Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049615_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:37684173:37689709:1 gene:Zm00001d049615 gene_biotype:protein_coding transcript_biotype:protein_coding description:NHL domain-containing protein
Sequence	ATGGCGCAGGCCTCGTCCTTGGTGGCGGTGCTGCGCCGCCGCACCCCCGCCGCTGCCCGC CTGCTTCCTCACCGGCTCGTCTCCTCCGCTCCCGCTCCGGCGTTCGCCTCGTCCTCATTG GTCCCGCTCCCCTTGCCAAGCCTGATCGAGGGAGACAGATGCGGCGGCGGCCTCTCCGCT TCGTTCGGCTCCCACTCACGCCTCCGGCTTCCTCGGCGACACCATGCGGTTGCTATGGCT ACCAGGACAGCGCACCAAGTTGCTTCGAGCCCCGAGAGCCCAGCGGCGGTGACGTCGTTG TCGTCAAGTGAGGCTAGCACTAGCACTGCTGCTTCAGAGCACTCTGAGTTGGTCGATTTT ATCAAGTCAGCGTTTGGGAAGCTTGAAGGTCAAAATCATTGTTGGTTCAACATCATGAAT GACACTTGGATGAACTTGAACCATGAAGGAATATATCTTCTTCTTTTGTATCAATCTTGT GGAACATTGAACAACGACGGCAAACATCTAATTGCTTTTGAGAGCTTGAAACATCTGCAA CAGAGGTATCCACGCCTGAATGTTTTTGCTTTGCAACATGGGAGTGATGTTAGTTCTTTA GCTTCTCAAAGCCAAGCTTTCCGCACAATAGTGAAGGAGTACATCACATTTCCTATCTTG ATCTCAGACAAAAACTTCTCCAATATGACAAATGGTGCTTGCTACTTGCTATTTGAAGGT TCTAAGGACCCTGTACTATTCACAAACTGGGTTGAGGAGCCTGATGTCATGATTAAGGCC ATAGATGAACTTACCACGTCTAAAGAAAAACCTTCTGAAAATGTTCTGTCAAGAGTTTCT TGGCAGAAAGAAGAGGTTGTCAAAGAGCCATCTGTTGGTTCCTTCAGAAACTTGTTACTT TACCACCCAGCATGTGTATCAGTTGATGAAGATGGGGATCGCATTTTTATCTCTGACAGT AACCATCATAGGATCATCATTAGCAACAGCAATGGGATGATTTTAGATTATATTGGATCT TCCCCAGGCTATGAGGATGGAGAGTTTGAGTCAGCCAAATTCTTGCGCCCAGCTTCATCA TTTTATCACGCTGCTGAAGACTGTCTATTTATTGTAGATTCAGAGATGTTTCTTACATTT CATATTAGATTAATAAAAACTGGGAAGGTGTTTGGAAATATAGGAATCTTTGTCTGGAGT TATAAGAATCATGCAGTCAGAAAAGCAGATTTGGGAAGAAGGACTTTACAAACAGTTTAT CCAGTCTTCAATAAAAGCAATGGCATCTGGAGCTGGATTACCGATAAGCTTGGTATGAGA AAAGAAGCTACTCCAACTATTCAAGATTTTCATGCAGACTCCATGGCACTTCCATGGCAT TTGATACAAATTTCAGAGGACACCTTATTAGTCGCAGACCGCAGCTTTGAAACTCCGTGG ACCCTGACAATATCAACTGGCGAAAAGCAGGATATTGGAAGAGGCAGAGCTGAAATAATG GAGTCATATCAGAAAACTGTAAAAGAAAGGTGTGCTCTTATTAAGGATATGCACATGAAT TGGTCATCAAGTGCTAGAGTGCTTTCTGATTCAGTGCAGAAGATTCCCAACAATGAGCTT ATATCATCTATAGCAAGATTTCAGAATTACATTGTCTTCTGTGATACAGATGGTCAAAGG GTTCTGAAGCACGACTTGGATACCAAGACCACCTCAACCATTCAATTTTCTGACTGTGAG GTACTTGGGTTGCCATATTGGTCTGTTTGCAATCTCGAGAGAGTGTCAACCTGGGGGTAT TCATCTGGACAGTTACAGGAGCATGCGCAGCAAGTAGACGTGCTTCCTGGAAGATGCAAC ATCACCGTCTACGTGGACATTCCGGTTGGCACTGAACTTGCCGCGCCTTTGGTGGATAAT TGCATCTGGCGCCAAGTAAGGGGATCTGGCGCTGAGGTCTCTGGTTCTGATGGGCCAGAC ACGGCCACAGAGAAGGTCGGCATCGCGCAGCAGTGGTATGACGAGCTGGACAACCTGGCC