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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049625_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:4:37976398:37977580:-1 gene:Zm00001d049625 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LSD1
Sequence

ATGCTTGGGCCGGCGATGTCTGAGCTCGTGTGTGGCGGCTGCTTCACCATGCTGGTGCAC
TCCCGCAGCGCAACTAACGTACGGTGCCCTCACTGCGGCAGGCTCGGCTCGACAAGATCA
GGAAACCAGATGGGGCACCTGTCGTGCGGGCAATGCCGGACAACCCTGGCATACCCGCCG
GGAGCGACGACAGTCGGGTGCCCGACATGCCGCAACGTCAATCCAGTTCCAACCAGGGAT
GCTCGGCCGCAGCAGACGATGGTTCTGGTGGAGAATCCTAAGACGCTGGATGAAAAGGGC
AAACTGGTGAGCAGTGTTGCCGTTGGTGTCACCTCGTGGAAAAGATGA

Peptide Sequence

PEP ID

Zm00001d049625_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:4:37976398:37977580:-1 gene:Zm00001d049625 transcript:Zm00001d049625_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LSD1
Sequence

MLGPAMSELVCGGCFTMLVHSRSATNVRCPHCGRLGSTRSGNQMGHLSCGQCRTTLAYPP
GATTVGCPTCRNVNPVPTRDARPQQTMVLVENPKTLDEKGKLVSSVAVGVTSWKR

Transcript Sequence

Transcript ID

Zm00001d049625_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:37976398:37977580:-1 gene:Zm00001d049625 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LSD1
Sequence

GGAGCTCCAGAAACCAAGACCCCGGCACCTCTCTCTCTCTCCATCCAGCTGCTTCTCCAA
TCTCCACCGTCCCTCTCTCTCGTTTGCTTGCTAGCTCTTGTTGCACACCACAGCCAGCTC
TAGCTTGCATTGGGGTTCTTGCCCTTGGCAAAGCCCTCATTTTTCTTGGTGTGCATATAG
CTTGCATGCATTTGATTGGGTTTAGGTTTGCCAGCAGCAGCAATTTAAACGAATAAACAG
GATCCCTTTCTTTCTCCAATTTTCGTGTGCGTATTAATTAGCTTGCATGCTTGGGCCGGC
GATGTCTGAGCTCGTGTGTGGCGGCTGCTTCACCATGCTGGTGCACTCCCGCAGCGCAAC
TAACGTACGGTGCCCTCACTGCGGCAGGCTCGGCTCGACAAGATCAGGAAACCAGATGGG
GCACCTGTCGTGCGGGCAATGCCGGACAACCCTGGCATACCCGCCGGGAGCGACGACAGT
CGGGTGCCCGACATGCCGCAACGTCAATCCAGTTCCAACCAGGGATGCTCGGCCGCAGCA
GACGATGGTTCTGGTGGAGAATCCTAAGACGCTGGATGAAAAGGGCAAACTGGTGAGCAG
TGTTGCCGTTGGTGTCACCTCGTGGAAAAGATGACCAACAACTCACTTCATTCCGGCTAA
TCTCGTCATCATCGACAACGACGACAGCTAATGTAAAATCAAGTGTGTTTTGAAGCGCTT
GATGTTTTTCATATAAGGAAAAAAAGAAAAGAGGCAGAGTAGCAGTAGCTGTTGAGCAGC
AAAAGATCTGAAAATTGTAAATACATTACATGCTATAGCCACCCGTGTGCGCCTTTGTGC
C