Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049495_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:4:32390404:32404654:1 gene:Zm00001d049495 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 83 description:Putative MYB DNA-binding domain superfamily protein

Sequence

ATGGAGCAAGCTGATGTGTCAGCCAAGATGGCTGAAGACTCCTGCTTGGAGCATGCAGAG
GCTGTTACGAGCAAAAGCTCTGCGAAGAAACACAGGAAGAAAAAGAGGAAAGATAAAGAG
GTTGAAACTATTGGCCAGAAGCAGATACTCGATGCTGATGAAAATGTTGGGTCAGAAGAT
ACGAAGAGGAACAGCAGAGAAAGGGAACATGATAGGAAGTCAAAGAAGCACAAACGAAAG
CATCAGGATGACGAGACTGCCTCAAATGGTTCTTCTGGTAATCAAATTGTTTTAGGGGAA
GATAAGAGGACGGAAAAAGAGTATTTAGTTACCTTGGATTTGGAAGAGGACAATAAATCT
GATATGTCAAAGATTGGGAAGAAGACAGATAGCAAGAAGAAGAGGAGAAAAGAGAGAAAT
GATGGTGTTGACCTAAGACAAAATACACTAGTTGGAGAGGGCAAGAATGGTAAGAATAAC
AAAGAGAAAAAAATGTGTGAGGATGAGAATGGTGGCGGTGAAAGAGAGAAAGAAAACATG
GGAAAGCAGAAGGATAAGTGTAGACGAGTGAGCTTCACTGATCATGTGGAGGTGTTTAAT
ATAGGTGGTAGTGATGATGTAGAGGGTGATGGGAGTGGTGAAACTGAACTTGTGCATGGA
CGACGGTTTAGCCCTGAGGAAGATGCAAAGCTAATGGAAGCGATATTGAAATATGCAGAG
TTGAAGCAATTAGGAGAGAAAGGGTTACAGATGATTGGGGAAAGTAATAAGCATCCAGAG
ACCAGGGGTTGTTGGGCTGAAATAGGAAAAGCATTACCTCATAGACCCAAGAAAGCCAAA
TACGCGCGTGGAAAGGTTTTACTTCAAAGGAGTGCTGAACGTAAATGGACCGCTGAGGAG
TATGAGATAATTCGACGGTTTGTTGAAAAGAACGGCCGAAATTGGAAGGTATTAGCAAAA
GAACTTGGAAAGAGTGAAATCCATGTAAAAGATACTTGGAGACGAATAAAGTTCAAAAAT
TTGAAAAGAGGGACTTGGAGTCAGGATGAGTACCAAAACTTGTTTGATTTGGTAAATCTG
GACATGCGTGTGAAAGCCCATCAAAACATCAATACTGGTCACCGTCATATAAGAGATAAC
ATTTCTTGGGAGGCTATCAGTGAAAAATTAACCACTCGTAGAGCCGAAGAATGCTGCACG
AAATGGTACGGGCAATTGGCATCGCCGCTGGTTAAACAAGGAATCTGGGCAGATACAGAT
GACTACATGTTAGTGGAAGCGTAA

Peptide Sequence

PEP ID

Zm00001d049495_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:4:32390404:32404654:1 gene:Zm00001d049495 transcript:Zm00001d049495_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 83 description:Putative MYB DNA-binding domain superfamily protein

Sequence

MEQADVSAKMAEDSCLEHAEAVTSKSSAKKHRKKKRKDKEVETIGQKQILDADENVGSED
TKRNSREREHDRKSKKHKRKHQDDETASNGSSGNQIVLGEDKRTEKEYLVTLDLEEDNKS
DMSKIGKKTDSKKKRRKERNDGVDLRQNTLVGEGKNGKNNKEKKMCEDENGGGEREKENM
GKQKDKCRRVSFTDHVEVFNIGGSDDVEGDGSGETELVHGRRFSPEEDAKLMEAILKYAE
LKQLGEKGLQMIGESNKHPETRGCWAEIGKALPHRPKKAKYARGKVLLQRSAERKWTAEE
YEIIRRFVEKNGRNWKVLAKELGKSEIHVKDTWRRIKFKNLKRGTWSQDEYQNLFDLVNL
DMRVKAHQNINTGHRHIRDNISWEAISEKLTTRRAEECCTKWYGQLASPLVKQGIWADTD
DYMLVEA

