Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049628_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:38071061:38075846:1 gene:Zm00001d049628 gene_biotype:protein_coding transcript_biotype:protein_coding description:Electron carrier/ iron ion binding protein
Sequence

ATGCCGGACGTGAAGTCCGCTGCTGCCACGGTCGCCAAGGCAGTGGCTGGTGACTCTCCT
TCCCCTGCTGCTACTCCTCCTGCGCCGGCCGTCGCCAGCAGCAATGGGACACCGCAGAAG
CCGCCTCCTATTCCAGCTGCCACCTTCGACATGCCCAAGCCAAACCTTCGTGGTCTTAAC
AAGCCCAAGTGCATCCAGTGTGGTAACGTTGCCCGCTCCAGGTGCCCATTCCAATGTTGC
AAGAGCTGCTGCTACAAGGCTCAGAATCCTTGTCACATCCATGTCCTGAAGCAGAGCAAC
ACATTGCCAGATAAGCCATCACCTGCTACTGCTTCTTCAACAGAACAGCCATCTACCAAT
TTACCCGCAACCAGTTCAGCATCAAGGCTAGCTGCCTTGCAAAAGCTTCCTCAGCATTTT
CTGAAGTCTCTCCAAACAAAGAAGTCGCTTACGAAAAAGGATGCCGTGGCTATAAACAAG
TGGAGGTTTATGAAGCTAAGGGAACATATGCAAGGCGATATCGATGATGAAAACGAAGCA
TATGAGAGGTATACACAGAATGTTAGGTTACTGGAGGAAACATTCTATCCCATGGAATAC
GCTGATGTCGAGCCTGAAGCCGAAGCACCTTCTTCAGACGAAGAAAGGATGGACTTGCTG
GTTTCGGAGGCAAAGGTGAGGCTGAAGTCGGATAACGAAATCGCTGATCGCTTCAAGGAG
AGGGTCGCCGCCATCTTGGACCAGAAGCTGAAAAAACTGCTCGAGAGCCAAAGCGCCGAC
GAGGACGACAAACTGTCCGATCCAGACCAGGACGATCATCTAAACCCGGCGAAGTTCAGC
GCGAAGCAGAAGGCAGAGAGAAGCGCGAGCTTAAACGAGCTGCTCGGTAAGCTGACACGG
GCACGGAGCGAGGACGACCTGAAGCCGTGCCGCGATCTCATCGAGCAGCTGTTTGGGAAG
GAGAAGGGCTCCTCTACTGACAGGCAAGCTGGAGTGGAGATGGAGCAGAGAGATCAAGAG
TCAGCCGCAGCAGCAGTAGCACAGCCTTACTCCGTCCCAGAGTTGTGCGCTAGGATGGAG
GTTGATGAGGACTTTGCCGCAAAGATTAGTGATGAGTTCTCGTTGAGTCAGGTGGCGCAG
CTATGA

Peptide Sequence

PEP ID

Zm00001d049628_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:38071061:38075846:1 gene:Zm00001d049628 transcript:Zm00001d049628_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Electron carrier/ iron ion binding protein
Sequence

MPDVKSAAATVAKAVAGDSPSPAATPPAPAVASSNGTPQKPPPIPAATFDMPKPNLRGLN
KPKCIQCGNVARSRCPFQCCKSCCYKAQNPCHIHVLKQSNTLPDKPSPATASSTEQPSTN
LPATSSASRLAALQKLPQHFLKSLQTKKSLTKKDAVAINKWRFMKLREHMQGDIDDENEA
YERYTQNVRLLEETFYPMEYADVEPEAEAPSSDEERMDLLVSEAKVRLKSDNEIADRFKE
RVAAILDQKLKKLLESQSADEDDKLSDPDQDDHLNPAKFSAKQKAERSASLNELLGKLTR
ARSEDDLKPCRDLIEQLFGKEKGSSTDRQAGVEMEQRDQESAAAAVAQPYSVPELCARME
VDEDFAAKISDEFSLSQVAQL

Transcript Sequence

Transcript ID

Zm00001d049628_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:38071061:38075846:1 gene:Zm00001d049628 gene_biotype:protein_coding transcript_biotype:protein_coding description:Electron carrier/ iron ion binding protein
Sequence

