Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049648_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:38697693:38701745:-1 gene:Zm00001d049648 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STICHEL-like 2
Sequence	ATGGATTCGTCGGTGGAGGTAGCAGGAGTCCGCAGCAACAAGATGATTGATGGCAGGCGG CATTCGGTGGACATCCCCGTCTCGAGGGCCCTGTTGGCCATCATGCGGTCCAGATCCCTG AGGGACCCGGACACCAACTCACTGGCCAAGTTCTCCGCCAAGAAAACCATCTGGGAGGGC AGCTCCCTCGACGAGGACGAAATGGAGGGGGCGAACAACAAGAATGCCTACGGCAGGCAC AGCTTCAGCTACAACGCAATCAGCAAATCAGTGACACATGAGCTGATAGGTGATGTGTCA GACGATGAATTGCTTGATCTTCTCAATCTGGCCATGTCATCAGATGCTGCTACAATTGTG AGGAGGGCCAGGGAGCTTTTGAGCTCAAAAGTCGACCCTTTGCAGCTATTAGCTCAGCTT GCGAATCATATCATGGATATTTTAGCTGGGAAGCACCCGTCAGATTCTTCAGAAGTTAGA AGAGTTACCGGCAAACATACATCTGCTGATGTGGATGTACACAAACTTAGGAATGCATTG GAAATACTCTCTGAAACTGAAAAGCAATTGAAGACCACAAAAAACCAGTCTACATGGCTC ACTGCTGCACTGTTACAGTTTAATATGAGAGAACCCTACTGTCTAGATGATACTGCGGTT TCAAGCATGTTTACTGAAAGTCATACAGATGATGGGACTGCAGCACTGAAAGATGAAAGC TTAGACACGAGTTCCCATCTTTGTTCCCAGAACAAAATCAGTTCTCTAGACATGAATCTG GGAGATCCAGATGTACTGGAGACGATATGGATGAAAGCTCTTGAAAACTGCTCGTCCCCT CCACTTCAAAATCTACTACTCAAGGATGGAAAGCTGTCATCTCTGTACACAACCCAAGGT GTGGCGGTTGCTGAGCTACAGTTCTGCCATCCTGAGGTTGTCCCAACGTCAAAGAACTTC TGGAAGCCACTATGTGCATCTCTGCAGAATCTGCTGAGGTGCAGCGTCGACATCCGAATC AACCTATCTCCTATCTCCGGCAACGGGGCGGGATCCAAGGACTCGTCCGTCAGCCTTGTC ATGGAGTCAAGAGAAGAAGACCGCGAGGCACAGGACCCAGCCACCTCAAACTGCAGAACC GTGGTGTCATCCGGGAGAGACTGCCCTTCCCCACCCTTGGGGCAGGCCAAGGAGAGATCG TCCCACATCCTGGGGTGCCTCCATGGCGGCGCGGGTGGCGACGCCGTGGACACCGAGCCG AGGATCCTGAGCTACCAGAAGATCTCCGTTGTCCCTGCAGCATCCACCCCAGGAAACACT CCCCTGAAAGCCGCTGCCGCCGCTGCCGGAGACGAGTCAAAGGTTGATGATGGCGGGGTT CGTCCTGGCTGCTGCTCGCACATTTTACCCTGTGGTGCTTGCGCTCCCCGTCAGAAGCCC CGGACGCGGGAGAAACGCCGTGCCAAGCTGTTCAGCTGCTGCTTCTGCAAGATCGGACCG GACTGCAAGGCGAAGGGGGAAGCAGGGTAG

Peptide Sequence

PEP ID	Zm00001d049648_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:38697693:38701745:-1 gene:Zm00001d049648 transcript:Zm00001d049648_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STICHEL-like 2
Sequence	MDSSVEVAGVRSNKMIDGRRHSVDIPVSRALLAIMRSRSLRDPDTNSLAKFSAKKTIWEG SSLDEDEMEGANNKNAYGRHSFSYNAISKSVTHELIGDVSDDELLDLLNLAMSSDAATIV RRARELLSSKVDPLQLLAQLANHIMDILAGKHPSDSSEVRRVTGKHTSADVDVHKLRNAL EILSETEKQLKTTKNQSTWLTAALLQFNMREPYCLDDTAVSSMFTESHTDDGTAALKDES LDTSSHLCSQNKISSLDMNLGDPDVLETIWMKALENCSSPPLQNLLLKDGKLSSLYTTQG VAVAELQFCHPEVVPTSKNFWKPLCASLQNLLRCSVDIRINLSPISGNGAGSKDSSVSLV MESREEDREAQDPATSNCRTVVSSGRDCPSPPLGQAKERSSHILGCLHGGAGGDAVDTEP RILSYQKISVVPAASTPGNTPLKAAAAAAGDESKVDDGGVRPGCCSHILPCGACAPRQKP RTREKRRAKLFSCCFCKIGPDCKAKGEAG

