Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049494_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:32383217:32386961:-1 gene:Zm00001d049494 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sigma factor 1B description:sigma factor 1B
Sequence	ATGACCGCGACGCCGGCAGTGATCGGGCTGAGCGCTGGGCACCGCCTCCTCGCCACCTCG TTCGGCTCCCCCGACCTCGCGTCCCCGGACGCGCACTCGTCGCTGCAGTTCGCGGCCGCC GCACCGAAGCTCACCGTCGTCGCGCACCGCGCCCCCGCCTCCTCTTCCTCCTCCTCTCCG CCCAACGTCGGGCGCGGCTCTTCCGCCGCCGGCCACGCGCGCGCGCGCGCCATCCGGGCG CTCAGGAACCACTCCGCGCCCGCGCTCGCCACGCCACCGCCGCCTCCTCTACCGGCGGAC CCGACTCCGGACCTAGACTCGGAGTTCGAGTCCTCGCTCGAGGCCATCGTGCTGCTGCAG CGCTCCATGCTCGAGAAGCAGTGGGAGCTCCCCTTCGAGGACGACATCATTTCCACTGAC GACGAGCAGGACGACAGGGTTAGCAAGGCCACGGTGGTGGCGGCGCGGTCGGGCGTCTCG GCGCGGCAGCGGCGGATGAGCGGCCGGCGGCGGGGAGCTGGTCGGAAGAGCGTTGCCATC AGCCCGGAGCTGATGCAGAGCCGGAACCGCATCTACCTCAGGGGCACCGTCAGCAAGGAC CTCCTCACGCACAAGCAGGTCATCCAGCTCTCCAGGAAGATCAAGGACGGCATCTGGCTT CAGCACCAAAGATCAAAGCTGAAGGAGAAACTGGGGAACGAGCCATCATACAAGCAGCTG GCACAGTCACTGCGGATATCAGCTCCTGAACTGCGCGCAAGGATGCGCGAGTCGTTTCTC GCGAGGGAGATGCTGACAATGAGCAACATCCGTCTGGTCATATCCATTGCCCACAAGTAT GATAACCTCGGTGTCGACTTGGCAGACCTTATTCAGGGTGGTCTGATAGGGCTACTCCGA GGGATCGAAAAATTTGATGCATCGAGGGGATTCAGGATTTCCACCTATGTGTATTGGTGG ATTCGTCAGGGTGTTTCAAGAGCATTGGCTGATAACTCAAAAACGTTCAGGCTCCCTACG TATTTGCACGAGAGGTTGATAGCAATTCGTGGTGCAAAGTACGCGTTAGAGGATCAAGGA ATTGCTCCGACAATAGAGAACATAGCAGAGTCGCTCAATATATCGGAAAAGAAAGTGCAC AATGCTACAGAGGCTGTGAACAAGGTTCTTTCACTGGATCAACAGGCGTTCCCCTCCTTA AACGGTCTACCTGGGGACACACTCCATAGTTACATAGAGGATCAAAACGTCGCAAATGAT CCATGGCATGGATTTGAGGAAATGTATCTCAAGGAGGAAGTTAACAATCTTATAAATTCA AACCTCAACGAGCGTGAGAGGGACATTATTCGATTATACCATGGCATAGGAAAACAGTGC CATACATGGGAGGATATTAGCAGACAATTTGGGTTGTCGAGGGAGCGTGTGAGGCAAGTA GGACTCGTTGCGATGGAGAAGCTGAAGCATGCTGCGAGGAGGAAGCATTTGGATGCATTG CTTGAGGATTATTGA

Peptide Sequence

PEP ID	Zm00001d049494_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:32383217:32386961:-1 gene:Zm00001d049494 transcript:Zm00001d049494_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sigma factor 1B description:sigma factor 1B
Sequence	MTATPAVIGLSAGHRLLATSFGSPDLASPDAHSSLQFAAAAPKLTVVAHRAPASSSSSSP PNVGRGSSAAGHARARAIRALRNHSAPALATPPPPPLPADPTPDLDSEFESSLEAIVLLQ RSMLEKQWELPFEDDIISTDDEQDDRVSKATVVAARSGVSARQRRMSGRRRGAGRKSVAI SPELMQSRNRIYLRGTVSKDLLTHKQVIQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQL AQSLRISAPELRARMRESFLAREMLTMSNIRLVISIAHKYDNLGVDLADLIQGGLIGLLR GIEKFDASRGFRISTYVYWWIRQGVSRALADNSKTFRLPTYLHERLIAIRGAKYALEDQG IAPTIENIAESLNISEKKVHNATEAVNKVLSLDQQAFPSLNGLPGDTLHSYIEDQNVAND PWHGFEEMYLKEEVNNLINSNLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQV GLVAMEKLKHAARRKHLDALLEDY

