTTCTCTATTTGCCTAGCAGAAACTTCCC
CAGCAGTAATGGTAATGAAGGCTCAATCAGACAGACATGTATTTGATACCCTCATCAGAT
GTAGTACTTTCAATAACATGGAAATCTTGACCATGAGCGGACAACCCACGGAAAGGGGAG
ATAAACACCCATGGCATCTTAGTCATGCAAACTCTACTCTAGGCAGATGCCCCTCCTTGT
TGTACCTTGAACATATCACAGGATTTGAGCAACCTCCAGCGATATGCCCCACTTACCACA
TCTAGGACATATGTTCTCTCCAACCCTGGGCTCGTCTCTTTTCACTTCTCTGTCCACCAT
CTCAACCACTCTGTTTTCCAATCCTTCAGTAGTGACTACCTGATTAGCGTTGTTCACAGA
CGCATCAGCATCAGCAGCTCCATCATTCACCTCCAAGTGAGCCTCCACTGCAGGCCCCAA
TTGTTCTGGAGAATTTGGAAACAAAGAAAATTGTCCTTGTTCATGGAGAAGGGTTCGGTG
CTTGGTGTTGGTACAAGACCATCTCACACTTGGAGGAAGCTGGTCTAGATCCTGTTGCCT
TAGATCTCACAGGCTCTGGCATAGACCATACTGATACAAACAGCATAGCTACGTTAGCAG
ATTACTCCAAGCCATTGATTGATTACCTCGACAGACTTCCTGAAGATGAGAAGGTCATTT
TGGTCGGCCATAGTTGCGGAGGTGCGAGTGTCTCGTATGCACTGGAGCAGTACCCCCGAA
AGATCTCAAAGGCGGTGTTTCTTACTGCTACAATGGTAAAGGATGGCCAGAGGCCCTTTG
ACGTGTTCTCGGAGGAACTCCGGTCGGCGGATGTTTTCTTGCAAGAGTCACAGTTTCTAG
TCTATGGAAATGGGAAGGACAAGCCTCCTACTGGGCTGATGTTCGATAAGCAGCAGATCA
AGGGGCTGTATTTCAACCAAACCCCTTCCAAGGATATGGCACTAGCAGCGGTGTCCATGA
GGCCTATCCCTCTAGCCCCAATCATGGAGAAGCTCTCCCTCACCCCGGAGAACTACGGCT
CCGTCCGTCGCTACTTCATCCAGGCACTCGACGACCACATGCTGTCGCCGGATGCCCAGG
AGAAGCTGGTCCGCGAGAACCCTCCCGACGGCATCTTCAAGATCAAGGGCGGCGACCACT
GCCCCTTCTTCTCAAAGCCGCAGTCCCTCAACAAGATCCTGCTGGAGATCGCGCAGATCC
AAGCTCCTGCGGCGCTGCTCAAGGCGAGCTCCCCCGAGGAGACCGCCGCCGCCATGGTGA
CAGGGCCAGCCAAGTCATGACTGCATGTATGTAGTGTACACGAAAAGAGAAATGAGTAAG
CACATAGGTTGCAAAAGGGAGGGGGAGGAGGTCTGGGGATTAACTGAAGCCAAGCTGTGT
CGGATAATAATGTAGGGAGGTCAAAGTGTTTCTTTCTTTCTTCTGTGATCAGATCAGATC
ATATAGAGAATGAGAGGTGGTCAGCAGATAATTGCATTTCTTTTTTCCTTTTTACCTTGT
GAATGAATGAGATATTCAGTGACCAATGTCAACGCGGAAAGCCTTTGTGGTGATGCT