GCCCGAGCCCAGAGTAGGGTTTCGGGCTTTTCGTCTTCTCTTTCGTCCTCTTCTTGTTGC
GCGCCATCCGATCGCCGCTGCCAGGTCGTGTCCTTTCTCGTCGCCGGCAAGGCCTCCTCC
CACCCAATTTCCTTGACGAGAGGCGCTGCTCGGTTCCCCGGACCTCACCTGGGGCCTGCC
TGGCGTCCATTTTAGCCTAAAATAGGCTTAAATAGTCAGATTTTGAGCACCCAATCTCGA
TAAAGAAAGCCCCAAAGAGGCAATAGCCAGCTGCCAGCCCTAGTACGACGACGTGCCGCC
GCCAGCTGCCTCTGCGCGAAGACGACGCGCCGCCGTAGAGTTGCCCAGGCCCGCTGACTC
CCGATCTGCATCTCTCGGACTGCCCGACGCCTTGCGGCTGCGGACGCCTTTCGCTGTGCG
GGCTGCGTCCAGTGGAACGTCACCTCTCCCAGCGCGGGACGCGCCTCCAGGCTCCAGCGG
AGCTCGACAGGCCGGCAGTTGACCCCTTGCCAACTGGCTCCTGGACTCCTGTTTTGCTGG
GTTGAGGAGAACCATGCCGGACGTGAAGTCCGCTGCTGCCACGGTCGCCAAGGCAGTGGC
TGGTGACTCTCCTTCCCCTGCTGCTACTCCTCCTGCGCCGGCCGTCGCCAGCAGCAATGG
GACACCGCAGAAGCCGCCTCCTATTCCAGCTGCCACCTTCGACATGCCCAAGCCAAACCT
TCGTGGTCTTAACAAGCCCAAGTGCATCCAGTGTGGTAACGTTGCCCGCTCCAGGTGCCC
ATTCCAATGTTGCAAGAGCTGCTGCTACAAGGCTCAGAATCCTTGTCACATCCATGTCCT
GAAGCAGAGCAACACATTGCCAGATAAGCCATCACCTGCTACTGCTTCTTCAACAGAACA
GCCATCTACCAATTTACCCGCAACCAGTTCAGCATCAAGGCTAGCTGCCTTGCAAAAGCT
TCCTCAGCATTTTCTGAAGTCTCTCCAAACAAAGAAGTCGCTTACGAAAAAGGATGCCGT
GGCTATAAACAAGTGGAGGTTTATGAAGCTAAGGGAACATATGCAAGGCGATATCGATGA
TGAAAACGAAGCATATGAGAGGTATACACAGAATGTTAGGTTACTGGAGGAAACATTCTA
TCCCATGGAATACGCTGATGTCGAGCCTGAAGCCGAAGCACCTTCTTCAGACGAAGAAAG
GATGGACTTGCTGGTTTCGGAGGCAAAGGTGAGGCTGAAGTCGGATAACGAAATCGCTGA
TCGCTTCAAGGAGAGGGTCGCCGCCATCTTGGACCAGAAGCTGAAAAAACTGCTCGAGAG
CCAAAGCGCCGACGAGGACGACAAACTGTCCGATCCAGACCAGGACGATCATCTAAACCC
GGCGAAGTTCAGCGCGAAGCAGAAGGCAGAGAGAAGCGCGAGCTTAAACGAGCTGCTCGG
TAAGCTGACACGGGCACGGAGCGAGGACGACCTGAAGCCGTGCCGCGATCTCATCGAGCA
GCTGTTTGGGAAGGAGAAGGGCTCCTCTACTGACAGGCAAGCTGGAGTGGAGATGGAGCA
GAGAGATCAAGAGTCAGCCGCAGCAGCAGTAGCACAGCCTTACTCCGTCCCAGAGTTGTG
CGCTAGGATGGAGGTTGATGAGGACTTTGCCGCAAAGATTAGTGATGAGTTCTCGTTGAG
TCAGGTGGCGCAGCTATGAATCTGGAACCCGGCCTTCGATGAGTTCTCGTTGAGTCAGGG
GGATGCAATGTTATTATCACTGAGCTCCTTCGATGTGTACCAACTCAACAGCGCTATCCA
TCGACGTGCTGGCCTGTCATTTAGGTGTTGTTGTTTGGTTACGACTAGTAAATGTAAATG
TTAGAACCCCGATGAGCAGATGAGTTGAGCACCGCTCCCGGCGCTCGACTTCCTCTCACG
AAG