TTCTCTGAGGTGGCGGAGGAGCCTACTGCCGCTGCGCATGGAGACGGCAACACTGACGAT CAAAGTTACCAGGAGCAGAGAAGAGTGCAATTCACCTGCACAGTGAACGTCAGCCCTGGG ACGTGTGAGCTGGTGGCCTCTGTCGCGCTGTATCTGAGGCTGGCTGGAAAGAGAACGACG ACCGACGGCGTGGAGCTCGTCAAGCGGGTGATGGGCGGGTGCCAGTTCCGCGAGGAGCAG GCCGGCGTGGAGCTGCTGGCGCGGTGCCGCGAGGACGACGACGCGACGGGCCTGGTGGTG GTGAAGCCGGTGCACCTGCGGCTGCGGCTGGTGTGCGGCGACCACCCGGCCGGCGCCACC AACAAGGAGACCATCAGCACCGAGTCCAGCCTCAAGATCAATGTCACCTTGGACTAG

Peptide Sequence

PEP ID	Zm00001d049615_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:37684173:37689709:1 gene:Zm00001d049615 transcript:Zm00001d049615_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:NHL domain-containing protein
Sequence	MAQASSLVAVLRRRTPAAARLLPHRLVSSAPAPAFASSSLVPLPLPSLIEGDRCGGGLSA SFGSHSRLRLPRRHHAVAMATRTAHQVASSPESPAAVTSLSSSEASTSTAASEHSELVDF IKSAFGKLEGQNHCWFNIMNDTWMNLNHEGIYLLLLYQSCGTLNNDGKHLIAFESLKHLQ QRYPRLNVFALQHGSDVSSLASQSQAFRTIVKEYITFPILISDKNFSNMTNGACYLLFEG SKDPVLFTNWVEEPDVMIKAIDELTTSKEKPSENVLSRVSWQKEEVVKEPSVGSFRNLLL YHPACVSVDEDGDRIFISDSNHHRIIISNSNGMILDYIGSSPGYEDGEFESAKFLRPASS FYHAAEDCLFIVDSEMFLTFHIRLIKTGKVFGNIGIFVWSYKNHAVRKADLGRRTLQTVY PVFNKSNGIWSWITDKLGMRKEATPTIQDFHADSMALPWHLIQISEDTLLVADRSFETPW TLTISTGEKQDIGRGRAEIMESYQKTVKERCALIKDMHMNWSSSARVLSDSVQKIPNNEL ISSIARFQNYIVFCDTDGQRVLKHDLDTKTTSTIQFSDCEVLGLPYWSVCNLERVSTWGY SSGQLQEHAQQVDVLPGRCNITVYVDIPVGTELAAPLVDNCIWRQVRGSGAEVSGSDGPD TATEKVGIAQQWYDELDNLAFSEVAEEPTAAAHGDGNTDDQSYQEQRRVQFTCTVNVSPG TCELVASVALYLRLAGKRTTTDGVELVKRVMGGCQFREEQAGVELLARCREDDDATGLVV VKPVHLRLRLVCGDHPAGATNKETISTESSLKINVTLD

Transcript Sequence

Transcript ID	Zm00001d049615_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:37684173:37689709:1 gene:Zm00001d049615 gene_biotype:protein_coding transcript_biotype:protein_coding description:NHL domain-containing protein
Sequence	CTCTCCCCGTTCCCCTGCCGGCCTGCCCCAGGCCCCCAGCTAAACCGCCGCCGAGACGCG GCATTCCCGTCCCTTTCCCGCCGCCACTACCTTCGCCTTCGCGCCACGGCCGATTCTCCC ATGGCGCAGGCCTCGTCCTTGGTGGCGGTGCTGCGCCGCCGCACCCCCGCCGCTGCCCGC CTGCTTCCTCACCGGCTCGTCTCCTCCGCTCCCGCTCCGGCGTTCGCCTCGTCCTCATTG GTCCCGCTCCCCTTGCCAAGCCTGATCGAGGGAGACAGATGCGGCGGCGGCCTCTCCGCT TCGTTCGGCTCCCACTCACGCCTCCGGCTTCCTCGGCGACACCATGCGGTTGCTATGGCT ACCAGGACAGCGCACCAAGTTGCTTCGAGCCCCGAGAGCCCAGCGGCGGTGACGTCGTTG TCGTCAAGTGAGGCTAGCACTAGCACTGCTGCTTCAGAGCACTCTGAGTTGGTCGATTTT ATCAAGTCAGCGTTTGGGAAGCTTGAAGGTCAAAATCATTGTTGGTTCAACATCATGAAT