Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049522_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:4:33127103:33135453:-1 gene:Zm00001d049522 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 45 homolog
Sequence	ATGGTGCTGATCACTCTCGTCCGCGACTACATCGACCGCATGCTCCACGACATCCCGGGC ATGAAGGTCCTCGTCCTCGACCCCCAAACCGTTGGGATGGTGAGCGTGGTGTACAGCCAG TCGGATCTGCTGCGGAAGGAGGTCTTCCTCGTCGAGACCATGGACAACGCCTCCAGCTCC AGGGAGTCCATGGCGCACCTCAAGGCCGTCTACTTCCTCCGACCCTCCGCTAACAACGTC CAGAAGCTCCGCAGGCAACTCGCCATGCCGCGCTTCGCCGAGTACCACCTATTCTTCTCC AGTATATTGAAGGTCCCGCAGATTCAAATACTTGCTGACTCGGATGAACAGGAGGTTGTG CAGCAAGTTCAGGAGTTCTATGCTGATTTTTGTGCCATTGACCCATACCATTTCACTCTC AACATACAAAATAACCACATGTATATGCTCCCAACAGTGGTCGACCCTCCTGGTATGCAA GGCTTCTGTGATCGAGCCGTCGACGGCATTGCTTCTGTCTTCTTGGCTTTGAAGCGCCGC CCTGTTATTAGATATCAGAGGACATCAGATGTTGCAAAAAGGATTGCACAAGAAACTGCG AGATTGATGTATGAGCAGGAAAGTGGCCTGTTTGATTTTAGACGAACAGAAAACTCTTCT TTGTTGTTGGTGATCGACAGAAGGGATGATCCTGTTACGCCTTTACTTAACCAGTGGACA TACCAGGCTATGGTTCATGAGCTTATTGGAATCGAGAACAACAAGGTGGACCTTATGGGA TTTGCTAATATTCCTAAAGACCAGCAGGAGGTTGTTCTATCATCGGTTCAAGACGATTTT TTTAGAGCTAACATGTTTGAGAACTTTGGGGACCTTGGTATGAACCTCAAAAGAATGGTA GATGATTTTCAACATCTTTCCAAGAGCAGCCTTAATCTCCAGAGCATAGGTGACATGGCA AAGTTTGTGAGCAACTATCCTGAATATCGAAAGACACATGGAAATGTAACGAAACATGTA AATTTGGTGAGCGAGCTGAGCAGAATTGTGGAGGAAAGGAAACTTATGCTAGTTTCACAG ACAGAACAAGAGCTAGCATGTACTAGTGGACAAGCAGCAGCCTTTGAGGCTGTCACTTCC TTGCTAAACAATGAAAGCGTATCTGATATTGACCGCTTACGATTAGTAATGCTCTATGCT TTGCGGTATGAAAAAGAGAGTCCAGTTCAATTGATGCAACTTTTCAACAAATTAGCTTCT CATTCTGCGAAATACAAGTCAGGGCTTGTTCAATTCCTCCTTAAGCAAGCTGGCATTGAT AAGAGAACAGGCGACTTGTATGGGAACCGTGATCTGTTAAATATTGCTCGCAATATGGCT CGTGGGCTTAAGGTTTGCATAGAAGTTCTACGAATGGATGTTACATAA

Peptide Sequence

PEP ID	Zm00001d049522_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:4:33127103:33135453:-1 gene:Zm00001d049522 transcript:Zm00001d049522_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 45 homolog
Sequence	MVLITLVRDYIDRMLHDIPGMKVLVLDPQTVGMVSVVYSQSDLLRKEVFLVETMDNASSS RESMAHLKAVYFLRPSANNVQKLRRQLAMPRFAEYHLFFSSILKVPQIQILADSDEQEVV QQVQEFYADFCAIDPYHFTLNIQNNHMYMLPTVVDPPGMQGFCDRAVDGIASVFLALKRR PVIRYQRTSDVAKRIAQETARLMYEQESGLFDFRRTENSSLLLVIDRRDDPVTPLLNQWT YQAMVHELIGIENNKVDLMGFANIPKDQQEVVLSSVQDDFFRANMFENFGDLGMNLKRMV DDFQHLSKSSLNLQSIGDMAKFVSNYPEYRKTHGNVTKHVNLVSELSRIVEERKLMLVSQ TEQELACTSGQAAAFEAVTSLLNNESVSDIDRLRLVMLYALRYEKESPVQLMQLFNKLAS HSAKYKSGLVQFLLKQAGIDKRTGDLYGNRDLLNIARNMARGLKVCIEVLRMDVT