Transcript Sequence

Transcript ID	Zm00001d049494_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:32383217:32386961:-1 gene:Zm00001d049494 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sigma factor 1B description:sigma factor 1B
Sequence	ACCAGGCTCCAGAGCGACGAGCCCGATGGGCGTCGTGTGGTCGGCGTGCCGCGTGGAGGA GGCAGCGTGATCTTTCTATTGCCGCCCTGGCCGATCTCGTGGCGGAGGCACGACCGCAGC AGGCAACGACGAGCCGAGCGGAAAGCGACGAGGGGCAGCCACAATATCTTCCGCCCACCA ATGGCCTCGCGCTCCCTCGCTCCTCGCTGCCCGCACCCTATCCTCTCCTCTCCTCCTTCA CCGGCTCCGAACGCTCACCCGCACCTCCATGCCGCGCGCGCGCGGTAACACACCTCCGTG AGTCTCCTCTTGCTCGTAGTAAAACACTAGCGGACCAGAAAACGCCTCTCTATCTCTCTT TCCTCGTCAGTCCCTCTCTCTCGGCGTGTGGTGGGCATAGCTTCCCTGCCTCCACTTGTC TTCTTTGTTTCCTCTGCTGAGGGCTAGTAGGATCAGTTCAGTTCCTCGCCGCCGGTCTCC TACTGCGTGCACTTCTGCTGCCTGCTGTCCTAGCCCTGTACCGCCGACTCTACTGTACCT CATCATTCGCCTTGCTGCATCCGCCGCCTCGGTCGCGCAGGTGAAGCGGACGCCATGACC GCGACGCCGGCAGTGATCGGGCTGAGCGCTGGGCACCGCCTCCTCGCCACCTCGTTCGGC TCCCCCGACCTCGCGTCCCCGGACGCGCACTCGTCGCTGCAGTTCGCGGCCGCCGCACCG AAGCTCACCGTCGTCGCGCACCGCGCCCCCGCCTCCTCTTCCTCCTCCTCTCCGCCCAAC GTCGGGCGCGGCTCTTCCGCCGCCGGCCACGCGCGCGCGCGCGCCATCCGGGCGCTCAGG AACCACTCCGCGCCCGCGCTCGCCACGCCACCGCCGCCTCCTCTACCGGCGGACCCGACT CCGGACCTAGACTCGGAGTTCGAGTCCTCGCTCGAGGCCATCGTGCTGCTGCAGCGCTCC ATGCTCGAGAAGCAGTGGGAGCTCCCCTTCGAGGACGACATCATTTCCACTGACGACGAG CAGGACGACAGGGTTAGCAAGGCCACGGTGGTGGCGGCGCGGTCGGGCGTCTCGGCGCGG CAGCGGCGGATGAGCGGCCGGCGGCGGGGAGCTGGTCGGAAGAGCGTTGCCATCAGCCCG GAGCTGATGCAGAGCCGGAACCGCATCTACCTCAGGGGCACCGTCAGCAAGGACCTCCTC ACGCACAAGCAGGTCATCCAGCTCTCCAGGAAGATCAAGGACGGCATCTGGCTTCAGCAC CAAAGATCAAAGCTGAAGGAGAAACTGGGGAACGAGCCATCATACAAGCAGCTGGCACAG TCACTGCGGATATCAGCTCCTGAACTGCGCGCAAGGATGCGCGAGTCGTTTCTCGCGAGG GAGATGCTGACAATGAGCAACATCCGTCTGGTCATATCCATTGCCCACAAGTATGATAAC CTCGGTGTCGACTTGGCAGACCTTATTCAGGGTGGTCTGATAGGGCTACTCCGAGGGATC GAAAAATTTGATGCATCGAGGGGATTCAGGATTTCCACCTATGTGTATTGGTGGATTCGT CAGGGTGTTTCAAGAGCATTGGCTGATAACTCAAAAACGTTCAGGCTCCCTACGTATTTG CACGAGAGGTTGATAGCAATTCGTGGTGCAAAGTACGCGTTAGAGGATCAAGGAATTGCT CCGACAATAGAGAACATAGCAGAGTCGCTCAATATATCGGAAAAGAAAGTGCACAATGCT ACAGAGGCTGTGAACAAGGTTCTTTCACTGGATCAACAGGCGTTCCCCTCCTTAAACGGT CTACCTGGGGACACACTCCATAGTTACATAGAGGATCAAAACGTCGCAAATGATCCATGG CATGGATTTGAGGAAATGTATCTCAAGGAGGAAGTTAACAATCTTATAAATTCAAACCTC AACGAGCGTGAGAGGGACATTATTCGATTATACCATGGCATAGGAAAACAGTGCCATACA TGGGAGGATATTAGCAGACAATTTGGGTTGTCGAGGGAGCGTGTGAGGCAAGTAGGACTC GTTGCGATGGAGAAGCTGAAGCATGCTGCGAGGAGGAAGCATTTGGATGCATTGCTTGAG GATTATTGAGTGAGATGTTTTTCGTTTACACAAATGCAGTGGCTGTATATACTCGGAAAC ATAGGGTTCATCATCCTTGAAAGGCTTTACCGCTACTCACTCGGCAGATAACTATACATG TACATTTGTGACAATCAATAGGCACGATTCAGATATCTATGTCT