Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049548_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:4:34363899:34372117:1 gene:Zm00001d049548 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein PAF1 homolog
Sequence	ATGGCGTCGTATAGGCCGTACGCGCCGCCACCACCGCAGGGCGGCTATCCGCCGCAGATG AATTCGTACGCGCCGCCGCCGCAGCAGGCGCCGTACAGCAGGATGCCGGCGCCGACATAC CACGCGGGGCCTCCGCCACCACCGCCACCGGGGCCGCCGCCACCTCACCAACCGCAGTTC AATTTCGGTCCCGGGCCTCCGCAGCAGCTCCCGCCCCCGCCCCCACCGCAGATGTACTAC CAGCCGCCGCCACCGCCCTACGGCGGGAACAGTAATCCGCCTCCTCCACCTTCGGCGCCA CCCCCGCCTCCGTCCCCACCCCCTGCGGCATCGCCCCCGCCCCCTCCGCCTCCGGCACAG CCACCGTCTGCCCATGCCCTGCTGCCCCCAAAGGGGCCACAGCCTAAGGCAACGCTGCTG AGAGCGGAGACGGAAGAGGAGCGTCGTGCGCGGAAGAAGCGCGAGTTTGAGAAGCAGCGG GTGGACGACCGCAAGCAGCACCAGATGATGCGCCAGACACAAGCCACCATTCTGCAGAAG ACACAGCAGGTTCGCACTGCTCAGCAGCAGCCGCAGAGCCGCCACCACCACCACCACCCT CCGGGTGGCTCTCGGGCAGGGGCAACTGGGTCTCGCCCAGCAACAGCGGTTAATGCTGAG AGGTTTGAGAACCGGCTAAAAAAACCAACAACGTTCCTCTGCAAGCACAAATTTAGGAAT GAACTCCCGGATCCAAGTGCTCAGCTGAAATGGCTGCCCCTGAATAAGGATAAGGACCGA TATACCAAATACAGGATAACTTCATTGGAGAAAAACTATATTCCTAAAATGATTGTCCCT GAGGATATTGGGATACCTCTTGACCTACTTGACATGAGTGTATACAACCCCCCGGATGTT CAGCCGCCCATGGCTCCTGAAGATGAAGAACTATTGCGTGATGATCAGGTCCTCACCCCT ATTAAACAAGAAGGTACAAGGAAAAGGGAGAGGCCCACTGACAAAGGTGTTTCTTGGTTG GTCAAAACACAATACATATCTCCACTAAGTGCTGATGCAGCCAAAACGTCCCTTACTGAG AAGCAAGCAAAGGAAAGGCGGGAATCAAGGGGGGGTCGCAATGCTTTCCTAGACAATCTT AATGATAGAGAGAAACAGATCAAAGCCATTGAAGAATCCTTTAGAGCAGCCAAGTCAAGG CCTGTTCACCAGACTAAACGTGGGATGCAAGCTGAGTGGGTTATGCCTTTGCTACCTGAT TTTGATAGGTACGAGGAGCCGTTTGTTATGGTGAATTTTGATGGCGATCCAACTGCTGAT TCTGAGCAGTACAACAAACTTGAGAGACCCGTACGTGATGAATGTGAATCTCGGGCCGTG ATGAAAAGTTTTAGTGTAAGTGGTTCAGACCCTTCAAAACAAGAGAAGTTTTTGGCATAC ATGGCCCCAGCACCCCATGAGCTTACCAGAGACTTGGATGATGAAAACGATGACATCCAG TATTCCTGGCTAAGAGAATATCACTGGGAAGTAAGAGGAGATGATAAAGACGATCCTACA ACATACCTTGTCACATTTGATAAGAAGGATGGTGCAAAATATTTGCCTCTTCCTACCAAG CTAGTTTTGCAGAAGAAAAAGGCAAAGGAGGGGAGGTCTGGAGATGAAATCGAACATTTT CCAGTACCTTCCCGTATCACTGTGAGTAAAACAGCTCATGGTGGTACCATGGAGCGCGGA GAATCTTCTGGCATGCATGCGAATTCAAAGCCACGAAGATCTCATGTTGATGATGATCTT GATGAGCATCCAAAGCGTACTCGGGTAGAAGATATTGACCAATATAGTGAAGAATATTCT GAGTGA

Peptide Sequence

PEP ID	Zm00001d049548_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:4:34363899:34372117:1 gene:Zm00001d049548 transcript:Zm00001d049548_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein PAF1 homolog