Transcript Sequence

Transcript ID	Zm00001d049522_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:33127103:33135453:-1 gene:Zm00001d049522 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 45 homolog
Sequence	ACTACAACATCTGTCACCGTGAAATCTCGGCTACCTCCTTCTGACTTCTGGTACCTCGCC GCCGGGGACCCAACTCCGATCCCCACCCCACCATACCAAAGCCACCGCGGCTGCGGCTGC GGCTTCCGCATCATCAATGGTGCTGATCACTCTCGTCCGCGACTACATCGACCGCATGCT CCACGACATCCCGGGCATGAAGGTCCTCGTCCTCGACCCCCAAACCGTTGGGATGGTGAG CGTGGTGTACAGCCAGTCGGATCTGCTGCGGAAGGAGGTCTTCCTCGTCGAGACCATGGA CAACGCCTCCAGCTCCAGGGAGTCCATGGCGCACCTCAAGGCCGTCTACTTCCTCCGACC CTCCGCTAACAACGTCCAGAAGCTCCGCAGGCAACTCGCCATGCCGCGCTTCGCCGAGTA CCACCTATTCTTCTCCAGTATATTGAAGGTCCCGCAGATTCAAATACTTGCTGACTCGGA TGAACAGGAGGTTGTGCAGCAAGTTCAGGAGTTCTATGCTGATTTTTGTGCCATTGACCC ATACCATTTCACTCTCAACATACAAAATAACCACATGTATATGCTCCCAACAGTGGTCGA CCCTCCTGGTATGCAAGGCTTCTGTGATCGAGCCGTCGACGGCATTGCTTCTGTCTTCTT GGCTTTGAAGCGCCGCCCTGTTATTAGATATCAGAGGACATCAGATGTTGCAAAAAGGAT TGCACAAGAAACTGCGAGATTGATGTATGAGCAGGAAAGTGGCCTGTTTGATTTTAGACG AACAGAAAACTCTTCTTTGTTGTTGGTGATCGACAGAAGGGATGATCCTGTTACGCCTTT ACTTAACCAGTGGACATACCAGGCTATGGTTCATGAGCTTATTGGAATCGAGAACAACAA GGTGGACCTTATGGGATTTGCTAATATTCCTAAAGACCAGCAGGAGGTTGTTCTATCATC GGTTCAAGACGATTTTTTTAGAGCTAACATGTTTGAGAACTTTGGGGACCTTGGTATGAA CCTCAAAAGAATGGTAGATGATTTTCAACATCTTTCCAAGAGCAGCCTTAATCTCCAGAG CATAGGTGACATGGCAAAGTTTGTGAGCAACTATCCTGAATATCGAAAGACACATGGAAA TGTAACGAAACATGTAAATTTGGTGAGCGAGCTGAGCAGAATTGTGGAGGAAAGGAAACT TATGCTAGTTTCACAGACAGAACAAGAGCTAGCATGTACTAGTGGACAAGCAGCAGCCTT TGAGGCTGTCACTTCCTTGCTAAACAATGAAAGCGTATCTGATATTGACCGCTTACGATT AGTAATGCTCTATGCTTTGCGGTATGAAAAAGAGAGTCCAGTTCAATTGATGCAACTTTT CAACAAATTAGCTTCTCATTCTGCGAAATACAAGTCAGGGCTTGTTCAATTCCTCCTTAA GCAAGCTGGCATTGATAAGAGAACAGGCGACTTGTATGGGAACCGTGATCTGTTAAATAT TGCTCGCAATATGGCTCGTGGGCTTAAGGTTTGCATAGAAGTTCTACGAATGGATGTTAC ATAAAATTCTGCTGCTTCTGATGCACTTATTGGTTGCAGGGAGTTGAGAATGTCTACACC CAACACCAGCCTCTTTTGTTCCAAACGATGGAAGGAATTGTTAAAGGGAGATTGCGAGAT GCTGACTATCCACTTGTTGGCAATCATTTCCAGCAGGGCAGGCCTCAAGATGTTGTCATA TTCATTGTTGGAGGGACAACTTACGAGGAAGCAAGGTCGGTAGCCCTTTATAATGCGGCA AATCCTGGAGTCCGTTTTTTCCTTGGAGGTTCCGTGGTTCTAAGTTCAAAGAGATTTCTT GAAGATTTGGGAGAGGCACAAAGGATATCAAAATCAAGCACTATAATATGAGCTGAATGG TTTTATCTCCCATTTGAAGAGTATCATAGTATGATTTGACAGTGTTGACTCAATTTTGCA TAGAATAAAATTTGTGATAAATCTGTAACATAGTTCTAGGTGCATAGGATCAAATTTCTT GAAGATATGTAGCTGCTCCAGCTTCTAACACCTTCTCTTGGTGTATTGTCTGCAAAAGCA AGAGAATATCAGTGTACAAATTGATTGTTAGCGCTTGTGAAG