Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049641_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:4:38551788:38553836:-1 gene:Zm00001d049641 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glyceraldehyde-3-phosphate dehydrogenase1 description:Glyceraldehyde-3-phosphate dehydrogenase 1%2C cytosolic

Sequence

ATGTTTGTTGTTGGTGTCAATGAGGACAAGTACACCTCGGATGTTAACATTGTTTCCAAT
GCTAGCTGCACCACAAACTGCCTTGCTCCCCTTGCTAAGGTCATTCATGACAACTTCGGC
ATTGTTGAGGGTTTGATGACAACTGTTCATGCCATCACTGCCACCCAGAAAACTGTTGAC
GGACCCTCAGCCAAGGACTGGAGAGGTGGCAGGGCTGCCAGCTTTAACATCATTCCTAGC
AGCACCGGTGCTGCCAAGGCTGTTGGTAAAGTTCTTCCTGATCTGAATGGCAAGCTCACT
GGTATGTCCTTCCGTGTTCCTACTGTGGATGTCTCGGTTGTTGACCTCACCGTCAGAATC
GAGAAGGGGGCCTCCTATGAGGATATCAAGAAAGCTATTAAGGCTGCTTCCGAGGGTCCA
CTCAAGGGTATCATGGGTTATGCGGAGGAGGATCTGGTTTCTACCGACTTCCTTGGTGAC
AGCAGGTCGAGCATCTTCGACGCCAAGGCCGGGATCGCTCTGAACGACCACTTCGTCAAG
CTCGTCTCGTGGTACGACAACGAGTGGGGCTACAGCAACCGCGTCGTCGACCTGATCCGC
CACATGTTCAAGACCCAGTAG

Peptide Sequence

PEP ID

Zm00001d049641_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:4:38551788:38553836:-1 gene:Zm00001d049641 transcript:Zm00001d049641_T007 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glyceraldehyde-3-phosphate dehydrogenase1 description:Glyceraldehyde-3-phosphate dehydrogenase 1%2C cytosolic

Sequence

MFVVGVNEDKYTSDVNIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVD
GPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRI
EKGASYEDIKKAIKAASEGPLKGIMGYAEEDLVSTDFLGDSRSSIFDAKAGIALNDHFVK
LVSWYDNEWGYSNRVVDLIRHMFKTQ

Transcript Sequence

Transcript ID

Zm00001d049641_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:38551788:38553836:-1 gene:Zm00001d049641 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glyceraldehyde-3-phosphate dehydrogenase1 description:Glyceraldehyde-3-phosphate dehydrogenase 1%2C cytosolic

Sequence

CAGGAACCCTGAGGAAATCCCGTGGGGTGAGGCTGGCGCTGAGTATGTCGTGGAGTCCAC
CGGCGTCTTCACTGACAAGGACAAGGCTGCTGCACATCTCAAGGGTGGTGCCAAGAAGGT
TGTTATCTCTGCCCCAAGCAAAGACGCACCCATGTTTGTTGTTGGTGTCAATGAGGACAA
GTACACCTCGGATGTTAACATTGTTTCCAATGCTAGCTGCACCACAAACTGCCTTGCTCC
CCTTGCTAAGGTCATTCATGACAACTTCGGCATTGTTGAGGGTTTGATGACAACTGTTCA
TGCCATCACTGCCACCCAGAAAACTGTTGACGGACCCTCAGCCAAGGACTGGAGAGGTGG
CAGGGCTGCCAGCTTTAACATCATTCCTAGCAGCACCGGTGCTGCCAAGGCTGTTGGTAA
AGTTCTTCCTGATCTGAATGGCAAGCTCACTGGTATGTCCTTCCGTGTTCCTACTGTGGA
TGTCTCGGTTGTTGACCTCACCGTCAGAATCGAGAAGGGGGCCTCCTATGAGGATATCAA
GAAAGCTATTAAGGCTGCTTCCGAGGGTCCACTCAAGGGTATCATGGGTTATGCGGAGGA
GGATCTGGTTTCTACCGACTTCCTTGGTGACAGCAGGTCGAGCATCTTCGACGCCAAGGC
CGGGATCGCTCTGAACGACCACTTCGTCAAGCTCGTCTCGTGGTACGACAACGAGTGGGG
CTACAGCAACCGCGTCGTCGACCTGATCCGCCACATGTTCAAGACCCAGTAGAGGGGTTT
TTTCCCCCTGCTTCTCATGGATGGT