Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049579_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:4:35943977:35947765:1 gene:Zm00001d049579 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tyrosine--tRNA ligase 1 cytoplasmic
Sequence	ATGGACTCCACGCCGGCACCCGAGGCAGCCCCCGGCGCGTCCTCTTCCTCTCCCGCCGCT GCCGCGGCCGCCGAGGGTCTTGCGGGGGGCGTGGCGGCGATGACCCTGGATGAGCGGTTC GAAATGCTGCGGGGCATCGGGGAGGAGTGCATCCAGGAGGACGAGCTCAGGCGACTGCTT GAGAACAAGCCCGTACCCATCTGCTACGACGGCTTCGAGCCCTCTGGACGCATGCACATC GCTCAGGGCGTTGTGAAGACCATCAACGTGAACAAGATGGTCAACGCCGGGTGCAAGGTG AAAATTTGGATCGCCGACTGGTTCGCGCAGCTCAACAACAAGATGGGAGGCGACCTGAAG AAGATCCAGACGGTAGGGCGCTACATGATCGAGATTTGGAAAGCGGCTGGGATGAACCTT GACGGGGTGGAGTTCCTGTGGTCCTCCGAGGAGATCAACAAGCGCGCACACGAGTACTGG CCAATTGTGATGGACATTGCCCGGAAAAACAACGTCAAAAGGATAATGAGATGCTGCCAG ATTATGGGCAGAAGTGATCAGGACGACTTGACTGCTGCCCAGATTTTTTACCCTTGCATG CAATGTGCTGATATATTTTTCTTAAAGGCTGACATATGCCAGTTGGGGATGGACCAAAGG AAGGTCAACGTGCTAGCTAGGGAGTACTGCGATGACATCAAACGGAAGAACAAACCAATT ATTCTTTCGCATCATATGCTCCCTGGTTTTAAAGAAGGCCAGGAGAAAATGTCAAAGAGT GATCCATCCTCAGCTATCTTTATGGAAGATGATGAGGCCCAAGTTAATGTGAAGATAAAG CAAGCCTTTTGCCCTCCCAAAATTGTTGAGGGGAATCCTTGTTTGGAGTATATTAAATAC ATTGTTTTCCCTTGGTTTGGAAGATTTGAGGTCATCCGTAAGGAAAGCAATGGTGGTAAC AAGACATTTACATGCATGAATGAACTAATTTCTGATTACGAGACTGGTGCTTTGCATCCT GCCGATGTCAAACCTGCACTGGCAAAAGCAATAAATGAAATTTTGCAGCCTGTTCGTGAT CATTTCAACAACAACAACGAAGCCAAAGTTCTTCTTAACACTGTCAAGAAGTACAGAGTA ACCAATTGA

Peptide Sequence

PEP ID	Zm00001d049579_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:4:35943977:35947765:1 gene:Zm00001d049579 transcript:Zm00001d049579_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tyrosine--tRNA ligase 1 cytoplasmic
Sequence	MDSTPAPEAAPGASSSSPAAAAAAEGLAGGVAAMTLDERFEMLRGIGEECIQEDELRRLL ENKPVPICYDGFEPSGRMHIAQGVVKTINVNKMVNAGCKVKIWIADWFAQLNNKMGGDLK KIQTVGRYMIEIWKAAGMNLDGVEFLWSSEEINKRAHEYWPIVMDIARKNNVKRIMRCCQ IMGRSDQDDLTAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPI ILSHHMLPGFKEGQEKMSKSDPSSAIFMEDDEAQVNVKIKQAFCPPKIVEGNPCLEYIKY IVFPWFGRFEVIRKESNGGNKTFTCMNELISDYETGALHPADVKPALAKAINEILQPVRD HFNNNNEAKVLLNTVKKYRVTN

Transcript Sequence

Transcript ID	Zm00001d049579_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:35943977:35947765:1 gene:Zm00001d049579 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tyrosine--tRNA ligase 1 cytoplasmic
Sequence	ACTCCAAAGCCGCCATCTTCTCACGCACACGGCACACCGCGCATCCCCTGCTCTCGGCAG TCTCCGCGGGCTCCCTCCTCCGCCGCCGCTTCCATGGACTCCACGCCGGCACCCGAGGCA GCCCCCGGCGCGTCCTCTTCCTCTCCCGCCGCTGCCGCGGCCGCCGAGGGTCTTGCGGGG GGCGTGGCGGCGATGACCCTGGATGAGCGGTTCGAAATGCTGCGGGGCATCGGGGAGGAG TGCATCCAGGAGGACGAGCTCAGGCGACTGCTTGAGAACAAGCCCGTACCCATCTGCTAC GACGGCTTCGAGCCCTCTGGACGCATGCACATCGCTCAGGGCGTTGTGAAGACCATCAAC GTGAACAAGATGGTCAACGCCGGGTGCAAGGTGAAAATTTGGATCGCCGACTGGTTCGCG CAGCTCAACAACAAGATGGGAGGCGACCTGAAGAAGATCCAGACGGTAGGGCGCTACATG ATCGAGATTTGGAAAGCGGCTGGGATGAACCTTGACGGGGTGGAGTTCCTGTGGTCCTCC GAGGAGATCAACAAGCGCGCACACGAGTACTGGCCAATTGTGATGGACATTGCCCGGAAA AACAACGTCAAAAGGATAATGAGATGCTGCCAGATTATGGGCAGAAGTGATCAGGACGAC TTGACTGCTGCCCAGATTTTTTACCCTTGCATGCAATGTGCTGATATATTTTTCTTAAAG GCTGACATATGCCAGTTGGGGATGGACCAAAGGAAGGTCAACGTGCTAGCTAGGGAGTAC TGCGATGACATCAAACGGAAGAACAAACCAATTATTCTTTCGCATCATATGCTCCCTGGT TTTAAAGAAGGCCAGGAGAAAATGTCAAAGAGTGATCCATCCTCAGCTATCTTTATGGAA GATGATGAGGCCCAAGTTAATGTGAAGATAAAGCAAGCCTTTTGCCCTCCCAAAATTGTT GAGGGGAATCCTTGTTTGGAGTATATTAAATACATTGTTTTCCCTTGGTTTGGAAGATTT GAGGTCATCCGTAAGGAAAGCAATGGTGGTAACAAGACATTTACATGCATGAATGAACTA ATTTCTGATTACGAGACTGGTGCTTTGCATCCTGCCGATGTCAAACCTGCACTGGCAAAA GCAATAAATGAAATTTTGCAGCCTGTTCGTGATCATTTCAACAACAACAACGAAGCCAAA GTTCTTCTTAACACTGTCAAGAAGTACAGAGTAACCAATTGAGGAGTGGAAGCTGTCCAT CTTTAGGGCATGTTTACATTAGGGTGGATATCGCCGTTTGAAATTCTTGTATGCTATTCT GTTACTAGTTGCATAGGTAGCTCAAAAGTTTCATGTTTCTAGATATATAAAAAGAATACT TTACTTGTTGACTACTTGATGTGCATCATAGGGCTCAACCTAAACAGTGTTGCACTGTAA GTATTCGATAAAAGATAAACAAAGCCAATATCCAGGAGAGACATGAGATGGCATGT