Transcript Sequence

Transcript ID	Zm00001d049648_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:38697693:38701745:-1 gene:Zm00001d049648 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STICHEL-like 2
Sequence	ATGGATTCGTCGGTGGAGGTAGCAGGAGTCCGCAGCAACAAGATGATTGATGGCAGGCGG CATTCGGTGGACATCCCCGTCTCGAGGGCCCTGTTGGCCATCATGCGGTCCAGATCCCTG AGGGACCCGGACACCAACTCACTGGCCAAGTTCTCCGCCAAGAAAACCATCTGGGAGGGC AGCTCCCTCGACGAGGACGAAATGGAGGGGGCGAACAACAAGAATGCCTACGGCAGGCAC AGCTTCAGCTACAACGCAATCAGCAAATCAGTGACACATGAGCTGATAGGTGATGTGTCA GACGATGAATTGCTTGATCTTCTCAATCTGGCCATGTCATCAGATGCTGCTACAATTGTG AGGAGGGCCAGGGAGCTTTTGAGCTCAAAAGTCGACCCTTTGCAGCTATTAGCTCAGCTT GCGAATCATATCATGGATATTTTAGCTGGGAAGCACCCGTCAGATTCTTCAGAAGTTAGA AGAGTTACCGGCAAACATACATCTGCTGATGTGGATGTACACAAACTTAGGAATGCATTG GAAATACTCTCTGAAACTGAAAAGCAATTGAAGACCACAAAAAACCAGTCTACATGGCTC ACTGCTGCACTGTTACAGTTTAATATGAGAGAACCCTACTGTCTAGATGATACTGCGGTT TCAAGCATGTTTACTGAAAGTCATACAGATGATGGGACTGCAGCACTGAAAGATGAAAGC TTAGACACGAGTTCCCATCTTTGTTCCCAGAACAAAATCAGTTCTCTAGACATGAATCTG GGAGATCCAGATGTACTGGAGACGATATGGATGAAAGCTCTTGAAAACTGCTCGTCCCCT CCACTTCAAAATCTACTACTCAAGGATGGAAAGCTGTCATCTCTGTACACAACCCAAGGT GTGGCGGTTGCTGAGCTACAGTTCTGCCATCCTGAGGTTGTCCCAACGTCAAAGAACTTC TGGAAGCCACTATGTGCATCTCTGCAGAATCTGCTGAGGTGCAGCGTCGACATCCGAATC AACCTATCTCCTATCTCCGGCAACGGGGCGGGATCCAAGGACTCGTCCGTCAGCCTTGTC ATGGAGTCAAGAGAAGAAGACCGCGAGGCACAGGACCCAGCCACCTCAAACTGCAGAACC GTGGTGTCATCCGGGAGAGACTGCCCTTCCCCACCCTTGGGGCAGGCCAAGGAGAGATCG TCCCACATCCTGGGGTGCCTCCATGGCGGCGCGGGTGGCGACGCCGTGGACACCGAGCCG AGGATCCTGAGCTACCAGAAGATCTCCGTTGTCCCTGCAGCATCCACCCCAGGAAACACT CCCCTGAAAGCCGCTGCCGCCGCTGCCGGAGACGAGTCAAAGGTTGATGATGGCGGGGTT CGTCCTGGCTGCTGCTCGCACATTTTACCCTGTGGTGCTTGCGCTCCCCGTCAGAAGCCC CGGACGCGGGAGAAACGCCGTGCCAAGCTGTTCAGCTGCTGCTTCTGCAAGATCGGACCG GACTGCAAGGCGAAGGGGGAAGCAGGGTAGTTTGCAGCAGATTAGGGACAGAGCAATCCT CTGCTGTTAGTTCAAGCTGGAGATGGGGGCAGTAGTTCAGACTGTCAAGTGTGACCACCT GTTTACTGTAGCTCGCCTCCGATGGGGTGGTCAAAGACACAGTTACATGTGCATCGGTCG CTAACATAAAGGTTATTTTGTAGTCGGATGCTTAAATTTTCTTGGTAGCATACCATATTT ATAATTGTATGTTTGATGGCGCGCGTTAGTTTTACCGAAAGCTTAAATGGACAGGTCTCG CTATTTAAGGATAATTT