Sequence	MASYRPYAPPPPQGGYPPQMNSYAPPPQQAPYSRMPAPTYHAGPPPPPPPGPPPPHQPQF NFGPGPPQQLPPPPPPQMYYQPPPPPYGGNSNPPPPPSAPPPPPSPPPAASPPPPPPPAQ PPSAHALLPPKGPQPKATLLRAETEEERRARKKREFEKQRVDDRKQHQMMRQTQATILQK TQQVRTAQQQPQSRHHHHHPPGGSRAGATGSRPATAVNAERFENRLKKPTTFLCKHKFRN ELPDPSAQLKWLPLNKDKDRYTKYRITSLEKNYIPKMIVPEDIGIPLDLLDMSVYNPPDV QPPMAPEDEELLRDDQVLTPIKQEGTRKRERPTDKGVSWLVKTQYISPLSADAAKTSLTE KQAKERRESRGGRNAFLDNLNDREKQIKAIEESFRAAKSRPVHQTKRGMQAEWVMPLLPD FDRYEEPFVMVNFDGDPTADSEQYNKLERPVRDECESRAVMKSFSVSGSDPSKQEKFLAY MAPAPHELTRDLDDENDDIQYSWLREYHWEVRGDDKDDPTTYLVTFDKKDGAKYLPLPTK LVLQKKKAKEGRSGDEIEHFPVPSRITVSKTAHGGTMERGESSGMHANSKPRRSHVDDDL DEHPKRTRVEDIDQYSEEYSE

Transcript Sequence

Transcript ID	Zm00001d049548_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:34363899:34372117:1 gene:Zm00001d049548 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein PAF1 homolog
Sequence	GACGAGACGCCGACGAGAGATCCGACTACCTCGCGCTCCGACACGCCAACGCGTAGATCT GGTAGAATAGGTGGCGGTGGGCTCGGACGTGCAGTGGTAGTCTCTTCTGCAGTGGCAGCG GCGGAGGAGACGGGGGAGCGAGCAGTCGCCGCGGCGTGGGTCTGTTGTGTGCTGGGACTC GGGTTCCGTGAAACCCTAGACGCCGCGGGATGGCGTCGTATAGGCCGTACGCGCCGCCAC CACCGCAGGGCGGCTATCCGCCGCAGATGAATTCGTACGCGCCGCCGCCGCAGCAGGCGC CGTACAGCAGGATGCCGGCGCCGACATACCACGCGGGGCCTCCGCCACCACCGCCACCGG GGCCGCCGCCACCTCACCAACCGCAGTTCAATTTCGGTCCCGGGCCTCCGCAGCAGCTCC CGCCCCCGCCCCCACCGCAGATGTACTACCAGCCGCCGCCACCGCCCTACGGCGGGAACA GTAATCCGCCTCCTCCACCTTCGGCGCCACCCCCGCCTCCGTCCCCACCCCCTGCGGCAT CGCCCCCGCCCCCTCCGCCTCCGGCACAGCCACCGTCTGCCCATGCCCTGCTGCCCCCAA AGGGGCCACAGCCTAAGGCAACGCTGCTGAGAGCGGAGACGGAAGAGGAGCGTCGTGCGC GGAAGAAGCGCGAGTTTGAGAAGCAGCGGGTGGACGACCGCAAGCAGCACCAGATGATGC GCCAGACACAAGCCACCATTCTGCAGAAGACACAGCAGGTTCGCACTGCTCAGCAGCAGC CGCAGAGCCGCCACCACCACCACCACCCTCCGGGTGGCTCTCGGGCAGGGGCAACTGGGT CTCGCCCAGCAACAGCGGTTAATGCTGAGAGGTTTGAGAACCGGCTAAAAAAACCAACAA CGTTCCTCTGCAAGCACAAATTTAGGAATGAACTCCCGGATCCAAGTGCTCAGCTGAAAT GGCTGCCCCTGAATAAGGATAAGGACCGATATACCAAATACAGGATAACTTCATTGGAGA AAAACTATATTCCTAAAATGATTGTCCCTGAGGATATTGGGATACCTCTTGACCTACTTG ACATGAGTGTATACAACCCCCCGGATGTTCAGCCGCCCATGGCTCCTGAAGATGAAGAAC TATTGCGTGATGATCAGGTCCTCACCCCTATTAAACAAGAAGGTACAAGGAAAAGGGAGA GGCCCACTGACAAAGGTGTTTCTTGGTTGGTCAAAACACAATACATATCTCCACTAAGTG CTGATGCAGCCAAAACGTCCCTTACTGAGAAGCAAGCAAAGGAAAGGCGGGAATCAAGGG GGGGTCGCAATGCTTTCCTAGACAATCTTAATGATAGAGAGAAACAGATCAAAGCCATTG AAGAATCCTTTAGAGCAGCCAAGTCAAGGCCTGTTCACCAGACTAAACGTGGGATGCAAG CTGAGTGGGTTATGCCTTTGCTACCTGATTTTGATAGGTACGAGGAGCCGTTTGTTATGG TGAATTTTGATGGCGATCCAACTGCTGATTCTGAGCAGTACAACAAACTTGAGAGACCCG TACGTGATGAATGTGAATCTCGGGCCGTGATGAAAAGTTTTAGTGTAAGTGGTTCAGACC CTTCAAAACAAGAGAAGTTTTTGGCATACATGGCCCCAGCACCCCATGAGCTTACCAGAG