GACACTTGGATGAACTTGAACCATGAAGGAATATATCTTCTTCTTTTGTATCAATCTTGT GGAACATTGAACAACGACGGCAAACATCTAATTGCTTTTGAGAGCTTGAAACATCTGCAA CAGAGGTATCCACGCCTGAATGTTTTTGCTTTGCAACATGGGAGTGATGTTAGTTCTTTA GCTTCTCAAAGCCAAGCTTTCCGCACAATAGTGAAGGAGTACATCACATTTCCTATCTTG ATCTCAGACAAAAACTTCTCCAATATGACAAATGGTGCTTGCTACTTGCTATTTGAAGGT TCTAAGGACCCTGTACTATTCACAAACTGGGTTGAGGAGCCTGATGTCATGATTAAGGCC ATAGATGAACTTACCACGTCTAAAGAAAAACCTTCTGAAAATGTTCTGTCAAGAGTTTCT TGGCAGAAAGAAGAGGTTGTCAAAGAGCCATCTGTTGGTTCCTTCAGAAACTTGTTACTT TACCACCCAGCATGTGTATCAGTTGATGAAGATGGGGATCGCATTTTTATCTCTGACAGT AACCATCATAGGATCATCATTAGCAACAGCAATGGGATGATTTTAGATTATATTGGATCT TCCCCAGGCTATGAGGATGGAGAGTTTGAGTCAGCCAAATTCTTGCGCCCAGCTTCATCA TTTTATCACGCTGCTGAAGACTGTCTATTTATTGTAGATTCAGAGATGTTTCTTACATTT CATATTAGATTAATAAAAACTGGGAAGGTGTTTGGAAATATAGGAATCTTTGTCTGGAGT TATAAGAATCATGCAGTCAGAAAAGCAGATTTGGGAAGAAGGACTTTACAAACAGTTTAT CCAGTCTTCAATAAAAGCAATGGCATCTGGAGCTGGATTACCGATAAGCTTGGTATGAGA AAAGAAGCTACTCCAACTATTCAAGATTTTCATGCAGACTCCATGGCACTTCCATGGCAT TTGATACAAATTTCAGAGGACACCTTATTAGTCGCAGACCGCAGCTTTGAAACTCCGTGG ACCCTGACAATATCAACTGGCGAAAAGCAGGATATTGGAAGAGGCAGAGCTGAAATAATG GAGTCATATCAGAAAACTGTAAAAGAAAGGTGTGCTCTTATTAAGGATATGCACATGAAT TGGTCATCAAGTGCTAGAGTGCTTTCTGATTCAGTGCAGAAGATTCCCAACAATGAGCTT ATATCATCTATAGCAAGATTTCAGAATTACATTGTCTTCTGTGATACAGATGGTCAAAGG GTTCTGAAGCACGACTTGGATACCAAGACCACCTCAACCATTCAATTTTCTGACTGTGAG GTACTTGGGTTGCCATATTGGTCTGTTTGCAATCTCGAGAGAGTGTCAACCTGGGGGTAT TCATCTGGACAGTTACAGGAGCATGCGCAGCAAGTAGACGTGCTTCCTGGAAGATGCAAC ATCACCGTCTACGTGGACATTCCGGTTGGCACTGAACTTGCCGCGCCTTTGGTGGATAAT TGCATCTGGCGCCAAGTAAGGGGATCTGGCGCTGAGGTCTCTGGTTCTGATGGGCCAGAC ACGGCCACAGAGAAGGTCGGCATCGCGCAGCAGTGGTATGACGAGCTGGACAACCTGGCC TTCTCTGAGGTGGCGGAGGAGCCTACTGCCGCTGCGCATGGAGACGGCAACACTGACGAT CAAAGTTACCAGGAGCAGAGAAGAGTGCAATTCACCTGCACAGTGAACGTCAGCCCTGGG ACGTGTGAGCTGGTGGCCTCTGTCGCGCTGTATCTGAGGCTGGCTGGAAAGAGAACGACG ACCGACGGCGTGGAGCTCGTCAAGCGGGTGATGGGCGGGTGCCAGTTCCGCGAGGAGCAG GCCGGCGTGGAGCTGCTGGCGCGGTGCCGCGAGGACGACGACGCGACGGGCCTGGTGGTG GTGAAGCCGGTGCACCTGCGGCTGCGGCTGGTGTGCGGCGACCACCCGGCCGGCGCCACC AACAAGGAGACCATCAGCACCGAGTCCAGCCTCAAGATCAATGTCACCTTGGACTAGCTA GTGGTTCTGAATTCTGATTTTGGATTTTGATCCGTGTCTATTTTTATTCTTTGGAACCTG TCTATTTTTATTCTTTGGATTTTGATCCGGGCTGGCGATGGGAACGTGTCAGTACGTGTA TGCGACTATGCGATGGTAAGGAACAAGCTGACTGACACCATCTCATGTACTGGAGCAATA TAGTTGACCTAGTTGTGCCGAGAACTT