Transcript Sequence

Transcript ID

Zm00001d049495_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:32390404:32404654:1 gene:Zm00001d049495 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 83 description:Putative MYB DNA-binding domain superfamily protein

Sequence

ACTGCCAAGTAACCGAAGAAGAGAAGAAACGGAAGAAGGGGAAGAAGCATAAGGACAAGG
GTCAGGGCAGCAATTCTGATAGCTCATGTGCCAGGAACCATAGCATTGAGATGGAGCAAG
CTGATGTGTCAGCCAAGATGGCTGAAGACTCCTGCTTGGAGCATGCAGAGGCTGTTACGA
GCAAAAGCTCTGCGAAGAAACACAGGAAGAAAAAGAGGAAAGATAAAGAGGTTGAAACTA
TTGGCCAGAAGCAGATACTCGATGCTGATGAAAATGTTGGGTCAGAAGATACGAAGAGGA
ACAGCAGAGAAAGGGAACATGATAGGAAGTCAAAGAAGCACAAACGAAAGCATCAGGATG
ACGAGACTGCCTCAAATGGTTCTTCTGGTAATCAAATTGTTTTAGGGGAAGATAAGAGGA
CGGAAAAAGAGTATTTAGTTACCTTGGATTTGGAAGAGGACAATAAATCTGATATGTCAA
AGATTGGGAAGAAGACAGATAGCAAGAAGAAGAGGAGAAAAGAGAGAAATGATGGTGTTG
ACCTAAGACAAAATACACTAGTTGGAGAGGGCAAGAATGGTAAGAATAACAAAGAGAAAA
AAATGTGTGAGGATGAGAATGGTGGCGGTGAAAGAGAGAAAGAAAACATGGGAAAGCAGA
AGGATAAGTGTAGACGAGTGAGCTTCACTGATCATGTGGAGGTGTTTAATATAGGTGGTA
GTGATGATGTAGAGGGTGATGGGAGTGGTGAAACTGAACTTGTGCATGGACGACGGTTTA
GCCCTGAGGAAGATGCAAAGCTAATGGAAGCGATATTGAAATATGCAGAGTTGAAGCAAT
TAGGAGAGAAAGGGTTACAGATGATTGGGGAAAGTAATAAGCATCCAGAGACCAGGGGTT
GTTGGGCTGAAATAGGAAAAGCATTACCTCATAGACCCAAGAAAGCCAAATACGCGCGTG
GAAAGGTTTTACTTCAAAGGAGTGCTGAACGTAAATGGACCGCTGAGGAGTATGAGATAA
TTCGACGGTTTGTTGAAAAGAACGGCCGAAATTGGAAGGTATTAGCAAAAGAACTTGGAA
AGAGTGAAATCCATGTAAAAGATACTTGGAGACGAATAAAGTTCAAAAATTTGAAAAGAG
GGACTTGGAGTCAGGATGAGTACCAAAACTTGTTTGATTTGGTAAATCTGGACATGCGTG
TGAAAGCCCATCAAAACATCAATACTGGTCACCGTCATATAAGAGATAACATTTCTTGGG
AGGCTATCAGTGAAAAATTAACCACTCGTAGAGCCGAAGAATGCTGCACGAAATGGTACG
GGCAATTGGCATCGCCGCTGGTTAAACAAGGAATCTGGGCAGATACAGATGACTACATGT
TAGTGGAAGCGTAAGTTTCTATGGGTTACCTATCGAATACGGTACTACTGTCATAAGAAA
ATGTCATCTTGTCTTTGGGATTGTGACTGTGGTGTGGCCTGAAAGTGCCTCTGAACTGAG
GCTTCAAAATGTCGATGCTGTTTGTGCTGAAGATGTGGACTGGGAGAACCTTCTCGAGCA
CAGGTCTGGGGAGCTTTGCCGTCATAGATGGAACCAGATGATTCGCCTGATGGGTGACCA
CAGATATAGGCCTTTCATTGAGCAAGTGGAAGTGCTTGCAAGGCGGTACTGCCCAGAGAT
GCTTGCGTACAGGAAACCAGTCGCAGGTGGATCCTCGGCCGACGAACCTGCTGGAGCCTC
TGACTTGTAATATGGGATCTTTAGAAACGTTAGCAGCATATGGTTCTAGAGCTGCCAAGG
GTGTCGTCAGCACTCTGATCTCAACAAACTTTGGTATTGTTGAGGGCTTATGTATCTTCT
GGATTTGAAATCACGGATGTTTTATCGCCCAACTAAT