ACTTGGATGATGAAAACGATGACATCCAGTATTCCTGGCTAAGAGAATATCACTGGGAAG TAAGAGGAGATGATAAAGACGATCCTACAACATACCTTGTCACATTTGATAAGAAGGATG GTGCAAAATATTTGCCTCTTCCTACCAAGCTAGTTTTGCAGAAGAAAAAGGCAAAGGAGG GGAGGTCTGGAGATGAAATCGAACATTTTCCAGTACCTTCCCGTATCACTGTGAGTAAAA CAGCTCATGGTGGTACCATGGAGCGCGGAGAATCTTCTGGCATGCATGCGAATTCAAAGC CACGAAGATCTCATGTTGATGATGATCTTGATGAGCATCCAAAGCGTACTCGGGTAGAAG ATATTGACCAATATAGTGAAGAATATTCTGAGTGATGAACTGATAAATCATAATTATCTT GCACCAACGAATTTGATCAGTACATGTGAAGCCGTCAAGGCATAAGTGGTTTTATGGTGC ATGGTGATGCAGTGAAAGAGAATACCTGGCAGTGGGAGGACATCATGGCTTGGCCAGTTT CTTAAGGGCAGAGTATGTGAAGCAAAGCTGAGTGTAACCAGACTTCAAGACTTTGATCTC TGTAGTGATCATAGAAAGTATCACATTGTTGTAAAGAAGTTTTGCCTTTAAAGTCTTGGA GCGGTTCTCAACTGTTTGTTTTGATAATATATAGACCCCCCATTTTGCAAATTTCTTCCC GCTTTTCTTTCCCAATCGACTGTGCAAGTACAGAAATTTGTTTACATTATTAGGATGGGC AGGTCATATTATGCTAGACACATCTTTTTTGGCAGCCCTGAGGGCCTGCTAATCGAAGGT CATATGTTTATGCACTTGAACATCCAGTGAAAATTAGGGTAGCATGACGAGGAGTAAATT GCAGCTGGTGGACACGTTCCAGGATAGTCAATGGTTGCCTGATAGCCTCTGGAATTATAT TCATTTTCAACATTAATTGTTTTATTATTAACATTACTTTTTGTCTAAAATATTGCAGAA GTATATGAGATGATAGGAGGGTAACCATGAAACAGTTTGTGGTCCCTACGTTTCAATTTT ATTCCAGCACAAAGTGGCAATGATATGATGGCTGCATTGGTCTGGTATTATTAATTCATG ACAATATTTTAGTAGCAGTAATAACAGCAAAATTTCTTCAGGCTTAGGCTGACATGCAGG AGATGATATTTTGTTTCCATTGCTGTGTGCTGTATTTGCCTTAGCTTTGGCACTTAAATA TTGCATAGTTACTGTTGTCATCTTAAGTAGTCTGGAGGACCATTTCTTTGCTGGCACCCA GGTATTCTTTTATCCATAATCCATTTCCTAATGTTTCGTCTAGTAGTTTTTATGTTTGAT AATTTTCATCTGATGTTAGGTTTGGTCGAGTTTTATGGATGCTAAGATATGGTTCCTCTC GAATGACAGCATAATTGTGGTATGTCTGACATCTTGTACACAAATGCCATCAAGAATCAT TTGGGACTTGACATCTTGTACACTAATGCCATCAGCAATCATTTGGGGCTTCATGTCTGA TGTGTGTTGTTTACATCATAACTCCTGGACTGTTGCATGGAATAATATTGTAGCTGTAGC TGCTGTAAGTCACAAATTTCTTGTTTTGTTTTACATAGGTTGTCCATATGCTCTTTAAGA GACTTACCAGTTGTTCAGTACAGGATTCTTGCAATCTCTGTATTATGCAGTTTTTTTTAT ACATGTTGCATCCTGTGTAGTTCTTGAATTTCTTATTGTTTATAGAATATCAAATTTTAG ATTTCTAAAGTACTGTTTGCTTTATTTATACTTGGATTTTTTGTAGTCATCCGATTCTTT GGTAAACATTTATGTTTAGTGCAGTGGTGAGAGTTCTCACTAATTCACCAAGTCACAGGT TCAAAGCAGCCTGCTTGCATTTGCATGGGGAAGGCTTGCCTCAGTTTATCCCTTTCCTAG GCCTCACTCATGTGGGAGCCTCTAACACTGGGTCTGCTCCCATGTTCTTTTGATTATTGC TTAAACAGGTCCTTTAGTAACTTTAATTTGTCTGCTGATGGTTACACATAGCCAAAGTTG GCAGGCTGCCAACAAATTACTGCAATTGTTGTTCTTTTTAGTCCTGGCTGATCTATATTG CATATACTTCTATTTCCATTTTGGATTTAATATCTGAAATGTAGGATTTTTTTTGTTGCA ACTGCATCGCTAGTGCTTGTTGACCTTTCTGTTGTTTGATGGAGGTATCTGTGACAGGAC CCCTGTGAAGGAATATGTACATATGTTTCATGATGTCGAACATTGGAAAGATGCAGCTAC TAATTTGTTTGTGATGTTTTTAAATTGTATATCTGGGTTCCCCAAGTTGCGTGTACAAAC AATGAGAGTGCACCTTTTAAAGAAGGCATCATGATTTTCTGTCTAGATCTCTATTAAGTA GAGTTGTCTT