Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049643_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:4:38580342:38581622:1 gene:Zm00001d049643 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc finger (C3HC4-type RING finger) family protein
Sequence

ATGAACCTCCGGCCAGGCCGGTTGGGTGTGGCGTCGAGGTACCAGTGCGTCTTTGGCCGT
GATCTGTGGAAGCCAAAGCAGCGTGTGCTCACGTCCCCTGTGATTTCTGCCGCACAAGAG
GTTTTCCGGTGCGTGACTCCAGCTCGCGTTCGCCGGCACCTCAGGATGACAACTGATCCC
AACGGCAATGGCAATGGCAATGACAAGCCGATGTTGGTCTCCATCAGAACGAAGGGGCAG
AGGGACTCCACGCTGCCCTCGATCGCTGAACCTGAGCCACTTCCTCCTCGGCACAACTAC
AGGCATCATCGACGACGGCCAAAGGCGCACTCAATGTGCGTGTGCACCATGCTCCGCAAC
CAGGCGAGGTTCCTCAGGGAATGGATCATCTACCACTCGCGCATCGGCGTGGAGCGGTGG
TTCATCTACGACAACAACAGCGACGACGGCATCGAGCAGGTCCTCGGCACCATGGACCCG
TCGACGCACAACGTGACGCGCCACCTGTGGGACAGCCTGCCACAGCTTCGGGCCCTCGGG
GCGGACCAGAATCCCCAAGCAAGGCGTGACGACGGGCTACACCTGCCGGCTCGCCGCGCC
GGAGCGCCACAAGTCGATCGTGAGGCCCGACGCGCTGAACCCGTCGCTCGTCAACGTGGT
GCACCACTTCCACCTGAGGGAAGGCGCGAGGTACGTGAACGTCGGGCAGGGCGCCATGCT
CGTCAACCACTACAAGTACCAGGTCTGGGAGGTGTTCAAGGACAAGTTCTCCGGGCGCGT
CGCGACCTACGTCGCCGACTGGCGGGACGAGGAGAACGTCGGGTCCAGGGACAGGGCGCC
GGGGCTGGGGACTAG

Peptide Sequence

PEP ID

Zm00001d049643_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:4:38580342:38581622:1 gene:Zm00001d049643 transcript:Zm00001d049643_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc finger (C3HC4-type RING finger) family protein
Sequence

MNLRPGRLGVASRYQCVFGRDLWKPKQRVLTSPVISAAQEVFRCVTPARVRRHLRMTTDP
NGNGNGNDKPMLVSIRTKGQRDSTLPSIAEPEPLPPRHNYRHHRRRPKAHSMCVCTMLRN
QARFLREWIIYHSRIGVERWFIYDNNSDDGIEQVLGTMDPSTHNVTRHLWDSLPQLRALG
ADQNPQARRDDGLHLPARRAGAPQVDREARRAEPVARQRGAPLPPEGRREVRERRAGRHA
RQPLQVPGLGGVQGQVLRARRDLRRRLAGRGERRVQGQGAGAGD

Transcript Sequence

Transcript ID

Zm00001d049643_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:38580342:38581622:1 gene:Zm00001d049643 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc finger (C3HC4-type RING finger) family protein
Sequence

TGTTCGCCAAGGGGATGAACCTCCGGCCAGGCCGGTTGGGTGTGGCGTCGAGGTACCAGT
GCGTCTTTGGCCGTGATCTGTGGAAGCCAAAGCAGCGTGTGCTCACGTCCCCTGTGATTT
CTGCCGCACAAGAGGTTTTCCGGTGCGTGACTCCAGCTCGCGTTCGCCGGCACCTCAGGA
TGACAACTGATCCCAACGGCAATGGCAATGGCAATGACAAGCCGATGTTGGTCTCCATCA
GAACGAAGGGGCAGAGGGACTCCACGCTGCCCTCGATCGCTGAACCTGAGCCACTTCCTC
CTCGGCACAACTACAGGCATCATCGACGACGGCCAAAGGCGCACTCAATGTGCGTGTGCA
CCATGCTCCGCAACCAGGCGAGGTTCCTCAGGGAATGGATCATCTACCACTCGCGCATCG
GCGTGGAGCGGTGGTTCATCTACGACAACAACAGCGACGACGGCATCGAGCAGGTCCTCG
GCACCATGGACCCGTCGACGCACAACGTGACGCGCCACCTGTGGGACAGCCTGCCACAGC
TTCGGGCCCTCGGGGCGGACCAGAATCCCCAAGCAAGGCGTGACGACGGGCTACACCTGC
CGGCTCGCCGCGCCGGAGCGCCACAAGTCGATCGTGAGGCCCGACGCGCTGAACCCGTCG
CTCGTCAACGTGGTGCACCACTTCCACCTGAGGGAAGGCGCGAGGTACGTGAACGTCGGG
CAGGGCGCCATGCTCGTCAACCACTACAAGTACCAGGTCTGGGAGGTGTTCAAGGACAAG
TTCTCCGGGCGCGTCGCGACCTACGTCGCCGACTGGCGGGACGAGGAGAACGTCGGGTCC
AGGGACAGGGCGCCGGGGCTGGGGACTAGGCCGGTGGAGCCGGAGGACTGGCCGCGCCGG
TTCTGCGAAGTGTACGACACCGGGCTTAAGGATTTCGTGCAGAAGGCGTTCGCAGACCCG
GCCACTGGAAGCCTTCCATGGTAGATGATGGGGGTATACATACAGAGAGACAGGGAATTA
AGAAACAAGTAAACGAAAAGGATAGGTAGAAGAGTGGTTTGCTCTCTGTTAGTCATTTGA
GGTTTTCTTTTTTTTCCCCTGTTCT